PF3D7_0311700 | plasmepsin VI

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0044310      

  • Curated_GO_Components:  osmiophilic body      

  • Curated_GO_Function_IDs:  GO:0004190      

  • Curated_GO_Functions:  aspartic-type endopeptidase activity      

  • Curated_GO_Processes:  proteolysis      

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0311700SP0.0132820.9866920.000026CS pos: 24-25. IHT-LN. Pr: 0.8758
No Results

  • Fasta :-

    >PF3D7_0311700 MPYFHIFLYILIFCVLVHICPIHTLNIFKNDENEKGSLNIPLGKENNLFFNEIKLENRFK NNIKGYIQNVQKFHYLMEKNKPNVLSYIQEDLLNFHNSQFIADIGVGNPPQVFKVVFDTG SSNLAIPSTKCIKGGCASHKKFNPNKSRTFTKNLKNNQESVYTYIQYGTGTSILEQSYDD VYLKGLKIKHQCIGLAIEESLHPFSDLPFDGIVGLGFSDPDFRSQNKYASPLIETIKKQN LLKRNIFSFYVPKKLEKSGAITFGKANKKYTVEGKSIEWFPVISLYYWEINLLDIQLSHK NLFLCESKKCRAAIDTGSSLITGPSTFIQPLLEKINLERDCSNKESLPIISFVLKNVEGK EITLDFMPEDYIIEEGDTENNTLECVIGIMPLDVPPPRGPIFIFGNSFIRKYYTIFDNDH KLIGLIEANHNF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0311700.fa Sequence name : PF3D7_0311700 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 4.182 CoefTot : -1.430 ChDiff : 1 ZoneTo : 30 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.153 2.753 0.565 0.909 MesoH : -0.749 0.204 -0.437 0.220 MuHd_075 : 12.779 15.413 6.275 3.776 MuHd_095 : 21.939 14.832 7.388 4.582 MuHd_100 : 21.077 10.341 7.537 3.262 MuHd_105 : 15.511 8.698 6.280 3.036 Hmax_075 : 19.483 28.000 8.454 7.805 Hmax_095 : 19.100 21.350 4.892 6.685 Hmax_100 : 19.100 19.900 4.892 6.390 Hmax_105 : 14.467 21.583 5.197 7.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9910 0.0090 DFMC : 0.9936 0.0064
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 PF3D7_0311700 MPYFHIFLYILIFCVLVHICPIHTLNIFKNDENEKGSLNIPLGKENNLFFNEIKLENRFKNNIKGYIQNVQKFHYLMEKN 80 KPNVLSYIQEDLLNFHNSQFIADIGVGNPPQVFKVVFDTGSSNLAIPSTKCIKGGCASHKKFNPNKSRTFTKNLKNNQES 160 VYTYIQYGTGTSILEQSYDDVYLKGLKIKHQCIGLAIEESLHPFSDLPFDGIVGLGFSDPDFRSQNKYASPLIETIKKQN 240 LLKRNIFSFYVPKKLEKSGAITFGKANKKYTVEGKSIEWFPVISLYYWEINLLDIQLSHKNLFLCESKKCRAAIDTGSSL 320 ITGPSTFIQPLLEKINLERDCSNKESLPIISFVLKNVEGKEITLDFMPEDYIIEEGDTENNTLECVIGIMPLDVPPPRGP 400 IFIFGNSFIRKYYTIFDNDHKLIGLIEANHNF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0311700 29 HTLNIFK|ND 0.063 . PF3D7_0311700 35 KNDENEK|GS 0.060 . PF3D7_0311700 44 LNIPLGK|EN 0.061 . PF3D7_0311700 54 LFFNEIK|LE 0.059 . PF3D7_0311700 58 EIKLENR|FK 0.082 . PF3D7_0311700 60 KLENRFK|NN 0.073 . PF3D7_0311700 64 RFKNNIK|GY 0.071 . PF3D7_0311700 72 YIQNVQK|FH 0.067 . PF3D7_0311700 79 FHYLMEK|NK 0.061 . PF3D7_0311700 81 YLMEKNK|PN 0.063 . PF3D7_0311700 114 NPPQVFK|VV 0.090 . PF3D7_0311700 130 LAIPSTK|CI 0.073 . PF3D7_0311700 133 PSTKCIK|GG 0.063 . PF3D7_0311700 140 GGCASHK|KF 0.068 . PF3D7_0311700 141 GCASHKK|FN 0.119 . PF3D7_0311700 146 KKFNPNK|SR 0.073 . PF3D7_0311700 148 FNPNKSR|TF 0.102 . PF3D7_0311700 152 KSRTFTK|NL 0.082 . PF3D7_0311700 155 TFTKNLK|NN 0.061 . PF3D7_0311700 184 YDDVYLK|GL 0.062 . PF3D7_0311700 187 VYLKGLK|IK 0.055 . PF3D7_0311700 189 LKGLKIK|HQ 0.084 . PF3D7_0311700 223 FSDPDFR|SQ 0.099 . PF3D7_0311700 