PF3D7_0403500 | ubiquitin specific protease, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0403500OTHER0.9999780.0000160.000006
No Results

  • Fasta :-

    >PF3D7_0403500 MNITENNLLELLSLKNYDYYLKYYNYEHVERKHISFNNSGNICYCNASLQLILSIKPLCI YLLKKLKKISFNTKSKYKGDILKTVCDLIEEVYGKTNSDSNNNNNNSNSNNKNKSYIICT NKHINLLKKIKKYNNNIIINAQNDAHEFLLMLLNFINVECNRYLKIPENFDIKLNDKDNK QNAGDKYWIKYLFKDNSIVTDLLGFQNISSITCINCGHTRYSFEFCIDLGLEFHEENMKS TNLIDLLKNNIIQEEHFCYLDCENCKLKKTSRVKKGIYRLPNLYMIIYIKRFKWIYDQRT NYYNNKIKKIDTTVLLPLDGIIDFTSFSHMSTHKSLINSKYIIESIICHTGNCYNGHYTC IVKYSDGFYKCNDEKIRKINNPYSSENINDIYLLLLRRLP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0403500.fa Sequence name : PF3D7_0403500 Sequence length : 400 VALUES OF COMPUTED PARAMETERS Coef20 : 3.403 CoefTot : -0.134 ChDiff : 15 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.006 1.688 0.167 0.552 MesoH : -0.821 0.020 -0.450 0.142 MuHd_075 : 22.089 15.297 8.193 4.600 MuHd_095 : 18.759 11.437 4.575 2.173 MuHd_100 : 7.103 9.002 1.842 1.289 MuHd_105 : 7.896 7.403 2.855 1.840 Hmax_075 : 4.100 10.900 0.335 3.570 Hmax_095 : 0.525 7.800 -2.227 2.370 Hmax_100 : -4.000 5.200 -3.377 1.650 Hmax_105 : -1.000 5.600 -2.369 2.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9839 0.0161 DFMC : 0.9906 0.0094
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 400 PF3D7_0403500 MNITENNLLELLSLKNYDYYLKYYNYEHVERKHISFNNSGNICYCNASLQLILSIKPLCIYLLKKLKKISFNTKSKYKGD 80 ILKTVCDLIEEVYGKTNSDSNNNNNNSNSNNKNKSYIICTNKHINLLKKIKKYNNNIIINAQNDAHEFLLMLLNFINVEC 160 NRYLKIPENFDIKLNDKDNKQNAGDKYWIKYLFKDNSIVTDLLGFQNISSITCINCGHTRYSFEFCIDLGLEFHEENMKS 240 TNLIDLLKNNIIQEEHFCYLDCENCKLKKTSRVKKGIYRLPNLYMIIYIKRFKWIYDQRTNYYNNKIKKIDTTVLLPLDG 320 IIDFTSFSHMSTHKSLINSKYIIESIICHTGNCYNGHYTCIVKYSDGFYKCNDEKIRKINNPYSSENINDIYLLLLRRLP 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0403500 15 LELLSLK|NY 0.059 . PF3D7_0403500 22 NYDYYLK|YY 0.056 . PF3D7_0403500 31 NYEHVER|KH 0.074 . PF3D7_0403500 32 YEHVERK|HI 0.109 . PF3D7_0403500 56 QLILSIK|PL 0.066 . PF3D7_0403500 64 LCIYLLK|KL 0.059 . PF3D7_0403500 65 CIYLLKK|LK 0.093 . PF3D7_0403500 67 YLLKKLK|KI 0.064 . PF3D7_0403500 68 LLKKLKK|IS 0.090 . PF3D7_0403500 74 KISFNTK|SK 0.099 . PF3D7_0403500 76 SFNTKSK|YK 0.128 . PF3D7_0403500 78 NTKSKYK|GD 0.062 . PF3D7_0403500 83 YKGDILK|TV 0.081 . PF3D7_0403500 95 IEEVYGK|TN 0.069 . PF3D7_0403500 112 NSNSNNK|NK 0.075 . PF3D7_0403500 114 NSNNKNK|SY 0.113 . PF3D7_0403500 122 YIICTNK|HI 0.060 . PF3D7_0403500 128 KHINLLK|KI 0.069 . PF3D7_0403500 129 HINLLKK|IK 0.097 . PF3D7_0403500 131 NLLKKIK|KY 0.062 . PF3D7_0403500 132 LLKKIKK|YN 0.114 . PF3D7_0403500 162 INVECNR|YL 0.091 . PF3D7_0403500 165 ECNRYLK|IP 0.089 . PF3D7_0403500 173 PENFDIK|LN 0.063 . PF3D7_0403500 177 DIKLNDK|DN 0.065 . PF3D7_0403500 180 LNDKDNK|QN 0.064 . PF3D7_0403500 186 KQNAGDK|YW 0.075 . PF3D7_0403500 190 GDKYWIK|YL 0.071 . PF3D7_0403500 194 