PCHAS_1333700 | plasmepsin VIII, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1333700SP0.0092130.9903960.000390CS pos: 21-22. VKS-LT. Pr: 0.7789
No Results

  • Fasta :-

    >PCHAS_1333700 MNIFFVFPLFLILNFIVLVKSLTENLRVSRYSKPGVSTIILKGGYINRQFIGEISIGNPP QSFKVLFDTGSTNLWIPSKNCYAKACYNKKKYDHNISKNYRISSQKNPVNIFFGTGKVQI AYATDDIHLGSIKVRDQEFGIANYMSDDPFSDMQFDGLFGLGISEDIKRKELIYDNIPKN SSRKNMFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFAVSSKKYWTIKMTGIKVNGM FLEVCSGNIGGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKALLKNFSFVFLDE NGVEKEYELTSNDYIVNSFKVDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIF EKDNMRIGLAKSI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1333700.fa Sequence name : PCHAS_1333700 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 4.593 CoefTot : -5.948 ChDiff : 9 ZoneTo : 124 KR : 16 DE : 4 CleavSite : 103 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 2.953 0.427 1.014 MesoH : -0.252 0.546 -0.299 0.280 MuHd_075 : 36.457 27.801 13.932 9.390 MuHd_095 : 33.331 21.983 10.247 8.361 MuHd_100 : 32.147 19.183 9.816 6.719 MuHd_105 : 41.295 23.180 11.303 8.698 Hmax_075 : 14.700 15.750 0.429 7.537 Hmax_095 : 13.125 13.475 -4.015 5.478 Hmax_100 : 10.500 26.700 -2.760 5.120 Hmax_105 : 7.400 10.900 -2.714 3.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6063 0.3937 DFMC : 0.6162 0.3838
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 PCHAS_1333700 MNIFFVFPLFLILNFIVLVKSLTENLRVSRYSKPGVSTIILKGGYINRQFIGEISIGNPPQSFKVLFDTGSTNLWIPSKN 80 CYAKACYNKKKYDHNISKNYRISSQKNPVNIFFGTGKVQIAYATDDIHLGSIKVRDQEFGIANYMSDDPFSDMQFDGLFG 160 LGISEDIKRKELIYDNIPKNSSRKNMFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFAVSSKKYWTIKMTGIKVNGM 240 FLEVCSGNIGGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKALLKNFSFVFLDENGVEKEYELTSNDYIVNSFK 320 VDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIFEKDNMRIGLAKSI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1333700 20 NFIVLVK|SL 0.079 . PCHAS_1333700 27 SLTENLR|VS 0.075 . PCHAS_1333700 30 ENLRVSR|YS 0.306 . PCHAS_1333700 33 RVSRYSK|PG 0.100 . PCHAS_1333700 42 VSTIILK|GG 0.059 . PCHAS_1333700 48 KGGYINR|QF 0.099 . PCHAS_1333700 64 NPPQSFK|VL 0.071 . PCHAS_1333700 79 NLWIPSK|NC 0.061 . PCHAS_1333700 84 SKNCYAK|AC 0.077 . PCHAS_1333700 89 AKACYNK|KK 0.067 . PCHAS_1333700 90 KACYNKK|KY 0.102 . PCHAS_1333700 91 ACYNKKK|YD 0.134 . PCHAS_1333700 98 YDHNISK|NY 0.062 . PCHAS_1333700 101 NISKNYR|IS 0.143 . PCHAS_1333700 106 YRISSQK|NP 0.064 . PCHAS_1333700 117 IFFGTGK|VQ 0.059 . PCHAS_1333700 133 IHLGSIK|VR 0.061 . PCHAS_1333700 135 LGSIKVR|DQ 0.185 . PCHAS_1333700 168 GISEDIK|RK 0.065 . PCHAS_1333700 169 ISEDIKR|KE 0.117 . PCHAS_1333700 170 SEDIKRK|EL 0.073 . PCHAS_1333700 179 IYDNIPK|NS 0.066 . PCHAS_1333700 183 IPKNSSR|KN 0.096 . PCHAS_1333700 184 PKNSSRK|NM 