PF3D7_0317800 | 26S proteasome non-ATPase regulatory subunit 9, putative

UniProt_ID: O77379

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0005515
Computed_GO_Functions: protein binding
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs: GO:0005838
Curated_GO_Components: proteasome regulatory particle
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes: proteasome regulatory particle assembly ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_0317800	OTHER	0.999912	0.000043	0.000046

No Results

Fasta :-
>PF3D7_0317800 MNLEEFNELVKKREDIENELKEHMDFLERPENKNVGMKGNLIDSEGFPRNDIDIYSIRVA RNKIICLKNDYIDINKKLEEYIHKVHSTHPVIRVERKKNINNDLLNTPQQITKEEDIKNA KKNVFAIIDEVIENSPSHKSGLKINDQIFQFGNIIKTNENKKENEHNHPLNVELIKDIAK YMKTQPKQIVVKILREENIFFFHIIPEQTHNGLYLGCHLSPFDSS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0317800.fa Sequence name : PF3D7_0317800 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 3.079 CoefTot : -0.012 ChDiff : -3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.247 1.235 -0.316 0.449 MesoH : -1.779 -0.438 -0.836 0.020 MuHd_075 : 25.819 14.931 6.721 5.219 MuHd_095 : 13.046 9.230 3.692 2.281 MuHd_100 : 23.257 17.375 7.618 4.115 MuHd_105 : 33.495 24.759 11.243 5.833 Hmax_075 : -18.550 -0.700 -6.658 0.653 Hmax_095 : -17.937 -1.750 -6.531 -0.367 Hmax_100 : -13.100 3.800 -4.437 0.780 Hmax_105 : -2.100 11.100 -1.372 2.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9851 0.0149 DFMC : 0.9834 0.0166

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 PF3D7_0317800 MNLEEFNELVKKREDIENELKEHMDFLERPENKNVGMKGNLIDSEGFPRNDIDIYSIRVARNKIICLKNDYIDINKKLEE 80 YIHKVHSTHPVIRVERKKNINNDLLNTPQQITKEEDIKNAKKNVFAIIDEVIENSPSHKSGLKINDQIFQFGNIIKTNEN 160 KKENEHNHPLNVELIKDIAKYMKTQPKQIVVKILREENIFFFHIIPEQTHNGLYLGCHLSPFDSS 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0317800 11 EFNELVK|KR 0.066 . PF3D7_0317800 12 FNELVKK|RE 0.084 . PF3D7_0317800 13 NELVKKR|ED 0.204 . PF3D7_0317800 21 DIENELK|EH 0.057 . PF3D7_0317800 29 HMDFLER|PE 0.077 . PF3D7_0317800 33 LERPENK|NV 0.105 . PF3D7_0317800 38 NKNVGMK|GN 0.067 . PF3D7_0317800 49 DSEGFPR|ND 0.086 . PF3D7_0317800 58 IDIYSIR|VA 0.102 . PF3D7_0317800 61 YSIRVAR|NK 0.281 . PF3D7_0317800 63 IRVARNK|II 0.071 . PF3D7_0317800 68 NKIICLK|ND 0.059 . PF3D7_0317800 76 DYIDINK|KL 0.060 . PF3D7_0317800 77 YIDINKK|LE 0.079 . PF3D7_0317800 84 LEEYIHK|VH 0.061 . PF3D7_0317800 93 STHPVIR|VE 0.097 . PF3D7_0317800 96 PVIRVER|KK 0.175 . PF3D7_0317800 97 VIRVERK|KN 0.081 . PF3D7_0317800 98 IRVERKK|NI 0.117 . PF3D7_0317800 113 TPQQITK|EE 0.066 . PF3D7_0317800 118 TKEEDIK|NA 0.071 . PF3D7_0317800 121 EDIKNAK|KN 0.060 . PF3D7_0317800 122 DIKNAKK|NV 0.161 . PF3D7_0317800 139 ENSPSHK|SG 0.108 . PF3D7_0317800 143 SHKSGLK|IN 0.067 . PF3D7_0317800 156 QFGNIIK|TN 0.066 . PF3D7_0317800 161 IKTNENK|KE 0.061 . PF3D7_0317800 162 KTNENKK|EN 0.106 . PF3D7_0317800 176 LNVELIK|DI 0.091 . PF3D7_0317800 180 LIKDIAK|YM 0.074 . PF3D7_0317800 183 DIAKYMK|TQ 0.065 . PF3D7_0317800 187 YMKTQPK|QI 0.071 . PF3D7_0317800 192 PKQIVVK|IL 0.071 . PF3D7_0317800 195 IVVKILR|EE 0.074 . ____________________________^_________________

Fasta :-
>PF3D7_0317800 ATGAATTTGGAAGAGTTTAATGAATTAGTCAAGAAAAGAGAAGATATTGAAAATGAGTTA AAGGAACATATGGATTTTTTAGAAAGACCTGAGAATAAGAATGTGGGTATGAAAGGGAAT TTGATTGATTCCGAAGGATTTCCAAGGAATGATATTGACATATATAGTATTCGTGTGGCT CGAAATAAGATAATATGTTTAAAAAACGATTATATAGATATAAATAAGAAACTCGAAGAA TATATACATAAAGTACATAGTACTCATCCAGTTATACGTGTAGAACGAAAGAAAAATATA AATAATGATTTATTAAATACACCACAACAAATAACCAAAGAAGAAGATATTAAAAATGCA AAGAAAAATGTATTTGCCATTATAGATGAAGTTATAGAAAATTCACCATCTCATAAATCT GGATTAAAAATAAATGATCAGATTTTTCAATTTGGAAATATTATTAAAACAAACGAAAAT AAAAAAGAAAATGAGCATAACCATCCCTTAAATGTAGAACTCATTAAAGATATAGCAAAG TATATGAAAACACAACCTAAACAAATAGTAGTTAAAATATTAAGAGAAGAAAATATTTTT TTTTTTCATATTATTCCTGAACAAACACATAATGGTTTATATTTAGGATGTCACTTATCT CCATTCGACAGTTCCTAA
Download Fasta

Fasta :-

MNLEEFNELVKKREDIENELKEHMDFLERPENKNVGMKGNLIDSEGFPRNDIDIYSIRVA RNKIICLKNDYIDINKKLEEYIHKVHSTHPVIRVERKKNINNDLLNTPQQITKEEDIKNA KKNVFAIIDEVIENSPSHKSGLKINDQIFQFGNIIKTNENKKENEHNHPLNVELIKDIAK YMKTQPKQIVVKILREENIFFFHIIPEQTHNGLYLGCHLSPFDSS

HtrA-like serine proteases

No Results

PF3D7_0317800.pdb

PF3D7_0317800_site1.pdb

PF3D7_0317800_site2.pdb

PF3D7_0317800_site3.pdb

No Results

	ID	Site	Peptide	Score	Method
	PF3D7_0317800	137 S	ENSPSHKSG	0.992	unsp

PF3D7_0317800 | 26S proteasome non-ATPase regulatory subunit 9, putative

ID's

UniProt_ID: O77379

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0005515

Computed_GO_Functions: protein binding

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs: GO:0005838

Curated_GO_Components: proteasome regulatory particle

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes: proteasome regulatory particle assembly ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

HtrA-like serine proteases

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

MAL3P6.16 PFC0785c

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India