WIKYLFK|DN 0.079 . PF3D7_0403500 220 INCGHTR|YS 0.094 . PF3D7_0403500 239 FHEENMK|ST 0.069 . PF3D7_0403500 248 NLIDLLK|NN 0.066 . PF3D7_0403500 266 LDCENCK|LK 0.059 . PF3D7_0403500 268 CENCKLK|KT 0.081 . PF3D7_0403500 269 ENCKLKK|TS 0.090 . PF3D7_0403500 272 KLKKTSR|VK 0.084 . PF3D7_0403500 274 KKTSRVK|KG 0.059 . PF3D7_0403500 275 KTSRVKK|GI 0.497 . PF3D7_0403500 279 VKKGIYR|LP 0.071 . PF3D7_0403500 290 YMIIYIK|RF 0.059 . PF3D7_0403500 291 MIIYIKR|FK 0.171 . PF3D7_0403500 293 IYIKRFK|WI 0.076 . PF3D7_0403500 299 KWIYDQR|TN 0.079 . PF3D7_0403500 306 TNYYNNK|IK 0.063 . PF3D7_0403500 308 YYNNKIK|KI 0.074 . PF3D7_0403500 309 YNNKIKK|ID 0.130 . PF3D7_0403500 334 SHMSTHK|SL 0.087 . PF3D7_0403500 340 KSLINSK|YI 0.070 . PF3D7_0403500 363 HYTCIVK|YS 0.059 . PF3D7_0403500 370 YSDGFYK|CN 0.073 . PF3D7_0403500 375 YKCNDEK|IR 0.058 . PF3D7_0403500 377 CNDEKIR|KI 0.088 . PF3D7_0403500 378 NDEKIRK|IN 0.071 . PF3D7_0403500 397 IYLLLLR|RL 0.063 . PF3D7_0403500 398 YLLLLRR|LP 0.081 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0403500 ATGAATATTACCGAAAATAACCTTCTCGAGCTCCTATCATTAAAAAATTATGATTATTAT TTAAAATATTATAACTATGAACATGTTGAAAGAAAACACATTTCGTTTAATAACAGCGGG AACATATGTTACTGTAACGCTTCTTTACAATTAATATTATCTATAAAACCTTTGTGTATT TATTTATTGAAAAAATTAAAAAAAATATCTTTTAATACAAAATCTAAATATAAAGGAGAT ATATTAAAAACTGTTTGTGATTTAATAGAAGAAGTATATGGGAAAACCAACTCAGATAGT AATAATAATAATAATAATAGTAATAGTAATAATAAAAATAAAAGTTATATAATTTGTACA AATAAACATATAAATTTATTAAAAAAAATTAAAAAATATAATAATAATATTATAATTAAT GCTCAAAATGATGCACATGAATTTTTATTGATGTTATTAAATTTTATAAATGTGGAATGT AATAGATATTTAAAGATACCAGAAAACTTCGATATAAAATTAAATGATAAAGATAATAAA CAAAATGCTGGAGATAAGTATTGGATAAAATATTTATTTAAAGATAACAGTATTGTGACC GACTTATTAGGCTTTCAAAATATTTCAAGTATTACATGTATTAATTGTGGACATACCAGA TATAGTTTTGAATTCTGTATTGACTTAGGTTTAGAGTTTCACGAAGAAAATATGAAAAGT ACAAATCTTATAGACCTATTAAAAAATAATATTATACAAGAAGAACATTTCTGTTATTTA GATTGTGAAAATTGTAAATTAAAAAAAACAAGTCGAGTTAAAAAAGGAATATATAGATTG CCAAACTTGTATATGATTATTTATATTAAAAGATTTAAATGGATATATGATCAACGTACA AATTATTATAATAATAAAATCAAAAAAATTGATACTACTGTTTTGTTACCATTAGATGGT ATTATTGATTTTACATCCTTTTCACATATGTCAACTCATAAATCATTAATTAATTCAAAA TATATTATAGAAAGTATTATATGTCATACAGGAAATTGTTATAATGGTCATTATACTTGT ATTGTTAAATATAGTGATGGATTTTATAAATGTAACGATGAAAAAATTAGGAAAATAAAC AATCCATACAGCTCAGAAAATATTAACGACATATATTTGTTGCTACTCAGGCGATTACCC TAA
  • Download Fasta

  • Fasta :-

    MNITENNLLELLSLKNYDYYLKYYNYEHVERKHISFNNSGNICYCNASLQLILSIKPLCI YLLKKLKKISFNTKSKYKGDILKTVCDLIEEVYGKTNSDSNNNNNNSNSNNKNKSYIICT NKHINLLKKIKKYNNNIIINAQNDAHEFLLMLLNFINVECNRYLKIPENFDIKLNDKDNK QNAGDKYWIKYLFKDNSIVTDLLGFQNISSITCINCGHTRYSFEFCIDLGLEFHEENMKS TNLIDLLKNNIIQEEHFCYLDCENCKLKKTSRVKKGIYRLPNLYMIIYIKRFKWIYDQRT NYYNNKIKKIDTTVLLPLDGIIDFTSFSHMSTHKSLINSKYIIESIICHTGNCYNGHYTC IVKYSDGFYKCNDEKIRKINNPYSSENINDIYLLLLRRLP

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MAL4P1.33      PFD0165w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India