PCHAS_1302900 | lysophospholipase, putative

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1302900OTHER0.9999030.0000680.000029
No Results

  • Fasta :-

    >PCHAS_1302900 MEEIELNGDELRNTACNLDGNPKVGWLCNKNGLLLKTYEWVTHGAIGIILLIHGLKAHTR LTFMKINLKMPNANEGLVIDTDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSWRNIR GDFKYYDDLVDDVLQYMNQIHDEISNDNQMNEESHNIVATKKERLPMYIMGHSMGGTIAL RILQLLKKKQEDKIKMRDSNSYKSGNAMLNDSTNVNKIGNNVVEDMINDKYDMDNTHFIT NSSDYYSDNSCASTCASTSASISATANVVVSSKDEECYNYLDKFNIKGCIALSGMMRAKT PLGSGNRSIKYLYLPIANFMSRVAPRLLVSRESHYKRSEYVANICKYDKFRNNNGVRFKC FAELMRAMIKLHCDINYMPENVPLLFVHSKDDTICCYKAAYSFYNKAKVPGKKFHTVDDM GHAITAEEGNEDILNEILNWISYGKTNYEDIKEGEKEGEKKIKKNAKKKVKKKTK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1302900.fa Sequence name : PCHAS_1302900 Sequence length : 475 VALUES OF COMPUTED PARAMETERS Coef20 : 3.033 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.312 1.471 0.291 0.664 MesoH : -0.618 0.180 -0.330 0.201 MuHd_075 : 20.062 14.026 5.733 4.340 MuHd_095 : 27.286 17.562 8.865 4.712 MuHd_100 : 34.509 20.961 9.221 6.126 MuHd_105 : 34.121 18.739 7.381 6.137 Hmax_075 : -6.767 5.017 -3.057 2.310 Hmax_095 : 1.600 9.600 1.214 3.180 Hmax_100 : 9.900 11.900 0.792 4.560 Hmax_105 : 9.713 9.800 0.620 3.946 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9462 0.0538 DFMC : 0.9725 0.0275
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 475 PCHAS_1302900 MEEIELNGDELRNTACNLDGNPKVGWLCNKNGLLLKTYEWVTHGAIGIILLIHGLKAHTRLTFMKINLKMPNANEGLVID 80 TDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSWRNIRGDFKYYDDLVDDVLQYMNQIHDEISNDNQMNEESHNIVAT 160 KKERLPMYIMGHSMGGTIALRILQLLKKKQEDKIKMRDSNSYKSGNAMLNDSTNVNKIGNNVVEDMINDKYDMDNTHFIT 240 NSSDYYSDNSCASTCASTSASISATANVVVSSKDEECYNYLDKFNIKGCIALSGMMRAKTPLGSGNRSIKYLYLPIANFM 320 SRVAPRLLVSRESHYKRSEYVANICKYDKFRNNNGVRFKCFAELMRAMIKLHCDINYMPENVPLLFVHSKDDTICCYKAA 400 YSFYNKAKVPGKKFHTVDDMGHAITAEEGNEDILNEILNWISYGKTNYEDIKEGEKEGEKKIKKNAKKKVKKKTK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1302900 12 LNGDELR|NT 0.091 . PCHAS_1302900 23 NLDGNPK|VG 0.055 . PCHAS_1302900 30 VGWLCNK|NG 0.053 . PCHAS_1302900 36 KNGLLLK|TY 0.071 . PCHAS_1302900 56 LLIHGLK|AH 0.059 . PCHAS_1302900 60 GLKAHTR|LT 0.110 . PCHAS_1302900 65 TRLTFMK|IN 0.077 . PCHAS_1302900 69 FMKINLK|MP 0.059 . PCHAS_1302900 88 DNYYIYK|DS 0.072 . PCHAS_1302900 94 KDSWIEK|FN 0.080 . PCHAS_1302900 117 GESQSWR|NI 0.133 . PCHAS_1302900 120 QSWRNIR|GD 0.348 . PCHAS_1302900 124 NIRGDFK|YY 0.075 . PCHAS_1302900 161 HNIVATK|KE 0.060 . PCHAS_1302900 162 NIVATKK|ER 0.082 . PCHAS_1302900 164 VATKKER|LP 0.084 . PCHAS_1302900 181 GGTIALR|IL 0.065 . PCHAS_1302900 187 RILQLLK|KK 0.052 . PCHAS_1302900 188 ILQLLKK|KQ 0.112 . PCHAS_1302900 189 LQLLKKK|QE 0.094 . PCHAS_1302900 193 KKKQEDK|IK 0.060 . PCHAS_1302900 195 KQEDKIK|MR 0.062 . PCHAS_1302900 197 EDKIKMR|DS 0.110 . PCHAS_1302900 203 RDSNSYK|SG 0.116 . PCHAS_1302900 217 DSTNVNK|IG 0.065 . PCHAS_1302900 230 EDMINDK|YD 0.066 . PCHAS_1302900 273 NVVVSSK|DE 0.063 . PCHAS_1302900 283 CYNYLDK|FN 0.070 . PCHAS_1302900 287 LDKFNIK|GC 0.069 . PCHAS_1302900 297 ALSGMMR|AK 0.110 . PCHAS_1302900 299 SGMMRAK|TP 0.069 . PCHAS_1302900 307 PLGSGNR|SI 0.090 . PCHAS_1302900 310 SGNRSIK|YL 0.159 . PCHAS_1302900 322 IANFMSR|VA 0.100 . PCHAS_1302900 326 MSRVAPR|LL 0.108 . PCHAS_1302900 331 PRLLVSR|ES 0.091 . PCHAS_1302900 336 SRESHYK|RS 0.069 . PCHAS_1302900 337 RESHYKR|SE 0.354 . PCHAS_1302900 346 YVANICK|YD 0.056 . PCHAS_1302900 349 NICKYDK|FR 0.061 . PCHAS_1302900 351 CKYDKFR|NN 0.108 . PCHAS_1302900 357 RNNNGVR|FK 0.122 . PCHAS_1302900 359 NNGVRFK|CF 0.071 . PCHAS_1302900 366 CFAELMR|AM 0.081 . PCHAS_1302900 370 LMRAMIK|LH 0.066 . PCHAS_1302900 390 LLFVHSK|DD 0.070 . PCHAS_1302900 398 DTICCYK|AA 0.061 . PCHAS_1302900 406 AYSFYNK|AK 0.067 . PCHAS_1302900 408 SFYNKAK|VP 0.115 . PCHAS_1302900 412 KAKVPGK|KF 0.080 . PCHAS_1302900 413 AKVPGKK|FH 0.103 . PCHAS_1302900 445 NWISYGK|TN 0.060 . PCHAS_1302900 452 TNYEDIK|EG 0.069 . PCHAS_1302900 456 DIKEGEK|EG 0.055 . PCHAS_1302900 460 GEKEGEK|KI 0.054 . PCHAS_1302900 461 EKEGEKK|IK 0.096 . PCHAS_1302900 463 EGEKKIK|KN 0.071 . PCHAS_1302900 464 GEKKIKK|NA 0.117 . PCHAS_1302900 467 KIKKNAK|KK 0.071 . PCHAS_1302900 468 IKKNAKK|KV 0.176 . PCHAS_1302900 469 KKNAKKK|VK 0.116 . PCHAS_1302900 471 NAKKKVK|KK 0.075 . PCHAS_1302900 472 AKKKVKK|KT 0.125 . PCHAS_1302900 473 KKKVKKK|TK 0.136 . PCHAS_1302900 475 KVKKKTK|-- 0.076 