PF3D7_0413600 | 26S protease regulatory subunit 6B, putative

UniProt_ID: Q8I1V1

Computed_GO_Component_IDs: GO:0005737
Computed_GO_Components: cytoplasm
Computed_GO_Function_IDs: GO:0005524 GO:0016787
Computed_GO_Functions: ATP binding hydrolase activity
Computed_GO_Process_IDs: GO:0030163
Computed_GO_Processes: protein catabolic process
Curated_GO_Component_IDs: GO:0005634 GO:0008540
Curated_GO_Components: nucleus proteasome regulatory particle, base subcomplex
Curated_GO_Function_IDs: GO:0016887
Curated_GO_Functions: ATPase activity
Curated_GO_Processes: proteasome regulatory particle assembly ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_0413600	OTHER	0.999988	0.000008	0.000004

No Results

Fasta :-
>PF3D7_0413600 MESVSKCLTEEDYYIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPL IIGQFLDIIDNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSES DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAI RKNRYIITANDFEQGYRTHVRKQLRDYEFYNI
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0413600.fa Sequence name : PF3D7_0413600 Sequence length : 392 VALUES OF COMPUTED PARAMETERS Coef20 : 3.732 CoefTot : 0.000 ChDiff : 0 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.147 0.033 0.542 MesoH : -0.535 0.297 -0.358 0.251 MuHd_075 : 30.963 10.682 6.973 4.926 MuHd_095 : 16.829 16.116 6.593 3.223 MuHd_100 : 17.846 16.644 5.756 4.512 MuHd_105 : 23.872 18.350 6.676 6.040 Hmax_075 : 0.500 5.100 -1.561 2.088 Hmax_095 : -5.900 7.200 -0.743 2.070 Hmax_100 : -3.100 9.500 -1.181 2.420 Hmax_105 : -1.050 7.175 0.237 2.231 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7639 0.2361 DFMC : 0.8161 0.1839

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 392 PF3D7_0413600 MESVSKCLTEEDYYIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLDIIDNNYGIVSSTA 80 GSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTC 160 PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQT 320 IISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQGYRTHVRKQLRDYEFYNI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0413600 6 -MESVSK|CL 0.062 . PF3D7_0413600 16 EEDYYIR|LK 0.064 . PF3D7_0413600 18 DYYIRLK|NL 0.062 . PF3D7_0413600 21 IRLKNLK|KQ 0.070 . PF3D7_0413600 22 RLKNLKK|QI 0.117 . PF3D7_0413600 35 IQEDYIK|EE 0.060 . PF3D7_0413600 39 YIKEEHK|NL 0.064 . PF3D7_0413600 42 EEHKNLK|RE 0.054 . PF3D7_0413600 43 EHKNLKR|EL 0.136 . PF3D7_0413600 47 LKRELIR|SK 0.137 . PF3D7_0413600 49 RELIRSK|NE 0.059 . PF3D7_0413600 53 RSKNEIK|RI 0.066 . PF3D7_0413600 54 SKNEIKR|IQ 0.190 . PF3D7_0413600 87 GSNYYVR|IL 0.107 . PF3D7_0413600 94 ILSTLNK|ED 0.058 . PF3D7_0413600 98 LNKEDLK|PS 0.058 . PF3D7_0413600 107 VSVALHR|HS 0.101 . PF3D7_0413600 132 LLQITER|PN 0.085 . PF3D7_0413600 136 TERPNVK|YT 0.084 . PF3D7_0413600 147 GGLDMQK|QE 0.057 . PF3D7_0413600 151 MQKQEMK|EA 0.067 . PF3D7_0413600 166 CPELYEK|IG 0.057 . PF3D7_0413600 185 GPPGTGK|TM 0.058 . PF3D7_0413600 190 GKTMLVK|AV 0.074 . PF3D7_0413600 211 GSEFVQK|YL 0.136 . PF3D7_0413600 218 YLGEGPR|MV 0.154 . PF3D7_0413600 221 EGPRMVR|DV 0.294 . PF3D7_0413600 225 MVRDVFR|LA 0.120 . PF3D7_0413600 228 DVFRLAR|EN 0.259 . PF3D7_0413600 246 VDAIATK|RF 0.064 . PF3D7_0413600 247 DAIATKR|FD 0.186 . PF3D7_0413600 256 AQTGADR|EV 0.095 . PF3D7_0413600 260 ADREVQR|IL 0.115 . PF3D7_0413600 274 QMDGFDK|ST 0.080 . PF3D7_0413600 279 DKSTNVK|VI 0.070 . PF3D7_0413600 286 VIMATNR|AD 0.076 . PF3D7_0413600 296 LDPALLR|PG 0.069 . PF3D7_0413600 299 ALLRPGR|LD 0.217 . PF3D7_0413600 302 RPGRLDR|KI 0.309 . PF3D7_0413600 303 PGRLDRK|IE 0.069 . PF3D7_0413600 311 EFPLPDR|KQ 0.064 . PF3D7_0413600 312 FPLPDRK|QK 0.075 . PF3D7_0413600 314 LPDRKQK|RL 0.141 . PF3D7_0413600 315 PDRKQKR|LI 0.299 . PF3D7_0413600 324 FQTIISK|MN 0.055 . PF3D7_0413600 339 IESFVVR|TD 0.101 . PF3D7_0413600 342 FVVRTDK|IS 0.106 . PF3D7_0413600 361 AGMQAIR|KN 0.081 . PF3D7_0413600 362 GMQAIRK|NR 0.079 . PF3D7_0413600 364 QAIRKNR|YI 0.431 . PF3D7_0413600 377 DFEQGYR|TH 0.064 . PF3D7_0413600 381 GYRTHVR|KQ 0.079 . PF3D7_0413600 382 YRTHVRK|QL 0.137 . PF3D7_0413600 385 HVRKQLR|DY 0.126 . ____________________________^_________________

