PCHAS_1308800 | mitochondrial inner membrane protease ATP23, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1308800OTHER0.9999400.0000080.000053
No Results

  • Fasta :-

    >PCHAS_1308800 MMDELQNLVEKIKKCIQNVDNKIKNGDLRKNIEKFLLNNRTEKSQFNDMVSLIQYSLKYK DVCNWPNYNDLFIINYNINNNFKSIIQKNENFLRQYKNHTSNEYEENVTTESSIKNDMKT TNPINTDKNISLAMDNEMNNKKNVPSFTEHNKVSENNQDNIAGKGNNSMDQNLVDKIKLN SKGANTNPKLNNINIQYNDDITLFNKLKLQTFMYFVRNNYKVKLLIDSLSAMNHPINIIY INCPNNKYKKKNIFQKISDLFLPDYKVNDEFVNSKYNYQKNNCSCSELPLNPLSNNNYAY TQKKNVSNYTGGYNPISNTVWLCANNITNLYKLKYILTHELIHAFDFARANIDMYNCHHI ACSEIRAYNMSNQCGYFNSKHFLPNRDVFNHFKAPSINDTAKNKCVYNNTYTSLYQYKPC ANNTHKYINDVFEKCIHDYWPFMCAPEQDSKYKPSKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1308800.fa Sequence name : PCHAS_1308800 Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 3.368 CoefTot : 0.000 ChDiff : 14 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.288 0.918 -0.174 0.448 MesoH : -0.841 -0.112 -0.493 0.123 MuHd_075 : 20.014 9.040 5.766 2.535 MuHd_095 : 46.698 35.539 14.422 10.219 MuHd_100 : 55.987 40.755 17.209 11.507 MuHd_105 : 54.312 38.615 17.094 10.726 Hmax_075 : -5.700 5.833 -2.511 2.010 Hmax_095 : 9.600 19.200 2.688 6.000 Hmax_100 : 21.200 25.200 5.851 7.380 Hmax_105 : 20.100 25.200 6.099 7.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6022 0.3978 DFMC : 0.8450 0.1550
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 PCHAS_1308800 MMDELQNLVEKIKKCIQNVDNKIKNGDLRKNIEKFLLNNRTEKSQFNDMVSLIQYSLKYKDVCNWPNYNDLFIINYNINN 80 NFKSIIQKNENFLRQYKNHTSNEYEENVTTESSIKNDMKTTNPINTDKNISLAMDNEMNNKKNVPSFTEHNKVSENNQDN 160 IAGKGNNSMDQNLVDKIKLNSKGANTNPKLNNINIQYNDDITLFNKLKLQTFMYFVRNNYKVKLLIDSLSAMNHPINIIY 240 INCPNNKYKKKNIFQKISDLFLPDYKVNDEFVNSKYNYQKNNCSCSELPLNPLSNNNYAYTQKKNVSNYTGGYNPISNTV 320 WLCANNITNLYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCGYFNSKHFLPNRDVFNHFKAPSINDT 400 AKNKCVYNNTYTSLYQYKPCANNTHKYINDVFEKCIHDYWPFMCAPEQDSKYKPSKT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1308800 11 LQNLVEK|IK 0.064 . PCHAS_1308800 13 NLVEKIK|KC 0.066 . PCHAS_1308800 14 LVEKIKK|CI 0.096 . PCHAS_1308800 22 IQNVDNK|IK 0.063 . PCHAS_1308800 24 NVDNKIK|NG 0.060 . PCHAS_1308800 29 IKNGDLR|KN 0.095 . PCHAS_1308800 30 KNGDLRK|NI 0.099 . PCHAS_1308800 34 LRKNIEK|FL 0.069 . PCHAS_1308800 40 KFLLNNR|TE 0.065 . PCHAS_1308800 43 LNNRTEK|SQ 0.188 . PCHAS_1308800 58 LIQYSLK|YK 0.071 . PCHAS_1308800 60 QYSLKYK|DV 0.104 . PCHAS_1308800 83 NINNNFK|SI 0.107 . PCHAS_1308800 88 FKSIIQK|NE 0.061 . PCHAS_1308800 94 KNENFLR|QY 0.092 . PCHAS_1308800 97 NFLRQYK|NH 0.096 . PCHAS_1308800 115 TTESSIK|ND 0.060 . PCHAS_1308800 119 SIKNDMK|TT 0.079 . PCHAS_1308800 128 NPINTDK|NI 0.078 . PCHAS_1308800 141 DNEMNNK|KN 0.061 . PCHAS_1308800 142 NEMNNKK|NV 0.106 . PCHAS_1308800 152 SFTEHNK|VS 0.066 . PCHAS_1308800 164 QDNIAGK|GN 0.075 . PCHAS_1308800 176 DQNLVDK|IK 0.060 . PCHAS_1308800 178 NLVDKIK|LN 0.078 . PCHAS_1308800 182 KIKLNSK|GA 0.068 . PCHAS_1308800 189 GANTNPK|LN 0.069 . PCHAS_1308800 206 DITLFNK|LK 0.056 . PCHAS_1308800 208 TLFNKLK|LQ 0.061 . PCHAS_1308800 217 TFMYFVR|NN 0.096 . PCHAS_1308800 221 FVRNNYK|VK 