PCHAS_1350800 | signal peptidase complex catalytic subunit SEC11, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1350800OTHER0.9878470.0117780.000375
No Results

  • Fasta :-

    >PCHAS_1350800 MDFIKNQYNSAIADLKKTFRNPRDGISHVLGVICLLLNAFMIWKLLVVATGCESPIVVVL SGSMEPGYYRGDTLALYNPAVIHAGDVVVYQIHGRDIPIVHRILNIHRTHDNQYHLLSKG DNNNIDDRGLYDAHQYWLENQHVLGLSVGYAPYIGMLTIWVNEYPTVKWGIVSVMLLMIL LGYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1350800.fa Sequence name : PCHAS_1350800 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.948 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 2.429 0.321 0.758 MesoH : 0.307 0.996 -0.087 0.432 MuHd_075 : 11.057 5.303 4.135 2.685 MuHd_095 : 35.396 23.170 10.858 7.401 MuHd_100 : 33.206 20.944 9.976 6.778 MuHd_105 : 20.720 13.545 6.313 4.444 Hmax_075 : 3.200 7.700 -0.829 3.330 Hmax_095 : 9.500 12.600 1.059 5.130 Hmax_100 : 14.500 14.500 2.499 5.370 Hmax_105 : -1.662 2.625 -2.265 1.942 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9717 0.0283 DFMC : 0.9744 0.0256
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PCHAS_1350800 MDFIKNQYNSAIADLKKTFRNPRDGISHVLGVICLLLNAFMIWKLLVVATGCESPIVVVLSGSMEPGYYRGDTLALYNPA 80 VIHAGDVVVYQIHGRDIPIVHRILNIHRTHDNQYHLLSKGDNNNIDDRGLYDAHQYWLENQHVLGLSVGYAPYIGMLTIW 160 VNEYPTVKWGIVSVMLLMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1350800 5 --MDFIK|NQ 0.059 . PCHAS_1350800 16 SAIADLK|KT 0.065 . PCHAS_1350800 17 AIADLKK|TF 0.091 . PCHAS_1350800 20 DLKKTFR|NP 0.103 . PCHAS_1350800 23 KTFRNPR|DG 0.252 . PCHAS_1350800 44 NAFMIWK|LL 0.060 . PCHAS_1350800 70 MEPGYYR|GD 0.081 . PCHAS_1350800 95 VYQIHGR|DI 0.118 . PCHAS_1350800 102 DIPIVHR|IL 0.083 . PCHAS_1350800 108 RILNIHR|TH 0.080 . PCHAS_1350800 119 QYHLLSK|GD 0.063 . PCHAS_1350800 128 NNNIDDR|GL 0.111 . PCHAS_1350800 168 NEYPTVK|WG 0.060 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1350800 ATGGATTTCATAAAGAACCAATATAATTCAGCCATAGCAGATCTTAAAAAAACTTTTAGA AATCCAAGAGATGGAATATCCCACGTATTAGGCGTTATATGCTTGTTGCTAAACGCTTTT ATGATATGGAAATTACTAGTAGTAGCAACAGGATGCGAGTCCCCTATTGTTGTCGTATTA AGTGGGAGTATGGAACCCGGATATTACAGAGGCGATACTTTGGCTTTATACAACCCAGCC GTTATACATGCGGGCGATGTTGTAGTATATCAAATACATGGAAGAGATATTCCAATTGTT CATAGAATATTAAATATTCATAGAACACATGATAATCAGTATCATTTATTATCAAAAGGA GATAACAATAATATTGATGATAGAGGATTATATGATGCTCATCAATACTGGTTAGAAAAT CAACATGTACTTGGACTTTCAGTTGGATATGCACCATATATCGGAATGTTAACAATATGG GTTAATGAATATCCAACTGTTAAATGGGGAATAGTTTCAGTAATGTTATTAATGATATTA CTTGGGTATGAATAA
  • Download Fasta

  • Fasta :-

    MDFIKNQYNSAIADLKKTFRNPRDGISHVLGVICLLLNAFMIWKLLVVATGCESPIVVVL SGSMEPGYYRGDTLALYNPAVIHAGDVVVYQIHGRDIPIVHRILNIHRTHDNQYHLLSKG DNNNIDDRGLYDAHQYWLENQHVLGLSVGYAPYIGMLTIWVNEYPTVKWGIVSVMLLMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
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PCHAS_135080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India