PF3D7_0517700 | eukaryotic translation initiation factor 3 subunit B, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0517700OTHER0.9998860.0000940.000020
No Results

  • Fasta :-

    >PF3D7_0517700 MVRVSDNELSDKELVDFLSEDSDNGDENLLNKKYSDKEALITLEVDFPKIVTILGIPKVE SEKHGRLAEVLKKLFIRHLSAKISDSSLLNMKIHMPTDEENKTKGICFVTFNDSFQANEA VKILNKLKLDAKHILTTSKMDDIENIINRDEKAMPINVVGFTREKIRWWLYDEKCREQFI VRYDSHFEVHWFDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDSF EKLIRLQHKSVKEIMFSPNENYVLTWDGTPYSLRNEKSICIWRVITGKLLRSFITPEYSP KEKMFPHFLWSPDDKYIACIGKQKEVYVYELPSMLLIEDQEKKRTPLKYSGVKEFDWSPV DNILAIWIPQTNDTPGTLILVDVPSRKELVSRKIYDVSVASIHWHNKGDYLCLKTTIQKK SGKKIKKEYTQLEIFRMREKNIPVDNVQIEAVKTKQFHWEESNSNRFALILREETTNKQQ IRFYKISNKGTARDAKWSSTFDINNQMNFMKWSPQGTYFILASLASEGTLYFCCLNNNDE VDVIHKDEHLLVNSISWSRCGRFLVSAVSNNPNAFNTGYREENSEAGFHIWTFQGKCLMR IKKPSFIQFLFRPHPKSLFNDKLKLDIKNNLNNYSKKFDNIDEKMKTAKKNALLTERKNV ENSFNQKFQEITALFQSYQEYEQLKKNWETFENQFEWEEKTIVIEHVLSVKEEIFA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0517700.fa Sequence name : PF3D7_0517700 Sequence length : 716 VALUES OF COMPUTED PARAMETERS Coef20 : 3.683 CoefTot : 0.247 ChDiff : 4 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.376 1.553 0.322 0.568 MesoH : -0.758 0.069 -0.460 0.135 MuHd_075 : 39.506 20.962 11.239 6.233 MuHd_095 : 15.522 7.753 3.857 3.071 MuHd_100 : 6.282 5.141 1.558 1.301 MuHd_105 : 23.747 14.827 5.063 4.893 Hmax_075 : 14.933 16.800 2.858 4.713 Hmax_095 : -1.837 9.275 -1.616 3.308 Hmax_100 : -10.800 5.500 -4.045 1.980 Hmax_105 : 1.300 9.500 -1.761 3.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6465 0.3535 DFMC : 0.8283 0.1717
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 716 PF3D7_0517700 MVRVSDNELSDKELVDFLSEDSDNGDENLLNKKYSDKEALITLEVDFPKIVTILGIPKVESEKHGRLAEVLKKLFIRHLS 80 AKISDSSLLNMKIHMPTDEENKTKGICFVTFNDSFQANEAVKILNKLKLDAKHILTTSKMDDIENIINRDEKAMPINVVG 160 FTREKIRWWLYDEKCREQFIVRYDSHFEVHWFDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDSF 240 EKLIRLQHKSVKEIMFSPNENYVLTWDGTPYSLRNEKSICIWRVITGKLLRSFITPEYSPKEKMFPHFLWSPDDKYIACI 320 GKQKEVYVYELPSMLLIEDQEKKRTPLKYSGVKEFDWSPVDNILAIWIPQTNDTPGTLILVDVPSRKELVSRKIYDVSVA 400 SIHWHNKGDYLCLKTTIQKKSGKKIKKEYTQLEIFRMREKNIPVDNVQIEAVKTKQFHWEESNSNRFALILREETTNKQQ 480 IRFYKISNKGTARDAKWSSTFDINNQMNFMKWSPQGTYFILASLASEGTLYFCCLNNNDEVDVIHKDEHLLVNSISWSRC 560 GRFLVSAVSNNPNAFNTGYREENSEAGFHIWTFQGKCLMRIKKPSFIQFLFRPHPKSLFNDKLKLDIKNNLNNYSKKFDN 640 IDEKMKTAKKNALLTERKNVENSFNQKFQEITALFQSYQEYEQLKKNWETFENQFEWEEKTIVIEHVLSVKEEIFA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0517700 