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1302900 ATGGAAGAAATTGAATTGAATGGTGATGAATTAAGAAATACAGCATGTAATTTAGATGGT AATCCTAAGGTAGGCTGGTTATGTAATAAAAATGGTTTACTTTTAAAAACATATGAGTGG GTAACTCATGGTGCTATAGGAATTATATTGTTAATACATGGGCTGAAAGCTCATACTCGA TTAACTTTTATGAAAATAAATTTAAAAATGCCAAATGCCAATGAAGGCTTAGTAATAGAC ACTGATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATGGTTAT TCAGTATATGCACTAGATTTCCAAGGGCATGGCGAATCGCAATCGTGGAGAAATATAAGA GGCGATTTTAAGTATTATGATGATCTGGTTGATGATGTATTACAATATATGAATCAAATT CATGATGAAATCTCAAATGATAATCAAATGAATGAAGAATCCCATAATATAGTAGCAACT AAAAAAGAAAGGCTTCCTATGTATATTATGGGGCATTCGATGGGGGGAACTATTGCTTTA AGAATATTACAATTATTAAAGAAAAAGCAAGAAGATAAAATTAAGATGCGAGATTCAAAT AGCTATAAAAGTGGTAACGCCATGTTAAACGATTCTACTAATGTAAATAAAATTGGCAAT AATGTGGTAGAAGATATGATTAATGATAAGTATGATATGGATAATACCCATTTCATTACC AATTCTAGTGATTATTATTCCGATAATTCCTGTGCTAGTACCTGTGCTAGTACCTCCGCT AGCATCTCTGCTACAGCAAATGTTGTTGTTAGTAGTAAAGATGAAGAATGTTATAATTAT TTAGATAAATTTAATATTAAAGGATGTATAGCTTTATCTGGTATGATGAGAGCAAAAACA CCATTGGGTTCGGGGAATAGATCAATTAAGTATTTGTATTTACCTATAGCAAACTTTATG TCTCGTGTCGCGCCTCGTCTATTAGTTTCGAGAGAATCACATTATAAAAGGTCCGAATAT GTTGCTAATATATGTAAATATGATAAATTTCGAAATAATAATGGGGTAAGATTTAAATGC TTCGCTGAACTTATGAGAGCAATGATCAAATTGCATTGTGATATTAATTATATGCCAGAA AATGTTCCTTTATTATTTGTGCATTCAAAAGATGATACTATTTGTTGCTATAAAGCGGCA TATTCATTTTATAATAAAGCAAAAGTTCCTGGAAAAAAATTCCATACGGTTGATGATATG GGTCATGCTATAACGGCAGAGGAAGGGAATGAAGATATTTTAAACGAAATTCTTAATTGG ATTTCTTATGGAAAAACCAATTATGAAGACATAAAAGAAGGTGAAAAAGAAGGCGAAAAG AAGATTAAAAAGAATGCAAAAAAGAAGGTGAAAAAAAAGACGAAATAG
  • Download Fasta

  • Fasta :-

    MEEIELNGDELRNTACNLDGNPKVGWLCNKNGLLLKTYEWVTHGAIGIILLIHGLKAHTR LTFMKINLKMPNANEGLVIDTDNYYIYKDSWIEKFNQNGYSVYALDFQGHGESQSWRNIR GDFKYYDDLVDDVLQYMNQIHDEISNDNQMNEESHNIVATKKERLPMYIMGHSMGGTIAL RILQLLKKKQEDKIKMRDSNSYKSGNAMLNDSTNVNKIGNNVVEDMINDKYDMDNTHFIT NSSDYYSDNSCASTCASTSASISATANVVVSSKDEECYNYLDKFNIKGCIALSGMMRAKT PLGSGNRSIKYLYLPIANFMSRVAPRLLVSRESHYKRSEYVANICKYDKFRNNNGVRFKC FAELMRAMIKLHCDINYMPENVPLLFVHSKDDTICCYKAAYSFYNKAKVPGKKFHTVDDM GHAITAEEGNEDILNEILNWISYGKTNYEDIKEGEKEGEKKIKKNAKKKVKKKTK

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1302900271 SNVVVSSKDE0.998unsp

PCHAS_130290      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India