PF3D7_0527300 | methionine aminopeptidase 1a, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0527300OTHER0.7117440.0153030.272954
No Results

  • Fasta :-

    >PF3D7_0527300 MSFLNKSLMLNFLNTFPKKGKFQHTYILTPKLNKSKLPERKTFKPTLQDGKYKVTASQKV PEHIKCPSYAKTGIVQNSNINYEIKDDKYIEKMKKACKLASECLKLCLENSKEGITTDII DNMAYDFYIKNNAYPAGLNFHSFPKSICASPNEVVCHGIPNLRKLQRGDIITYDCTVFLD GVFGDCAGTVGIGEISERHKKLMDVSKECLYKAISICRDGQLFSEIGRIITEHANKNGFN VIKDFCGHFIGTHMHMYPLIEHHYPNSHNNHRMKKGQIFTIEPILSEGSINIYTWKDKWT VCTNDNSFCSQWEHTILVLDNYAEILT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0527300.fa Sequence name : PF3D7_0527300 Sequence length : 327 VALUES OF COMPUTED PARAMETERS Coef20 : 3.983 CoefTot : -1.697 ChDiff : 8 ZoneTo : 38 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.747 1.241 0.199 0.568 MesoH : -0.691 0.186 -0.333 0.198 MuHd_075 : 21.632 19.805 6.562 5.505 MuHd_095 : 30.254 18.525 8.284 7.139 MuHd_100 : 22.853 16.080 6.804 5.832 MuHd_105 : 25.836 17.565 7.729 6.294 Hmax_075 : 6.800 11.700 -1.916 4.270 Hmax_095 : 13.475 13.125 0.902 5.285 Hmax_100 : 10.500 9.700 0.164 5.000 Hmax_105 : 9.400 9.800 0.604 4.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1174 0.8826 DFMC : 0.3646 0.6354 This protein is probably imported in chloroplast. f(Ser) = 0.0789 f(Arg) = 0.0000 CMi = 1.12782 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 327 PF3D7_0527300 MSFLNKSLMLNFLNTFPKKGKFQHTYILTPKLNKSKLPERKTFKPTLQDGKYKVTASQKVPEHIKCPSYAKTGIVQNSNI 80 NYEIKDDKYIEKMKKACKLASECLKLCLENSKEGITTDIIDNMAYDFYIKNNAYPAGLNFHSFPKSICASPNEVVCHGIP 160 NLRKLQRGDIITYDCTVFLDGVFGDCAGTVGIGEISERHKKLMDVSKECLYKAISICRDGQLFSEIGRIITEHANKNGFN 240 VIKDFCGHFIGTHMHMYPLIEHHYPNSHNNHRMKKGQIFTIEPILSEGSINIYTWKDKWTVCTNDNSFCSQWEHTILVLD 320 NYAEILT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0527300 6 -MSFLNK|SL 0.086 . PF3D7_0527300 18 FLNTFPK|KG 0.064 . PF3D7_0527300 19 LNTFPKK|GK 0.113 . PF3D7_0527300 21 TFPKKGK|FQ 0.082 . PF3D7_0527300 31 TYILTPK|LN 0.063 . PF3D7_0527300 34 LTPKLNK|SK 0.075 . PF3D7_0527300 36 PKLNKSK|LP 0.061 . PF3D7_0527300 40 KSKLPER|KT 0.085 . PF3D7_0527300 41 SKLPERK|TF 0.087 . PF3D7_0527300 44 PERKTFK|PT 0.067 . PF3D7_0527300 51 PTLQDGK|YK 0.058 . PF3D7_0527300 53 LQDGKYK|VT 0.065 . PF3D7_0527300 59 KVTASQK|VP 0.058 . PF3D7_0527300 65 KVPEHIK|CP 0.065 . PF3D7_0527300 71 KCPSYAK|TG 0.059 . PF3D7_0527300 85 NINYEIK|DD 0.089 . PF3D7_0527300 88 YEIKDDK|YI 0.076 . PF3D7_0527300 92 DDKYIEK|MK 0.064 . PF3D7_0527300 94 KYIEKMK|KA 0.069 . PF3D7_0527300 95 YIEKMKK|AC 0.083 . PF3D7_0527300 