3 ----MVR|VS 0.090 . PF3D7_0517700 12 DNELSDK|EL 0.061 . PF3D7_0517700 32 DENLLNK|KY 0.074 . PF3D7_0517700 33 ENLLNKK|YS 0.094 . PF3D7_0517700 37 NKKYSDK|EA 0.069 . PF3D7_0517700 49 LEVDFPK|IV 0.079 . PF3D7_0517700 58 TILGIPK|VE 0.058 . PF3D7_0517700 63 PKVESEK|HG 0.062 . PF3D7_0517700 66 ESEKHGR|LA 0.107 . PF3D7_0517700 72 RLAEVLK|KL 0.066 . PF3D7_0517700 73 LAEVLKK|LF 0.090 . PF3D7_0517700 77 LKKLFIR|HL 0.143 . PF3D7_0517700 82 IRHLSAK|IS 0.107 . PF3D7_0517700 92 SSLLNMK|IH 0.057 . PF3D7_0517700 102 PTDEENK|TK 0.065 . PF3D7_0517700 104 DEENKTK|GI 0.081 . PF3D7_0517700 122 QANEAVK|IL 0.064 . PF3D7_0517700 126 AVKILNK|LK 0.058 . PF3D7_0517700 128 KILNKLK|LD 0.063 . PF3D7_0517700 132 KLKLDAK|HI 0.064 . PF3D7_0517700 139 HILTTSK|MD 0.061 . PF3D7_0517700 149 IENIINR|DE 0.106 . PF3D7_0517700 152 IINRDEK|AM 0.134 . PF3D7_0517700 163 NVVGFTR|EK 0.073 . PF3D7_0517700 165 VGFTREK|IR 0.054 . PF3D7_0517700 167 FTREKIR|WW 0.100 . PF3D7_0517700 174 WWLYDEK|CR 0.060 . PF3D7_0517700 176 LYDEKCR|EQ 0.085 . PF3D7_0517700 182 REQFIVR|YD 0.115 . PF3D7_0517700 197 WFDPLEK|EP 0.058 . PF3D7_0517700 207 LIYTTFK|KN 0.060 . PF3D7_0517700 208 IYTTFKK|NA 0.089 . PF3D7_0517700 242 GGDSFEK|LI 0.060 . PF3D7_0517700 245 SFEKLIR|LQ 0.088 . PF3D7_0517700 249 LIRLQHK|SV 0.157 . PF3D7_0517700 252 LQHKSVK|EI 0.075 . PF3D7_0517700 274 GTPYSLR|NE 0.069 . PF3D7_0517700 277 YSLRNEK|SI 0.197 . PF3D7_0517700 283 KSICIWR|VI 0.096 . PF3D7_0517700 288 WRVITGK|LL 0.066 . PF3D7_0517700 291 ITGKLLR|SF 0.127 . PF3D7_0517700 301 TPEYSPK|EK 0.062 . PF3D7_0517700 303 EYSPKEK|MF 0.076 . PF3D7_0517700 315 LWSPDDK|YI 0.107 . PF3D7_0517700 322 YIACIGK|QK 0.067 . PF3D7_0517700 324 ACIGKQK|EV 0.077 . PF3D7_0517700 342 LIEDQEK|KR 0.058 . PF3D7_0517700 343 IEDQEKK|RT 0.076 . PF3D7_0517700 344 EDQEKKR|TP 0.122 . PF3D7_0517700 348 KKRTPLK|YS 0.103 . PF3D7_0517700 353 LKYSGVK|EF 0.062 . PF3D7_0517700 386 LVDVPSR|KE 0.068 . PF3D7_0517700 387 VDVPSRK|EL 0.069 . PF3D7_0517700 392 RKELVSR|KI 0.111 . PF3D7_0517700 393 KELVSRK|IY 0.094 . PF3D7_0517700 407 SIHWHNK|GD 0.079 . PF3D7_0517700 414 GDYLCLK|TT 0.066 . PF3D7_0517700 419 LKTTIQK|KS 0.067 . PF3D7_0517700 420 KTTIQKK|SG 0.128 . PF3D7_0517700 423 IQKKSGK|KI 0.080 . PF3D7_0517700 424 QKKSGKK|IK 0.084 . PF3D7_0517700 426 KSGKKIK|KE 0.086 . PF3D7_0517700 427 SGKKIKK|EY 0.127 . PF3D7_0517700 436 TQLEIFR|MR 0.101 . PF3D7_0517700 438 LEIFRMR|EK 0.086 . PF3D7_0517700 440 IFRMREK|NI 0.063 . PF3D7_0517700 453 VQIEAVK|TK 0.055 . PF3D7_0517700 455 IEAVKTK|QF 0.096 . PF3D7_0517700 