PCHAS_1402100 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1402100OTHER0.9996450.0000730.000282
No Results

  • Fasta :-

    >PCHAS_1402100 MKFNDDELRNTKSNLDGNPKIGWLCNKKGLLLKTYRWLAKNATGVILLIHGLKAHIRLTF MRINLKMPNGNEGLIVDTNNYYIYKDSWIEKFNQSGYSVYALDLQGHGESQGWKNVRGDF SSFYDLIDDVLQYMNQIQDEISNDNQTDGESYDIVSTKKKKLPMYVIGYSTGGNIALRIL QLLNKEKEDRIKAWNSNNYKNSNIILDNSTDVNDIDNGMSNYKNGDPGTSSASTSATTNA IISANDKHKGCYNSLDKFNIKGCITISGMIRIKSKRDPGNKSLKYFYLPIIKLLSLILPY KRFLPLSSYKGSAYIANVSKHDKFRNNNGITFKSMYELIKATITLDYNINYMPKDVPLLF VHSKDDRVCSYEWTALFHNKVKVDKKDLYTLDDMGHAITMKPGNEEVLKKIIDWIYDLRN GEDEIEDEI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1402100.fa Sequence name : PCHAS_1402100 Sequence length : 429 VALUES OF COMPUTED PARAMETERS Coef20 : 3.018 CoefTot : -0.247 ChDiff : 6 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.976 1.500 0.015 0.564 MesoH : -0.900 0.110 -0.474 0.149 MuHd_075 : 8.109 2.204 1.666 1.274 MuHd_095 : 25.335 14.855 5.738 5.203 MuHd_100 : 28.881 12.780 5.360 5.261 MuHd_105 : 29.718 9.368 5.188 4.975 Hmax_075 : -10.300 -5.500 -5.634 -0.420 Hmax_095 : -7.300 -0.800 -4.828 1.050 Hmax_100 : -7.600 -1.700 -5.119 0.490 Hmax_105 : -10.850 -4.550 -6.219 -0.254 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9791 0.0209 DFMC : 0.9782 0.0218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 429 PCHAS_1402100 MKFNDDELRNTKSNLDGNPKIGWLCNKKGLLLKTYRWLAKNATGVILLIHGLKAHIRLTFMRINLKMPNGNEGLIVDTNN 80 YYIYKDSWIEKFNQSGYSVYALDLQGHGESQGWKNVRGDFSSFYDLIDDVLQYMNQIQDEISNDNQTDGESYDIVSTKKK 160 KLPMYVIGYSTGGNIALRILQLLNKEKEDRIKAWNSNNYKNSNIILDNSTDVNDIDNGMSNYKNGDPGTSSASTSATTNA 240 IISANDKHKGCYNSLDKFNIKGCITISGMIRIKSKRDPGNKSLKYFYLPIIKLLSLILPYKRFLPLSSYKGSAYIANVSK 320 HDKFRNNNGITFKSMYELIKATITLDYNINYMPKDVPLLFVHSKDDRVCSYEWTALFHNKVKVDKKDLYTLDDMGHAITM 400 KPGNEEVLKKIIDWIYDLRNGEDEIEDEI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1402100 2 -----MK|FN 0.090 . PCHAS_1402100 9 FNDDELR|NT 0.083 . PCHAS_1402100 12 DELRNTK|SN 0.146 . PCHAS_1402100 20 NLDGNPK|IG 0.056 . PCHAS_1402100 27 IGWLCNK|KG 0.052 . PCHAS_1402100 28 GWLCNKK|GL 0.076 . PCHAS_1402100 33 KKGLLLK|TY 0.059 . PCHAS_1402100 36 LLLKTYR|WL 0.091 . PCHAS_1402100 40 TYRWLAK|NA 0.085 . PCHAS_1402100 53 LLIHGLK|AH 0.059 . PCHAS_1402100 57 GLKAHIR|LT 0.098 . PCHAS_1402100 62 IRLTFMR|IN 0.105 . PCHAS_1402100 66 FMRINLK|MP 0.061 . PCHAS_1402100 85 NNYYIYK|DS 0.074 . PCHAS_1402100 91 KDSWIEK|FN 0.079 . PCHAS_1402100 114 GESQGWK|NV 0.089 . PCHAS_1402100 117 QGWKNVR|GD 0.102 . PCHAS_1402100 158 YDIVSTK|KK 0.059 . PCHAS_1402100 159 DIVSTKK|KK 0.075 . PCHAS_1402100 160 IVSTKKK|KL 0.119 . PCHAS_1402100 161 VSTKKKK|LP 0.096 . PCHAS_1402100 178 GGNIALR|IL 0.078 . PCHAS_1402100 185 ILQLLNK|EK 0.064 . PCHAS_1402100 187 QLLNKEK|ED 0.061 . PCHAS_1402100 190 NKEKEDR|IK 0.078 . PCHAS_1402100 192 EKEDRIK|AW 0.063 . PCHAS_1402100 200 WNSNNYK|NS 0.078 . PCHAS_1402100 223 NGMSNYK|NG 0.066 . PCHAS_1402100 247 IISANDK|HK 0.069 . PCHAS_1402100 249 SANDKHK|GC 0.091 . PCHAS_1402100 257 CYNSLDK|FN 0.068 . PCHAS_1402100 261 LDKFNIK|GC 