PCHAS_1435500 | PPPDE peptidase domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PCHAS_1435500OTHER0.9975040.0016840.000812
No Results

  • Fasta :-

    >PCHAS_1435500 MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPYEF ESLYNIKPVEIIDMGETEVDKTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLG KGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMENSTPNNSEVKNDSNSNNNDSQ KNNVTEYSKVPSVSIDNFFTGNKINSIFEDYLKSDKHNSSEKKTFINLLNSFFNKLINNP NILQNRIIYKKNNELFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQIFTLYIDSTYSK NCPTSKNIDLFINKKIYLKSLDSSIYKVDLLSFKNISEYALDSNTKKANANEIYIFLSEY FISNHFDITNSKNDNNNFNTIKSAISSDLETEKHYLVNIYELVTKHLNLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PCHAS_1435500.fa Sequence name : PCHAS_1435500 Sequence length : 410 VALUES OF COMPUTED PARAMETERS Coef20 : 4.068 CoefTot : -3.541 ChDiff : -6 ZoneTo : 58 KR : 5 DE : 2 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.276 0.077 0.575 MesoH : -0.393 0.303 -0.366 0.309 MuHd_075 : 32.016 14.925 8.297 7.125 MuHd_095 : 37.803 23.649 8.431 7.709 MuHd_100 : 39.704 22.731 9.490 8.172 MuHd_105 : 42.107 23.867 10.178 8.477 Hmax_075 : 16.300 14.900 2.633 6.770 Hmax_095 : 19.600 20.700 2.526 7.250 Hmax_100 : 17.400 16.500 2.872 5.970 Hmax_105 : 18.083 18.200 3.333 6.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5602 0.4398 DFMC : 0.8272 0.1728
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 410 PCHAS_1435500 MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPYEFESLYNIKPVEIIDMGETEVD 80 KTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLGKGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMEN 160 STPNNSEVKNDSNSNNNDSQKNNVTEYSKVPSVSIDNFFTGNKINSIFEDYLKSDKHNSSEKKTFINLLNSFFNKLINNP 240 NILQNRIIYKKNNELFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQIFTLYIDSTYSKNCPTSKNIDLFINKKIYLKS 320 LDSSIYKVDLLSFKNISEYALDSNTKKANANEIYIFLSEYFISNHFDITNSKNDNNNFNTIKSAISSDLETEKHYLVNIY 400 ELVTKHLNLL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PCHAS_1435500 8 ATTYNVK|LK 0.055 . PCHAS_1435500 10 TYNVKLK|IY 0.093 . PCHAS_1435500 16 KIYDLSR|GM 0.074 . PCHAS_1435500 20 LSRGMVK|LW 0.072 . PCHAS_1435500 29 SPLLIGK|QI 0.085 . PCHAS_1435500 67 ESLYNIK|PV 0.092 . PCHAS_1435500 81 GETEVDK|TF 0.058 . PCHAS_1435500 92 DYLDGIR|PN 0.066 . PCHAS_1435500 99 PNFTTDK|YN 0.061 . PCHAS_1435500 121 CNFLLGK|GI 0.072 . PCHAS_1435500 139 EVMSTPK|GK 0.064 . PCHAS_1435500 141 MSTPKGK|LI 0.081 . PCHAS_1435500 169 PNNSEVK|ND 0.066 . PCHAS_1435500 181 NNNDSQK|NN 0.069 . PCHAS_1435500 189 NVTEYSK|VP 0.059 . PCHAS_1435500 203 NFFTGNK|IN 0.061 . PCHAS_1435500 213 IFEDYLK|SD 0.060 . PCHAS_1435500 216 DYLKSDK|HN 0.063 . PCHAS_1435500 222 KHNSSEK|KT 0.074 . PCHAS_1435500 223 HNSSEKK|TF 0.142 . PCHAS_1435500 235 LNSFFNK|LI 0.070 . PCHAS_1435500 246 PNILQNR|II 0.103 . PCHAS_1435500 250 QNRIIYK|KN 0.069 . PCHAS_1435500 251 NRIIYKK|NN 0.093 . PCHAS_1435500 267 NDSEYNK|IL 0.085 . PCHAS_1435500 276 SYIGFVK|GY 0.064 . PCHAS_1435500 300 IDSTYSK|NC 0.062 . PCHAS_1435500 306 KNCPTSK|NI 0.066 . PCHAS_1435500 314 IDLFINK|KI 0.056 . PCHAS_1435500 315 DLFINKK|IY 0.092 . PCHAS_1435500 319 NKKIYLK|SL 0.079 . PCHAS_1435500 327 LDSSIYK|VD 0.058 . PCHAS_1435500 334 VDLLSFK|NI 0.062 . PCHAS_1435500 346 ALDSNTK|KA 0.068 . PCHAS_1435500 347 LDSNTKK|AN 0.129 . PCHAS_1435500 372 FDITNSK|ND 0.059 . PCHAS_1435500 382 NNFNTIK|SA 0.085 . PCHAS_1435500 393 SDLETEK|HY 0.059 . PCHAS_1435500 405 IYELVTK|HL 0.062 . ____________________________^_________________

