PCHAS_1370600 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1370600OTHER0.9999060.0000230.000071
No Results

  • Fasta :-

    >PCHAS_1370600 MMEEIESNDDELRNTKSNLDGNPKIGWFCNKNGLLIRTYGWLVKNAIGIILLIHGFKAHA RLIFMRINLKMPDSNEGLVVDTNNYYIYKDSWIEKFNQNSYSVYALDLQGHGESQSFENI RGNFNCFDDLVDDVMQYMNQIQDEISNDNQMNDEPHNIVTTKKKKLPMYVVGYSMGATIA LRILQLLGEEKEDNINAGDENNYKKCKSILDNSTDVNELGNDMNNYNDYGSDNSCASGNH EGRYNYLDKLNIKGCVSISGMMRMKTPLNTGNKTHKYLYLPIINFLSRVAPHILIPPITG YKKSEYIINVCKHDKFINDNGTKFKCFAELIKAMLTLDSNINYIPKDIPILFVHSKDDSI CHYKGSVSFYNKVNASGNELYPVDGMNHSTLTQPGNEEILKKVIDWISNLRTNDEDE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1370600.fa Sequence name : PCHAS_1370600 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 3.182 CoefTot : 0.000 ChDiff : -11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.018 1.500 0.120 0.670 MesoH : -0.830 0.258 -0.466 0.206 MuHd_075 : 22.078 12.161 4.712 4.128 MuHd_095 : 16.171 14.645 4.535 2.995 MuHd_100 : 25.687 18.139 6.050 4.877 MuHd_105 : 31.701 18.159 6.638 6.010 Hmax_075 : -12.600 -4.287 -6.320 -0.455 Hmax_095 : -11.300 -0.525 -5.513 0.070 Hmax_100 : -10.100 1.200 -5.225 0.830 Hmax_105 : -0.100 4.400 -2.508 2.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9190 0.0810 DFMC : 0.9630 0.0370
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 PCHAS_1370600 MMEEIESNDDELRNTKSNLDGNPKIGWFCNKNGLLIRTYGWLVKNAIGIILLIHGFKAHARLIFMRINLKMPDSNEGLVV 80 DTNNYYIYKDSWIEKFNQNSYSVYALDLQGHGESQSFENIRGNFNCFDDLVDDVMQYMNQIQDEISNDNQMNDEPHNIVT 160 TKKKKLPMYVVGYSMGATIALRILQLLGEEKEDNINAGDENNYKKCKSILDNSTDVNELGNDMNNYNDYGSDNSCASGNH 240 EGRYNYLDKLNIKGCVSISGMMRMKTPLNTGNKTHKYLYLPIINFLSRVAPHILIPPITGYKKSEYIINVCKHDKFINDN 320 GTKFKCFAELIKAMLTLDSNINYIPKDIPILFVHSKDDSICHYKGSVSFYNKVNASGNELYPVDGMNHSTLTQPGNEEIL 400 KKVIDWISNLRTNDEDE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1370600 13 SNDDELR|NT 0.085 . PCHAS_1370600 16 DELRNTK|SN 0.146 . PCHAS_1370600 24 NLDGNPK|IG 0.057 . PCHAS_1370600 31 IGWFCNK|NG 0.060 . PCHAS_1370600 37 KNGLLIR|TY 0.098 . PCHAS_1370600 44 TYGWLVK|NA 0.070 . PCHAS_1370600 57 LLIHGFK|AH 0.062 . PCHAS_1370600 61 GFKAHAR|LI 0.105 . PCHAS_1370600 66 ARLIFMR|IN 0.106 . PCHAS_1370600 70 FMRINLK|MP 0.061 . PCHAS_1370600 89 NNYYIYK|DS 0.074 . PCHAS_1370600 95 KDSWIEK|FN 0.076 . PCHAS_1370600 121 QSFENIR|GN 0.112 . PCHAS_1370600 162 HNIVTTK|KK 0.061 . PCHAS_1370600 163 NIVTTKK|KK 0.085 . PCHAS_1370600 164 IVTTKKK|KL 0.102 . PCHAS_1370600 165 VTTKKKK|LP 0.087 . PCHAS_1370600 182 GATIALR|IL 0.070 . PCHAS_1370600 191 QLLGEEK|ED 0.056 . PCHAS_1370600 204 GDENNYK|KC 0.064 . PCHAS_1370600 205 DENNYKK|CK 0.116 . PCHAS_1370600 207 NNYKKCK|SI 0.098 . PCHAS_1370600 243 SGNHEGR|YN 0.093 . PCHAS_1370600 249 RYNYLDK|LN 0.071 . PCHAS_1370600 253 LDKLNIK|GC 0.062 . PCHAS_1370600 263 SISGMMR|MK 0.109 . PCHAS_1370600 265 SGMMRMK|TP 0.059 . PCHAS_1370600 273 PLNTGNK|TH 0.052 . PCHAS_1370600 276 TGNKTHK|YL 0.074 . PCHAS_1370600 288 IINFLSR|VA 0.097 . PCHAS_1370600 302 PPITGYK|KS 0.061 . PCHAS_1370600 303 PITGYKK|SE 0.106 . PCHAS_1370600 312 YIINVCK|HD 0.062 . PCHAS_1370600 315 NVCKHDK|FI 0.083 . PCHAS_1370600 323 INDNGTK|FK 0.065 . PCHAS_1370600 325 DNGTKFK|CF 0.074 . PCHAS_1370600 332 CFAELIK|AM 0.057 . PCHAS_1370600 346 NINYIPK|DI 0.080 . PCHAS_1370600 356 ILFVHSK|DD 0.078 . PCHAS_1370600 364 DSICHYK|GS 0.063 . PCHAS_1370600 372 SVSFYNK|VN 0.064 . PCHAS_1370600 401 GNEEILK|KV 0.077 . PCHAS_1370600 402 NEEILKK|VI 0.107 . PCHAS_1370600 411 DWISNLR|TN 0.075 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1370600 ATGATGGAAGAAATTGAATCGAACGATGACGAATTAAGAAATACAAAATCCAATTTAGAT GGCAACCCTAAGATAGGTTGGTTCTGTAATAAAAATGGTTTACTTATAAGAACATATGGG TGGCTAGTTAAAAATGCTATAGGAATTATATTGTTAATACATGGATTCAAAGCTCATGCT CGATTAATTTTTATGAGAATAAATTTAAAAATGCCAGATAGCAATGAAGGCTTAGTAGTA GACACTAATAATTACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAATAGT TATTCAGTATATGCATTAGATTTACAAGGGCATGGCGAATCACAATCATTTGAAAATATA AGAGGCAATTTTAATTGTTTTGATGATCTGGTCGATGATGTAATGCAATATATGAATCAG ATTCAAGATGAAATTTCAAATGATAATCAAATGAATGATGAACCTCATAATATAGTAACC ACTAAAAAAAAAAAACTTCCTATGTATGTTGTTGGATATTCAATGGGAGCAACGATTGCT TTAAGGATATTACAATTATTAGGGGAAGAAAAAGAAGATAACATCAATGCTGGAGATGAA AATAACTATAAAAAATGTAAATCCATATTAGACAACTCTACTGATGTTAATGAACTTGGC AATGATATGAATAATTATAATGATTATGGTTCCGATAATTCCTGTGCTAGTGGTAATCAT GAAGGACGCTATAATTATTTAGATAAATTAAATATTAAAGGTTGCGTATCTATATCTGGT ATGATGAGAATGAAAACGCCATTGAATACTGGAAACAAAACACATAAGTATTTATATTTA CCTATAATAAACTTCCTGTCTCGCGTTGCACCTCATATACTTATTCCGCCAATAACAGGT TATAAAAAGTCCGAATATATTATTAATGTATGTAAACATGATAAATTTATAAATGATAAT GGAACAAAATTTAAATGTTTCGCTGAGCTTATAAAAGCAATGCTTACATTGGATAGTAAT ATTAATTATATACCAAAAGATATTCCTATATTATTTGTGCATTCAAAAGATGATAGTATT TGTCATTATAAAGGGTCAGTTTCGTTTTATAATAAAGTAAATGCTAGTGGAAACGAATTA TATCCTGTTGATGGTATGAATCATTCTACATTGACACAACCAGGAAATGAAGAAATTTTA AAAAAAGTTATTGATTGGATTAGTAATTTAAGAACGAATGATGAAGATGAATAA
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  • Fasta :-

    MMEEIESNDDELRNTKSNLDGNPKIGWFCNKNGLLIRTYGWLVKNAIGIILLIHGFKAHA RLIFMRINLKMPDSNEGLVVDTNNYYIYKDSWIEKFNQNSYSVYALDLQGHGESQSFENI RGNFNCFDDLVDDVMQYMNQIQDEISNDNQMNDEPHNIVTTKKKKLPMYVVGYSMGATIA LRILQLLGEEKEDNINAGDENNYKKCKSILDNSTDVNELGNDMNNYNDYGSDNSCASGNH EGRYNYLDKLNIKGCVSISGMMRMKTPLNTGNKTHKYLYLPIINFLSRVAPHILIPPITG YKKSEYIINVCKHDKFINDNGTKFKCFAELIKAMLTLDSNINYIPKDIPILFVHSKDDSI CHYKGSVSFYNKVNASGNELYPVDGMNHSTLTQPGNEEILKKVIDWISNLRTNDEDE

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PCHAS_1370600355 SLFVHSKDDS0.993unsp

PCHAS_137060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India