227 DFRSQNK|YA 0.089 . PF3D7_0311700 237 PLIETIK|KQ 0.057 . PF3D7_0311700 238 LIETIKK|QN 0.087 . PF3D7_0311700 243 KKQNLLK|RN 0.061 . PF3D7_0311700 244 KQNLLKR|NI 0.181 . PF3D7_0311700 253 FSFYVPK|KL 0.080 . PF3D7_0311700 254 SFYVPKK|LE 0.098 . PF3D7_0311700 257 VPKKLEK|SG 0.071 . PF3D7_0311700 265 GAITFGK|AN 0.068 . PF3D7_0311700 268 TFGKANK|KY 0.071 . PF3D7_0311700 269 FGKANKK|YT 0.105 . PF3D7_0311700 275 KYTVEGK|SI 0.093 . PF3D7_0311700 300 DIQLSHK|NL 0.063 . PF3D7_0311700 308 LFLCESK|KC 0.064 . PF3D7_0311700 309 FLCESKK|CR 0.097 . PF3D7_0311700 311 CESKKCR|AA 0.202 . PF3D7_0311700 334 IQPLLEK|IN 0.053 . PF3D7_0311700 339 EKINLER|DC 0.123 . PF3D7_0311700 344 ERDCSNK|ES 0.065 . PF3D7_0311700 355 IISFVLK|NV 0.127 . PF3D7_0311700 360 LKNVEGK|EI 0.071 . PF3D7_0311700 398 LDVPPPR|GP 0.097 . PF3D7_0311700 410 FGNSFIR|KY 0.092 . PF3D7_0311700 411 GNSFIRK|YY 0.122 . PF3D7_0311700 421 IFDNDHK|LI 0.068 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0311700 ATGCCGTACTTCCATATATTCCTATACATTTTAATTTTTTGTGTTCTTGTTCATATATGT CCTATTCATACTTTAAATATTTTTAAAAATGATGAAAATGAAAAGGGATCTTTAAATATC CCTCTAGGAAAAGAAAACAATTTATTTTTTAATGAAATAAAATTAGAAAATAGATTTAAA AATAATATCAAAGGATATATACAAAATGTTCAGAAATTTCATTATCTTATGGAAAAAAAT AAACCAAATGTATTATCATATATCCAAGAAGATTTATTAAATTTTCATAATAGTCAATTT ATTGCTGATATAGGGGTAGGAAATCCACCTCAAGTATTTAAGGTGGTTTTTGATACAGGG TCCAGTAATCTAGCAATCCCATCAACGAAATGTATCAAGGGAGGTTGTGCTTCCCATAAA AAATTTAATCCTAACAAGTCTAGGACCTTTACCAAAAATTTAAAAAACAATCAAGAATCA GTCTACACATACATTCAATATGGCACAGGAACAAGCATCCTTGAACAATCATATGATGAC GTCTATTTAAAGGGATTAAAAATTAAACATCAATGTATAGGATTAGCCATAGAAGAATCG CTACATCCCTTTTCGGATTTACCCTTTGATGGGATTGTTGGCTTAGGATTTTCCGATCCT GATTTTAGATCTCAAAATAAATATGCCTCCCCATTAATTGAAACCATCAAAAAACAAAAT CTTTTGAAGAGAAATATTTTTTCCTTTTACGTTCCAAAAAAATTAGAAAAGTCAGGTGCA ATTACCTTTGGAAAGGCGAATAAGAAATATACAGTGGAAGGAAAATCAATTGAATGGTTT CCTGTTATATCTTTATATTATTGGGAAATAAATCTTCTAGATATACAACTATCTCACAAA AATTTATTTCTTTGCGAAAGTAAAAAATGTAGAGCTGCAATTGATACAGGATCTAGTTTA ATAACTGGACCGTCTACTTTCATTCAACCGTTATTAGAAAAGATCAATTTAGAGAGGGAC TGTTCAAATAAGGAAAGTTTGCCTATTATTTCATTTGTTTTAAAAAACGTCGAAGGGAAG GAGATTACCTTGGATTTTATGCCGGAAGATTATATAATAGAAGAAGGGGACACTGAGAAT AATACATTAGAATGCGTCATAGGAATAATGCCTCTCGACGTTCCACCTCCCCGAGGCCCA ATTTTCATTTTTGGTAATTCTTTTATAAGAAAATATTACACCATTTTTGATAATGATCAT AAACTCATAGGTCTAATTGAAGCTAATCATAACTTTTAA
  • Download Fasta

  • Fasta :-

    MPYFHIFLYILIFCVLVHICPIHTLNIFKNDENEKGSLNIPLGKENNLFFNEIKLENRFK NNIKGYIQNVQKFHYLMEKNKPNVLSYIQEDLLNFHNSQFIADIGVGNPPQVFKVVFDTG SSNLAIPSTKCIKGGCASHKKFNPNKSRTFTKNLKNNQESVYTYIQYGTGTSILEQSYDD VYLKGLKIKHQCIGLAIEESLHPFSDLPFDGIVGLGFSDPDFRSQNKYASPLIETIKKQN LLKRNIFSFYVPKKLEKSGAITFGKANKKYTVEGKSIEWFPVISLYYWEINLLDIQLSHK NLFLCESKKCRAAIDTGSSLITGPSTFIQPLLEKINLERDCSNKESLPIISFVLKNVEGK EITLDFMPEDYIIEEGDTENNTLECVIGIMPLDVPPPRGPIFIFGNSFIRKYYTIFDNDH KLIGLIEANHNF

  • title: catalytic residue
  • coordinates: D118,D315
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0311700276 SVEGKSIEWF0.994unspPF3D7_0311700342 SERDCSNKES0.994unsp

MAL3P4.14      PFC0495w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India