0.085 . PCHAS_1333700 193 FSIYYPK|SV 0.145 . PCHAS_1333700 208 TFGGYDK|KY 0.059 . PCHAS_1333700 209 FGGYDKK|YI 0.116 . PCHAS_1333700 225 WFAVSSK|KY 0.076 . PCHAS_1333700 226 FAVSSKK|YW 0.124 . PCHAS_1333700 231 KKYWTIK|MT 0.101 . PCHAS_1333700 236 IKMTGIK|VN 0.066 . PCHAS_1333700 268 SSIAGPK|ND 0.059 . PCHAS_1333700 276 DLILLTK|LL 0.062 . PCHAS_1333700 282 KLLNPVK|SC 0.067 . PCHAS_1333700 287 VKSCQNK|AL 0.080 . PCHAS_1333700 291 QNKALLK|NF 0.065 . PCHAS_1333700 305 DENGVEK|EY 0.062 . PCHAS_1333700 320 YIVNSFK|VD 0.055 . PCHAS_1333700 326 KVDPILK|TP 0.053 . PCHAS_1333700 355 GQVFLQK|YY 0.072 . PCHAS_1333700 362 YYAIFEK|DN 0.078 . PCHAS_1333700 366 FEKDNMR|IG 0.069 . PCHAS_1333700 371 MRIGLAK|SI 0.121 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1333700 ATGAATATATTTTTTGTCTTTCCTTTATTTTTAATTTTAAATTTCATTGTTCTTGTAAAG TCGTTAACAGAGAATTTACGGGTATCTAGATATAGCAAACCAGGAGTTTCAACAATAATA TTGAAAGGAGGTTACATTAATAGACAATTTATTGGGGAAATAAGCATTGGTAATCCTCCT CAATCGTTTAAGGTTTTGTTTGACACTGGTAGTACTAATTTATGGATTCCTTCAAAAAAT TGTTACGCAAAAGCTTGTTATAATAAAAAAAAGTATGACCATAATATATCTAAAAATTAT AGAATATCCTCGCAAAAGAATCCGGTGAATATATTTTTTGGAACGGGCAAAGTTCAAATT GCATATGCTACCGATGATATACACCTAGGAAGTATTAAAGTGAGGGATCAGGAATTTGGA ATAGCAAATTATATGTCCGATGACCCTTTTTCTGATATGCAATTTGATGGACTATTTGGA TTAGGCATTTCAGAGGATATAAAAAGAAAAGAGCTAATATACGACAATATACCAAAGAAT AGTTCTCGAAAAAATATGTTCTCCATTTACTATCCTAAAAGTGTTGATGATAATGGGGCA ATTACATTTGGTGGATATGACAAAAAATATATTGAGCCGAATTCGAATATAGATTGGTTT GCTGTTTCGTCTAAAAAGTATTGGACCATAAAAATGACAGGGATAAAAGTTAATGGCATG TTTTTGGAAGTATGCTCAGGGAATATAGGAGGATATTGCGATGCTGTAATTGATACAGGA ACATCGAGTATTGCAGGACCAAAAAACGACCTAATATTGTTAACTAAATTATTAAATCCT GTAAAATCGTGCCAAAATAAAGCGCTATTAAAAAACTTTTCTTTCGTTTTTTTGGACGAA AACGGTGTAGAGAAAGAATATGAATTAACGTCAAACGATTATATTGTTAATTCGTTTAAA GTTGACCCAATTTTAAAAACCCCATGCAATTTTGCATTTATGCCAATTAATATATCATCA CCTAATGGATATTTATATATTCTTGGCCAAGTATTTTTACAAAAATATTATGCAATATTT GAAAAGGACAATATGAGAATCGGCCTAGCTAAATCGATATAA
  • Download Fasta

  • Fasta :-

    MNIFFVFPLFLILNFIVLVKSLTENLRVSRYSKPGVSTIILKGGYINRQFIGEISIGNPP QSFKVLFDTGSTNLWIPSKNCYAKACYNKKKYDHNISKNYRISSQKNPVNIFFGTGKVQI AYATDDIHLGSIKVRDQEFGIANYMSDDPFSDMQFDGLFGLGISEDIKRKELIYDNIPKN SSRKNMFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFAVSSKKYWTIKMTGIKVNGM FLEVCSGNIGGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKALLKNFSFVFLDE NGVEKEYELTSNDYIVNSFKVDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIF EKDNMRIGLAKSI

  • title: catalytic residue
  • coordinates: D68,D258
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1333700182 SPKNSSRKNM0.993unspPCHAS_1333700182 SPKNSSRKNM0.993unspPCHAS_1333700182 SPKNSSRKNM0.993unspPCHAS_1333700194 SYYPKSVDDN0.991unspPCHAS_133370029 SNLRVSRYSK0.991unspPCHAS_1333700104 SYRISSQKNP0.994unsp

PCHAS_133370      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India