Fasta :-
>PF3D7_0413600 ATGGAAAGTGTAAGTAAATGTTTAACTGAAGAAGATTATTATATAAGATTGAAAAATTTA AAAAAACAAATTGACATTTTAAATATCCAAGAGGATTATATTAAAGAAGAACATAAAAAT TTGAAAAGAGAATTAATAAGGTCAAAAAATGAAATAAAAAGAATACAAAGTGTACCCCTA ATTATAGGTCAATTTTTAGATATTATTGATAACAATTATGGGATAGTAAGTAGTACGGCA GGTTCAAATTATTATGTAAGAATACTGTCGACTTTAAATAAGGAGGATTTGAAACCGTCA GTCAGTGTAGCTTTACACAGACATAGTCATTCAATAGTAAATATTTTACCATCTGAATCA GATAGTAGTATACAATTATTACAAATTACTGAAAGACCAAATGTGAAATATACAGATTTA GGTGGATTAGATATGCAAAAACAAGAAATGAAAGAAGCCGTTGAATTACCTTTAACTTGT CCAGAATTATATGAAAAAATTGGAATTGAACCACCAATGGGTATTTTAATTTATGGTCCA CCAGGTACCGGTAAAACTATGTTAGTTAAAGCGGTGGCTAATGAAACTCAGGTTACCTTT ATTGGTGTTGTTGGATCTGAATTTGTTCAAAAATATTTAGGAGAAGGACCAAGAATGGTA CGTGATGTATTCAGATTGGCTAGAGAAAATTCTCCATCGATTATTTTTATAGATGAAGTA GATGCCATAGCTACTAAGAGATTTGATGCACAAACAGGTGCAGATAGAGAAGTTCAAAGA ATTTTATTGGAATTATTAAATCAAATGGATGGTTTCGATAAATCTACTAATGTTAAAGTT ATTATGGCTACTAACAGAGCAGATACTTTAGATCCTGCTTTATTAAGACCAGGAAGATTA GATAGAAAAATCGAATTCCCTTTACCCGATAGAAAACAAAAAAGATTAATCTTCCAAACC ATTATTAGTAAAATGAATGTTAGTAGTGATGTAAATATAGAAAGTTTTGTAGTAAGAACG GATAAAATCAGTGCAGCTGATATTGCTGCCATAGCACAAGAAGCAGGTATGCAAGCTATA AGAAAAAATAGATATATTATTACAGCCAATGATTTTGAACAGGGATACAGAACACATGTT AGAAAGCAATTAAGAGATTACGAATTTTATAATATATAA
Download Fasta

Fasta :-

MESVSKCLTEEDYYIRLKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPL IIGQFLDIIDNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSES DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAI RKNRYIITANDFEQGYRTHVRKQLRDYEFYNI