PCHAS_1411900 | 26S protease regulatory subunit 7, putative

_IDPredictionOTHERSPmTPCS_Position
PCHAS_1411900OTHER0.9999240.0000320.000044
No Results

  • Fasta :-

    >PCHAS_1411900 MEEEPTTQSKPLDDEDINILKSYGSGPYSKSIKKVETDITGLLTNINKLCGVRESDTGLC LPNQWDLQLDKQMLNEEQPLQVARCTKIINSDTDQTKYIINVKQIAKFVVGLGDKVAPSD IEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG ARLVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG NIKVIMATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELL ARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1411900.fa Sequence name : PCHAS_1411900 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 2.673 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.247 0.094 0.454 MesoH : -0.789 0.355 -0.344 0.176 MuHd_075 : 18.353 11.346 4.650 3.614 MuHd_095 : 18.122 12.117 5.289 3.448 MuHd_100 : 14.246 7.656 3.741 2.354 MuHd_105 : 10.238 2.024 1.682 1.307 Hmax_075 : -5.163 0.175 -3.178 1.330 Hmax_095 : -11.200 -2.363 -4.603 0.472 Hmax_100 : -14.700 -7.200 -6.370 -0.350 Hmax_105 : -13.900 -6.400 -5.571 -0.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9928 0.0072 DFMC : 0.9944 0.0056
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 PCHAS_1411900 MEEEPTTQSKPLDDEDINILKSYGSGPYSKSIKKVETDITGLLTNINKLCGVRESDTGLCLPNQWDLQLDKQMLNEEQPL 80 QVARCTKIINSDTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDIT 160 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG 240 ARLVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVIMATNRPDTLDSALVR 320 PGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400 NKVIHGCKQFSATGKYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1411900 10 EPTTQSK|PL 0.074 . PCHAS_1411900 21 EDINILK|SY 0.085 . PCHAS_1411900 30 GSGPYSK|SI 0.142 . PCHAS_1411900 33 PYSKSIK|KV 0.106 . PCHAS_1411900 34 YSKSIKK|VE 0.085 . PCHAS_1411900 48 LLTNINK|LC 0.064 . PCHAS_1411900 53 NKLCGVR|ES 0.088 . PCHAS_1411900 71 WDLQLDK|QM 0.057 . PCHAS_1411900 84 QPLQVAR|CT 0.118 . PCHAS_1411900 87 QVARCTK|II 0.136 . PCHAS_1411900 97 SDTDQTK|YI 0.075 . PCHAS_1411900 103 KYIINVK|QI 0.064 . PCHAS_1411900 107 NVKQIAK|FV 0.078 . PCHAS_1411900 115 VVGLGDK|VA 0.054 . PCHAS_1411900 126 DIEEGMR|VG 0.065 . PCHAS_1411900 131 MRVGVDR|TK 0.130 . PCHAS_1411900 133 VGVDRTK|YK 0.069 . PCHAS_1411900 135 VDRTKYK|IQ 0.064 . PCHAS_1411900 143 QILLPPK|ID 0.059 . PCHAS_1411900 156 MMTVEEK|PD 0.062 . PCHAS_1411900 168 NDIGGCK|EQ 0.057 . PCHAS_1411900 173 CKEQLEK|LR 0.063 . PCHAS_1411900 175 EQLEKLR|EV 0.093 . PCHAS_1411900 187 PLLQPER|FV 0.119 . PCHAS_1411900 197 LGIDPPK|GV 0.077 . PCHAS_1411900 209 GPPGTGK|TL 0.062 . PCHAS_1411900 214 GKTLTAR|AI 0.092 . PCHAS_1411900 219 ARAIANR|TD 0.083 . PCHAS_1411900 235 GSELVQK|YV 0.128 . PCHAS_1411900 242 YVGEGAR|LV 0.115 . PCHAS_1411900 245 EGARLVR|EL 0.253 . PCHAS_1411900 252 ELFQMAK|SK 0.077 . PCHAS_1411900 254 FQMAKSK|KA 0.080 . PCHAS_1411900 255 QMAKSKK|AC 0.109 . PCHAS_1411900 271 DAIGGSR|GD 