98 KMKKACK|LA 0.073 . PF3D7_0527300 105 LASECLK|LC 0.059 . PF3D7_0527300 112 LCLENSK|EG 0.055 . PF3D7_0527300 130 AYDFYIK|NN 0.050 . PF3D7_0527300 145 NFHSFPK|SI 0.122 . PF3D7_0527300 163 HGIPNLR|KL 0.077 . PF3D7_0527300 164 GIPNLRK|LQ 0.072 . PF3D7_0527300 167 NLRKLQR|GD 0.103 . PF3D7_0527300 198 IGEISER|HK 0.078 . PF3D7_0527300 200 EISERHK|KL 0.074 . PF3D7_0527300 201 ISERHKK|LM 0.305 . PF3D7_0527300 207 KLMDVSK|EC 0.063 . PF3D7_0527300 212 SKECLYK|AI 0.091 . PF3D7_0527300 218 KAISICR|DG 0.074 . PF3D7_0527300 228 LFSEIGR|II 0.091 . PF3D7_0527300 236 ITEHANK|NG 0.066 . PF3D7_0527300 243 NGFNVIK|DF 0.081 . PF3D7_0527300 272 NSHNNHR|MK 0.140 . PF3D7_0527300 274 HNNHRMK|KG 0.070 . PF3D7_0527300 275 NNHRMKK|GQ 0.317 . PF3D7_0527300 296 INIYTWK|DK 0.078 . PF3D7_0527300 298 IYTWKDK|WT 0.062 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0527300 ATGTCTTTTTTAAATAAAAGTTTGATGTTGAATTTTTTAAATACCTTTCCAAAAAAAGGA AAATTTCAACATACTTATATATTAACACCAAAATTAAATAAATCGAAATTACCTGAACGT AAAACATTTAAACCAACCCTACAAGATGGCAAATATAAGGTAACAGCTAGCCAAAAAGTT CCCGAACATATAAAATGCCCAAGTTATGCTAAAACAGGAATTGTACAAAATTCGAATATT AATTATGAAATTAAGGATGACAAATATATAGAAAAGATGAAAAAAGCTTGTAAACTAGCT TCTGAATGTTTAAAGTTATGTTTAGAAAATTCAAAAGAAGGGATAACAACAGATATTATT GATAATATGGCATATGATTTTTATATAAAAAATAATGCATATCCTGCGGGTCTCAATTTT CATTCTTTTCCAAAAAGTATATGTGCATCTCCAAACGAGGTTGTATGTCATGGTATTCCC AATTTAAGAAAACTACAAAGGGGAGATATTATAACTTATGACTGCACCGTTTTTTTGGAT GGTGTTTTTGGTGACTGTGCAGGAACAGTAGGTATAGGAGAGATTTCCGAAAGACATAAG AAATTAATGGATGTAAGTAAAGAATGTTTATATAAAGCAATATCTATATGTAGAGATGGT CAACTATTTTCTGAAATAGGAAGAATTATAACTGAACATGCAAATAAAAATGGATTTAAT GTAATAAAAGATTTCTGTGGTCATTTCATAGGAACACACATGCATATGTATCCATTAATT GAACACCATTATCCTAATAGTCATAATAATCATCGTATGAAAAAAGGACAAATTTTTACT ATCGAACCAATATTATCAGAAGGTTCTATTAATATTTATACATGGAAAGACAAATGGACT GTATGTACCAATGATAACTCTTTTTGCTCACAATGGGAACATACAATTTTAGTTTTAGAT AATTATGCAGAAATATTAACATAA
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  • Fasta :-

    MSFLNKSLMLNFLNTFPKKGKFQHTYILTPKLNKSKLPERKTFKPTLQDGKYKVTASQKV PEHIKCPSYAKTGIVQNSNINYEIKDDKYIEKMKKACKLASECLKLCLENSKEGITTDII DNMAYDFYIKNNAYPAGLNFHSFPKSICASPNEVVCHGIPNLRKLQRGDIITYDCTVFLD GVFGDCAGTVGIGEISERHKKLMDVSKECLYKAISICRDGQLFSEIGRIITEHANKNGFN VIKDFCGHFIGTHMHMYPLIEHHYPNSHNNHRMKKGQIFTIEPILSEGSINIYTWKDKWT VCTNDNSFCSQWEHTILVLDNYAEILT

  • title: active site
  • coordinates: H157,D174,D185,H248,E282,E313
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MAL5P1.272      PFE1360c      PFE1363c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India