0.072 . PCHAS_1402100 271 TISGMIR|IK 0.115 . PCHAS_1402100 273 SGMIRIK|SK 0.081 . PCHAS_1402100 275 MIRIKSK|RD 0.061 . PCHAS_1402100 276 IRIKSKR|DP 0.362 . PCHAS_1402100 281 KRDPGNK|SL 0.068 . PCHAS_1402100 284 PGNKSLK|YF 0.062 . PCHAS_1402100 292 FYLPIIK|LL 0.059 . PCHAS_1402100 301 SLILPYK|RF 0.056 . PCHAS_1402100 302 LILPYKR|FL 0.102 . PCHAS_1402100 310 LPLSSYK|GS 0.067 . PCHAS_1402100 320 YIANVSK|HD 0.060 . PCHAS_1402100 323 NVSKHDK|FR 0.080 . PCHAS_1402100 325 SKHDKFR|NN 0.136 . PCHAS_1402100 333 NNGITFK|SM 0.084 . PCHAS_1402100 340 SMYELIK|AT 0.067 . PCHAS_1402100 354 NINYMPK|DV 0.088 . PCHAS_1402100 364 LLFVHSK|DD 0.070 . PCHAS_1402100 367 VHSKDDR|VC 0.092 . PCHAS_1402100 380 TALFHNK|VK 0.066 . PCHAS_1402100 382 LFHNKVK|VD 0.067 . PCHAS_1402100 385 NKVKVDK|KD 0.064 . PCHAS_1402100 386 KVKVDKK|DL 0.144 . PCHAS_1402100 401 GHAITMK|PG 0.064 . PCHAS_1402100 409 GNEEVLK|KI 0.072 . PCHAS_1402100 410 NEEVLKK|II 0.132 . PCHAS_1402100 419 DWIYDLR|NG 0.085 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1402100 ATGAAATTTAATGATGATGAATTAAGAAATACAAAATCCAATTTAGATGGCAATCCTAAG ATAGGTTGGTTATGTAATAAAAAGGGTTTACTTTTAAAAACATATAGATGGCTAGCTAAA AATGCTACAGGAGTTATATTGTTAATACATGGATTAAAAGCTCACATTCGATTAACTTTT ATGAGAATAAATTTAAAAATGCCAAATGGTAATGAAGGCTTAATAGTAGATACTAATAAT TACTATATTTATAAAGATAGTTGGATTGAAAAATTTAATCAAAGTGGTTATTCAGTATAT GCACTAGATTTACAAGGACATGGTGAATCACAAGGATGGAAAAATGTAAGAGGCGATTTT AGTTCTTTTTATGATCTAATTGATGATGTACTACAATATATGAATCAAATTCAAGATGAA ATATCAAATGATAATCAAACGGATGGTGAATCTTATGATATTGTATCAACTAAAAAAAAA AAACTTCCTATGTATGTTATTGGATATTCGACAGGAGGAAATATTGCTTTAAGAATATTA CAATTATTAAATAAAGAAAAAGAAGACAGAATTAAGGCGTGGAATTCAAATAACTATAAA AATAGTAACATCATTTTAGACAACTCTACTGATGTTAATGATATTGACAATGGTATGAGT AATTACAAAAATGGTGATCCAGGTACTTCTAGTGCTAGTACCTCTGCTACGACAAATGCC ATTATTAGCGCCAACGATAAACATAAAGGATGCTATAATTCTTTAGATAAATTCAATATT AAAGGATGCATAACTATATCTGGTATGATAAGAATAAAATCAAAACGGGATCCTGGAAAC AAATCACTTAAGTATTTTTATTTACCTATAATAAAATTACTGTCTCTCATCTTACCTTAT AAGCGATTTTTGCCATTATCAAGTTATAAAGGATCCGCATACATTGCTAATGTAAGTAAA CATGATAAATTTAGAAATAATAATGGAATAACATTTAAATCCATGTATGAGCTTATAAAA GCAACAATCACATTGGATTATAATATTAATTATATGCCAAAAGATGTTCCTTTATTATTT GTGCATTCAAAAGATGATAGAGTTTGTTCTTATGAATGGACAGCTTTGTTTCATAATAAA GTGAAAGTTGATAAAAAAGATTTATATACTCTTGATGATATGGGCCATGCTATAACGATG AAGCCCGGAAATGAAGAAGTTTTAAAAAAAATTATTGATTGGATTTATGATTTAAGGAAT GGTGAAGATGAAATAGAAGATGAAATATAA
  • Download Fasta

  • Fasta :-

    MKFNDDELRNTKSNLDGNPKIGWLCNKKGLLLKTYRWLAKNATGVILLIHGLKAHIRLTF MRINLKMPNGNEGLIVDTNNYYIYKDSWIEKFNQSGYSVYALDLQGHGESQGWKNVRGDF SSFYDLIDDVLQYMNQIQDEISNDNQTDGESYDIVSTKKKKLPMYVIGYSTGGNIALRIL QLLNKEKEDRIKAWNSNNYKNSNIILDNSTDVNDIDNGMSNYKNGDPGTSSASTSATTNA IISANDKHKGCYNSLDKFNIKGCITISGMIRIKSKRDPGNKSLKYFYLPIIKLLSLILPY KRFLPLSSYKGSAYIANVSKHDKFRNNNGITFKSMYELIKATITLDYNINYMPKDVPLLF VHSKDDRVCSYEWTALFHNKVKVDKKDLYTLDDMGHAITMKPGNEEVLKKIIDWIYDLRN GEDEIEDEI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1402100274 SIRIKSKRDP0.997unspPCHAS_1402100370 SDRVCSYEWT0.994unsp

PCHAS_140210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India