466 EESNSNR|FA 0.139 . PF3D7_0517700 472 RFALILR|EE 0.074 . PF3D7_0517700 478 REETTNK|QQ 0.058 . PF3D7_0517700 482 TNKQQIR|FY 0.149 . PF3D7_0517700 485 QQIRFYK|IS 0.171 . PF3D7_0517700 489 FYKISNK|GT 0.065 . PF3D7_0517700 493 SNKGTAR|DA 0.172 . PF3D7_0517700 496 GTARDAK|WS 0.176 . PF3D7_0517700 511 NQMNFMK|WS 0.077 . PF3D7_0517700 546 EVDVIHK|DE 0.062 . PF3D7_0517700 559 NSISWSR|CG 0.069 . PF3D7_0517700 562 SWSRCGR|FL 0.363 . PF3D7_0517700 580 AFNTGYR|EE 0.078 . PF3D7_0517700 596 IWTFQGK|CL 0.070 . PF3D7_0517700 600 QGKCLMR|IK 0.099 . PF3D7_0517700 602 KCLMRIK|KP 0.063 . PF3D7_0517700 603 CLMRIKK|PS 0.332 . PF3D7_0517700 612 FIQFLFR|PH 0.095 . PF3D7_0517700 616 LFRPHPK|SL 0.084 . PF3D7_0517700 622 KSLFNDK|LK 0.063 . PF3D7_0517700 624 LFNDKLK|LD 0.062 . PF3D7_0517700 628 KLKLDIK|NN 0.054 . PF3D7_0517700 636 NLNNYSK|KF 0.069 . PF3D7_0517700 637 LNNYSKK|FD 0.173 . PF3D7_0517700 644 FDNIDEK|MK 0.068 . PF3D7_0517700 646 NIDEKMK|TA 0.063 . PF3D7_0517700 649 EKMKTAK|KN 0.065 . PF3D7_0517700 650 KMKTAKK|NA 0.080 . PF3D7_0517700 657 NALLTER|KN 0.065 . PF3D7_0517700 658 ALLTERK|NV 0.110 . PF3D7_0517700 667 ENSFNQK|FQ 0.072 . PF3D7_0517700 685 QEYEQLK|KN 0.063 . PF3D7_0517700 686 EYEQLKK|NW 0.116 . PF3D7_0517700 700 QFEWEEK|TI 0.061 . PF3D7_0517700 711 EHVLSVK|EE 0.058 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0517700 ATGGTACGAGTTAGCGATAACGAATTGAGTGATAAGGAGTTGGTAGATTTTTTATCAGAA GATAGTGATAATGGTGATGAGAATTTATTAAATAAAAAATATTCTGATAAAGAAGCATTA ATAACTTTAGAAGTAGATTTTCCTAAGATTGTAACTATATTAGGTATACCAAAAGTTGAA TCAGAGAAACATGGGAGGTTAGCTGAAGTATTGAAGAAATTATTTATAAGACATTTAAGT GCTAAGATTAGTGATTCTTCTTTATTAAATATGAAAATTCATATGCCTACTGATGAAGAG AATAAAACCAAAGGTATATGTTTTGTAACGTTTAATGATAGTTTTCAAGCAAATGAAGCT GTGAAGATTTTAAATAAATTAAAATTAGATGCTAAACATATATTAACTACTTCAAAAATG GATGATATAGAAAATATTATTAATAGAGATGAGAAAGCTATGCCTATTAATGTTGTTGGT TTTACTCGAGAAAAAATTAGATGGTGGCTATATGATGAAAAATGTAGAGAACAATTTATT GTTAGATATGATAGTCATTTTGAAGTCCATTGGTTTGATCCTTTAGAAAAAGAACCGCAA TTAATATATACGACTTTTAAAAAAAACGCACCTTTTTCAAGTGTTCAATGGAGTAATCAA GGTTCTTATTTAGTTAGCTTTCATAATCCAGGGATAGCTTTATGGGGTGGAGATAGTTTT GAGAAATTAATTAGATTACAACATAAAAGCGTTAAAGAAATCATGTTTTCTCCGAACGAA AATTATGTATTAACTTGGGATGGTACTCCTTATTCATTAAGGAATGAAAAATCTATTTGT ATTTGGAGAGTTATCACAGGAAAATTACTTCGTTCTTTTATTACTCCAGAATATAGTCCT AAAGAAAAAATGTTTCCACATTTCTTGTGGAGTCCAGATGATAAATATATTGCATGTATA GGAAAACAAAAAGAAGTCTATGTGTATGAATTACCATCTATGTTATTAATTGAAGATCAA GAAAAAAAAAGAACACCTCTAAAATATTCAGGTGTAAAAGAATTCGATTGGTCACCTGTC GATAATATTCTAGCTATATGGATTCCACAAACTAATGATACACCAGGTACATTAATTCTT