0.087 . PCHAS_1411900 284 GDHEVQR|TM 0.110 . PCHAS_1411900 299 LDGFDNR|GN 0.119 . PCHAS_1411900 303 DNRGNIK|VI 0.062 . PCHAS_1411900 310 VIMATNR|PD 0.070 . PCHAS_1411900 320 LDSALVR|PG 0.091 . PCHAS_1411900 323 ALVRPGR|ID 0.312 . PCHAS_1411900 326 RPGRIDR|KI 0.417 . PCHAS_1411900 327 PGRIDRK|IE 0.072 . PCHAS_1411900 338 LPDLEGR|TH 0.083 . PCHAS_1411900 343 GRTHIFK|IH 0.064 . PCHAS_1411900 353 NTMNMSR|DV 0.146 . PCHAS_1411900 356 NMSRDVR|FE 0.206 . PCHAS_1411900 362 RFELLAR|LC 0.069 . PCHAS_1411900 373 STGSDIR|SV 0.274 . PCHAS_1411900 385 AGMFAIR|AR 0.085 . PCHAS_1411900 387 MFAIRAR|RK 0.112 . PCHAS_1411900 388 FAIRARR|KT 0.379 . PCHAS_1411900 389 AIRARRK|TI 0.091 . PCHAS_1411900 394 RKTITEK|DL 0.070 . PCHAS_1411900 402 LLLAINK|VI 0.058 . PCHAS_1411900 408 KVIHGCK|QF 0.075 . PCHAS_1411900 415 QFSATGK|YM 0.072 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1411900 ATGGAAGAAGAACCAACTACTCAGTCCAAACCATTAGATGATGAGGATATAAACATTTTG AAATCATATGGTTCAGGACCATATTCAAAAAGTATAAAAAAAGTAGAAACTGACATTACT GGATTACTTACTAACATTAATAAGCTATGTGGGGTAAGGGAAAGCGATACAGGATTATGT TTGCCAAATCAATGGGATTTGCAATTAGATAAACAAATGTTAAATGAAGAACAACCATTA CAAGTAGCTAGGTGCACAAAGATAATAAATTCTGATACAGATCAAACAAAATATATAATA AATGTAAAACAAATAGCAAAATTTGTTGTCGGTTTAGGCGATAAAGTGGCACCTAGTGAT ATTGAAGAAGGTATGAGAGTTGGAGTTGATAGAACAAAGTATAAAATTCAAATTTTATTA CCTCCAAAAATAGATCCTAGTGTTACTATGATGACTGTTGAAGAAAAACCAGATATAACA TATAATGATATTGGTGGATGTAAAGAACAATTAGAAAAATTAAGAGAAGTTGTTGAAATG CCTTTATTACAACCTGAGAGATTTGTAACATTAGGTATTGACCCACCCAAGGGTGTTTTA CTTTACGGGCCTCCAGGTACAGGAAAAACATTAACAGCTCGAGCTATTGCAAATAGAACA GATGCATGTTTTATTTGTGTTATAGGTTCAGAATTAGTTCAAAAATATGTAGGTGAGGGA GCAAGACTGGTTAGAGAATTATTTCAAATGGCTAAATCTAAAAAAGCATGTATTTTATTT ATTGATGAAGTAGATGCTATTGGAGGGTCAAGAGGAGATGAAAGTGCTCATGGAGATCAT GAAGTTCAAAGAACTATGCTTGAAATAGTAAATCAATTAGATGGTTTTGATAATAGAGGT AATATAAAAGTTATAATGGCAACTAATAGGCCAGATACATTAGATAGTGCTTTAGTTCGA CCAGGTAGAATTGACAGAAAAATTGAATTTAGTTTACCCGATCTTGAAGGAAGAACACAT ATTTTTAAAATACATGCTAATACTATGAACATGAGTAGAGATGTAAGATTTGAACTTTTA GCAAGATTATGCCCTAATAGCACAGGTTCAGATATTAGAAGTGTATGCACAGAGGCAGGA ATGTTTGCCATCAGAGCAAGGAGAAAAACAATTACTGAAAAAGATTTATTACTTGCAATC AATAAAGTTATACACGGTTGCAAACAATTTTCGGCAACTGGAAAATATATGGTGTATAAT TAA
  • Download Fasta

  • Fasta :-

    MEEEPTTQSKPLDDEDINILKSYGSGPYSKSIKKVETDITGLLTNINKLCGVRESDTGLC LPNQWDLQLDKQMLNEEQPLQVARCTKIINSDTDQTKYIINVKQIAKFVVGLGDKVAPSD IEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG ARLVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG NIKVIMATNRPDTLDSALVRPGRIDRKIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELL ARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVIHGCKQFSATGKYMVYN

  • title: ATP binding site
  • coordinates: P204,P205,G206,T207,G208,K209,T210,L211,D262,N309
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_141190091 SKIINSDTDQ0.992unspPCHAS_1411900119 SKVAPSDIEE0.993unsp

PCHAS_141190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India