  • Fasta :-

    >PCHAS_1435500 ATGGCAACGACATATAATGTTAAGCTAAAGATATACGACTTATCCCGAGGAATGGTAAAA TTGTGGTCTCCGCTGTTAATTGGGAAACAAATTGGTGGAGTTTGGCATACAGCCGTTTTG ATATATAACATGGAATATTTTTACGGAGGAGGAATAATGTGTTTGCCTCCATACGAATTC GAATCACTTTATAACATAAAACCAGTAGAAATTATAGATATGGGAGAAACTGAAGTAGAT AAAACATTTTTTCATGATTACCTTGATGGAATTCGACCAAACTTTACTACAGATAAATAT AATTTAATTAATTGGAATTGTAATAATTTTACTAATGAAGCTTGTAATTTTCTTCTTGGA AAAGGTATTCCCCAATATATTTTGAATACACCATATGAAGTTATGTCAACACCTAAAGGA AAGTTAATATTAGACATGATGCAGTCATGCCAAACCTCTATTGCACCAGGTATGGAAAAC AGTACCCCAAATAATAGTGAAGTAAAAAATGATAGCAATAGTAATAATAATGATAGCCAA AAAAATAATGTAACTGAATATTCTAAAGTCCCCAGTGTATCTATAGATAATTTTTTTACG GGAAATAAAATAAACAGTATATTTGAAGATTATTTAAAAAGTGATAAGCATAATTCCAGT GAAAAAAAAACCTTTATTAATTTATTAAACTCATTTTTTAACAAATTAATTAATAATCCA AACATATTACAAAATAGAATAATATATAAAAAAAATAATGAACTATTTAATAATGTTTCA AATGATTCAGAATATAATAAAATACTATCATATATTGGATTTGTTAAAGGATATGTTGAA ATTGATGAAATAAATAATTTACAAATTTTTACACTTTATATAGATTCAACATATAGTAAA AATTGCCCTACTTCAAAAAATATTGATTTATTTATAAATAAAAAAATATATTTAAAAAGT TTAGATTCATCTATTTATAAAGTAGACCTTTTATCTTTTAAAAATATTTCTGAATATGCT CTTGATAGTAATACAAAAAAAGCAAATGCCAATGAAATTTATATTTTTTTATCAGAGTAT TTTATAAGCAACCATTTTGATATTACAAATAGCAAAAATGATAATAACAATTTTAACACT ATAAAAAGTGCAATTAGTTCCGATTTGGAAACAGAAAAACATTATTTGGTCAATATATAT GAACTAGTAACCAAACACCTAAATTTATTATAG
  • Download Fasta

  • Fasta :-

    MATTYNVKLKIYDLSRGMVKLWSPLLIGKQIGGVWHTAVLIYNMEYFYGGGIMCLPPYEF ESLYNIKPVEIIDMGETEVDKTFFHDYLDGIRPNFTTDKYNLINWNCNNFTNEACNFLLG KGIPQYILNTPYEVMSTPKGKLILDMMQSCQTSIAPGMENSTPNNSEVKNDSNSNNNDSQ KNNVTEYSKVPSVSIDNFFTGNKINSIFEDYLKSDKHNSSEKKTFINLLNSFFNKLINNP NILQNRIIYKKNNELFNNVSNDSEYNKILSYIGFVKGYVEIDEINNLQIFTLYIDSTYSK NCPTSKNIDLFINKKIYLKSLDSSIYKVDLLSFKNISEYALDSNTKKANANEIYIFLSEY FISNHFDITNSKNDNNNFNTIKSAISSDLETEKHYLVNIYELVTKHLNLL

    No Results
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No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PCHAS_1435500179 SNNNDSQKNN0.995unspPCHAS_1435500220 SKHNSSEKKT0.996unsp

PCHAS_143550      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India