GTTGATGTACCATCTAGAAAAGAATTAGTTTCAAGGAAAATATATGATGTCAGTGTTGCT TCTATACATTGGCATAATAAAGGTGATTATCTATGTTTAAAAACAACCATTCAAAAAAAA TCAGGTAAAAAAATCAAAAAGGAATATACACAACTAGAAATATTCCGTATGAGAGAAAAA AACATACCAGTAGATAATGTACAAATTGAAGCTGTTAAAACAAAACAATTCCATTGGGAA GAATCAAACAGTAATCGTTTTGCACTTATCCTCAGAGAAGAAACAACTAATAAACAACAA ATCAGATTCTATAAAATATCCAATAAAGGAACAGCCAGAGATGCTAAATGGTCCAGTACA TTTGATATCAATAATCAAATGAATTTTATGAAATGGTCACCACAAGGAACATATTTTATA TTAGCATCATTAGCATCAGAAGGTACACTCTATTTCTGTTGTTTAAATAATAATGATGAA GTAGATGTTATACATAAAGATGAACATCTATTAGTTAATTCTATATCCTGGAGTCGTTGT GGAAGATTCCTAGTCTCAGCTGTTTCCAATAATCCAAATGCTTTTAATACTGGTTATAGA GAAGAAAATAGTGAAGCAGGATTTCATATATGGACTTTTCAAGGCAAATGTCTTATGAGA ATTAAAAAACCATCATTTATTCAATTCTTATTTAGACCACATCCAAAGTCATTATTTAAT GATAAACTTAAACTAGATATTAAAAATAATCTAAATAATTATTCGAAAAAATTCGATAAT ATAGATGAAAAAATGAAAACAGCAAAGAAAAATGCATTACTCACAGAAAGAAAAAATGTA GAAAATTCATTCAACCAAAAATTTCAAGAAATTACTGCACTCTTCCAATCCTATCAAGAG TATGAACAACTTAAAAAAAATTGGGAAACATTCGAGAACCAATTTGAGTGGGAAGAAAAA ACAATAGTCATCGAGCATGTACTGTCTGTAAAGGAGGAAATATTTGCCTAA
  • Download Fasta

  • Fasta :-

    MVRVSDNELSDKELVDFLSEDSDNGDENLLNKKYSDKEALITLEVDFPKIVTILGIPKVE SEKHGRLAEVLKKLFIRHLSAKISDSSLLNMKIHMPTDEENKTKGICFVTFNDSFQANEA VKILNKLKLDAKHILTTSKMDDIENIINRDEKAMPINVVGFTREKIRWWLYDEKCREQFI VRYDSHFEVHWFDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDSF EKLIRLQHKSVKEIMFSPNENYVLTWDGTPYSLRNEKSICIWRVITGKLLRSFITPEYSP KEKMFPHFLWSPDDKYIACIGKQKEVYVYELPSMLLIEDQEKKRTPLKYSGVKEFDWSPV DNILAIWIPQTNDTPGTLILVDVPSRKELVSRKIYDVSVASIHWHNKGDYLCLKTTIQKK SGKKIKKEYTQLEIFRMREKNIPVDNVQIEAVKTKQFHWEESNSNRFALILREETTNKQQ IRFYKISNKGTARDAKWSSTFDINNQMNFMKWSPQGTYFILASLASEGTLYFCCLNNNDE VDVIHKDEHLLVNSISWSRCGRFLVSAVSNNPNAFNTGYREENSEAGFHIWTFQGKCLMR IKKPSFIQFLFRPHPKSLFNDKLKLDIKNNLNNYSKKFDNIDEKMKTAKKNALLTERKNV ENSFNQKFQEITALFQSYQEYEQLKKNWETFENQFEWEEKTIVIEHVLSVKEEIFA

  • title: polypeptide substrate binding site
  • coordinates: I53,I56,K63,R66,L67,E69,V70,L71,K73,L74,R77,I123,L124,N125,K126,K128,L129,I134,L135
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_051770061 SPKVESEKHG0.995unspPF3D7_051770061 SPKVESEKHG0.995unspPF3D7_051770061 SPKVESEKHG0.995unspPF3D7_0517700185 SVRYDSHFEV0.993unspPF3D7_0517700250 SLQHKSVKEI0.994unspPF3D7_0517700299 STPEYSPKEK0.997unspPF3D7_0517700358 SEFDWSPVDN0.994unspPF3D7_0517700385 SVDVPSRKEL0.993unspPF3D7_0517700421 SIQKKSGKKI0.995unspPF3D7_0517700709 SEHVLSVKEE0.997unspPF3D7_051770010 SDNELSDKEL0.995unspPF3D7_051770035 SNKKYSDKEA0.996unsp

MAL5P1.177      PFE0885w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India