0.054 . PCHAS_1308800 223 RNNYKVK|LL 0.090 . PCHAS_1308800 247 INCPNNK|YK 0.072 . PCHAS_1308800 249 CPNNKYK|KK 0.082 . PCHAS_1308800 250 PNNKYKK|KN 0.106 . PCHAS_1308800 251 NNKYKKK|NI 0.185 . PCHAS_1308800 256 KKNIFQK|IS 0.082 . PCHAS_1308800 266 LFLPDYK|VN 0.056 . PCHAS_1308800 275 DEFVNSK|YN 0.071 . PCHAS_1308800 280 SKYNYQK|NN 0.063 . PCHAS_1308800 303 NYAYTQK|KN 0.061 . PCHAS_1308800 304 YAYTQKK|NV 0.180 . PCHAS_1308800 332 NITNLYK|LK 0.061 . PCHAS_1308800 334 TNLYKLK|YI 0.080 . PCHAS_1308800 349 HAFDFAR|AN 0.110 . PCHAS_1308800 366 IACSEIR|AY 0.098 . PCHAS_1308800 380 CGYFNSK|HF 0.062 . PCHAS_1308800 386 KHFLPNR|DV 0.168 . PCHAS_1308800 393 DVFNHFK|AP 0.066 . PCHAS_1308800 402 SINDTAK|NK 0.081 . PCHAS_1308800 404 NDTAKNK|CV 0.077 . PCHAS_1308800 418 TSLYQYK|PC 0.066 . PCHAS_1308800 426 CANNTHK|YI 0.087 . PCHAS_1308800 434 INDVFEK|CI 0.077 . PCHAS_1308800 451 APEQDSK|YK 0.060 . PCHAS_1308800 453 EQDSKYK|PS 0.071 . PCHAS_1308800 456 SKYKPSK|T- 0.074 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1308800 ATGATGGATGAACTACAAAATTTAGTGGAAAAAATAAAAAAGTGTATTCAAAATGTCGAT AATAAAATTAAAAATGGTGATTTAAGAAAAAATATAGAAAAGTTTCTTTTAAATAATAGA ACAGAGAAGAGCCAATTTAATGATATGGTATCCTTAATACAATATTCGCTTAAGTATAAA GATGTATGTAATTGGCCTAATTACAACGATTTATTTATTATAAATTATAATATAAATAAT AATTTCAAATCAATTATACAAAAAAATGAAAATTTTCTTCGCCAATACAAAAATCATACG TCTAATGAGTACGAAGAAAATGTAACCACAGAAAGCAGCATAAAAAACGACATGAAAACA ACAAACCCAATTAATACTGATAAAAATATATCCTTAGCTATGGATAACGAAATGAATAAT AAAAAAAATGTTCCATCCTTTACCGAACATAATAAAGTTAGTGAAAATAACCAGGATAAT ATTGCAGGCAAGGGCAATAATAGTATGGATCAAAACTTAGTGGACAAAATTAAACTCAAT TCCAAGGGCGCTAATACAAATCCAAAACTAAACAACATTAATATACAATATAATGATGAT ATAACTCTATTTAATAAGCTAAAATTACAAACATTTATGTATTTTGTACGAAATAATTAC AAAGTAAAACTATTAATCGATTCACTGTCAGCAATGAACCATCCAATAAATATAATATAT ATAAATTGCCCAAATAATAAATATAAAAAAAAAAACATTTTTCAAAAAATTAGTGACTTA TTTCTGCCTGATTATAAAGTTAATGATGAATTTGTTAACAGTAAATATAATTATCAAAAA AATAATTGCTCATGCTCTGAATTGCCATTAAACCCCTTAAGTAATAATAATTATGCATAT ACACAAAAAAAAAATGTGTCCAATTATACGGGTGGTTATAATCCTATAAGTAACACTGTA TGGCTTTGTGCAAATAATATTACTAATTTATATAAATTAAAATATATATTAACACATGAA CTTATTCATGCCTTTGATTTTGCTAGAGCAAACATCGACATGTATAATTGCCATCACATT GCTTGCTCAGAAATAAGAGCTTACAACATGAGCAATCAATGTGGCTACTTTAATAGTAAA CATTTTTTACCCAATAGGGATGTTTTTAATCATTTTAAAGCACCGTCAATTAATGATACT GCAAAAAATAAATGTGTATATAATAATACATACACATCATTATATCAATATAAGCCATGT GCTAATAATACTCATAAATATATAAATGATGTTTTTGAAAAATGTATACATGATTATTGG CCATTCATGTGTGCACCGGAACAAGACAGTAAATATAAGCCATCCAAAACTTAA
  • Download Fasta

  • Fasta :-

    MMDELQNLVEKIKKCIQNVDNKIKNGDLRKNIEKFLLNNRTEKSQFNDMVSLIQYSLKYK DVCNWPNYNDLFIINYNINNNFKSIIQKNENFLRQYKNHTSNEYEENVTTESSIKNDMKT TNPINTDKNISLAMDNEMNNKKNVPSFTEHNKVSENNQDNIAGKGNNSMDQNLVDKIKLN SKGANTNPKLNNINIQYNDDITLFNKLKLQTFMYFVRNNYKVKLLIDSLSAMNHPINIIY INCPNNKYKKKNIFQKISDLFLPDYKVNDEFVNSKYNYQKNNCSCSELPLNPLSNNNYAY TQKKNVSNYTGGYNPISNTVWLCANNITNLYKLKYILTHELIHAFDFARANIDMYNCHHI ACSEIRAYNMSNQCGYFNSKHFLPNRDVFNHFKAPSINDTAKNKCVYNNTYTSLYQYKPC ANNTHKYINDVFEKCIHDYWPFMCAPEQDSKYKPSKT

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PCHAS_130880      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India