• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008270      

  • Curated_GO_Functions:  zinc ion binding      

  • Curated_GO_Processes:        

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_ID
Prediction
OTHER
SP
mTP
CS_Position
PF3D7_0627300 OTHER 0.999992 0.000001 0.000006
Showing 1 to 1 of 1 rows
No Results
  • Fasta :-

    >PF3D7_0627300 MNGPEEDYDSLYDIMYDYDINDEHFNQHRNLNNININDNVSEKKIHSEQVIPLNNKYEKE KENYNSNIIKKNYEQNEQEHMGNDKNVHSLLSDNLIDQEKKQFNDNKNDLYADKDIINNN IYYMNETNIPKDNIKLEEHNDNSNMEYTINNEQRIHNTYDMTSEKENEKENHDVEDNSKL NTFNKGNNKYSFKYGEIYNDTCTDINISTTYDQGNKEKETDVNGNKNNINITEEKAYEHH DKEEDINANENNNCEQNANVKDNNNNNNNNNNVNKPNTATENESRNTFECNICFDDVRDP VVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSKENVIPLYGRGKNSSDHKYAQPEEPRPT PKRKEGVRRNNTYSNNLGLRASFGVWVNPFSFGLSYTNMSEEPYFYENRNENRSDNRRLQ TETYQAEAASSFFFFLGFFLSLYILFYSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0627300.fa Sequence name : PF3D7_0627300 Sequence length : 449 VALUES OF COMPUTED PARAMETERS Coef20 : 2.306 CoefTot : -0.637 ChDiff : -28 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.488 2.071 0.345 0.873 MesoH : -0.966 -0.241 -0.542 0.086 MuHd_075 : 19.062 12.952 3.989 2.059 MuHd_095 : 38.446 17.656 9.881 5.596 MuHd_100 : 38.917 19.390 9.550 6.074 MuHd_105 : 31.950 18.029 7.441 5.432 Hmax_075 : -6.883 0.583 -4.224 1.190 Hmax_095 : 7.300 4.200 -0.714 3.280 Hmax_100 : 7.300 3.400 -0.714 3.280 Hmax_105 : 1.663 3.850 -1.453 3.080 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9943 0.0057 DFMC : 0.9896 0.0104
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 449 PF3D7_0627300 MNGPEEDYDSLYDIMYDYDINDEHFNQHRNLNNININDNVSEKKIHSEQVIPLNNKYEKEKENYNSNIIKKNYEQNEQEH 80 MGNDKNVHSLLSDNLIDQEKKQFNDNKNDLYADKDIINNNIYYMNETNIPKDNIKLEEHNDNSNMEYTINNEQRIHNTYD 160 MTSEKENEKENHDVEDNSKLNTFNKGNNKYSFKYGEIYNDTCTDINISTTYDQGNKEKETDVNGNKNNINITEEKAYEHH 240 DKEEDINANENNNCEQNANVKDNNNNNNNNNNVNKPNTATENESRNTFECNICFDDVRDPVVTKCGHLFCWLCLSAWIKK 320 NNDCPVCKAEVSKENVIPLYGRGKNSSDHKYAQPEEPRPTPKRKEGVRRNNTYSNNLGLRASFGVWVNPFSFGLSYTNMS 400 EEPYFYENRNENRSDNRRLQTETYQAEAASSFFFFLGFFLSLYILFYSS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0627300 29 EHFNQHR|NL 0.089 . PF3D7_0627300 43 NDNVSEK|KI 0.081 . PF3D7_0627300 44 DNVSEKK|IH 0.094 . PF3D7_0627300 56 VIPLNNK|YE 0.059 . PF3D7_0627300 59 LNNKYEK|EK 0.072 . PF3D7_0627300 61 NKYEKEK|EN 0.067 . PF3D7_0627300 70 YNSNIIK|KN 0.080 . PF3D7_0627300 71 NSNIIKK|NY 0.184 . PF3D7_0627300 85 EHMGNDK|NV 0.079 . PF3D7_0627300 100 NLIDQEK|KQ 0.059 . PF3D7_0627300 101 LIDQEKK|QF 0.092 . PF3D7_0627300 107 KQFNDNK|ND 0.065 . PF3D7_0627300 114 NDLYADK|DI 0.067 . PF3D7_0627300 131 NETNIPK|DN 0.072 . PF3D7_0627300 135 IPKDNIK|LE 0.064 . PF3D7_0627300 154 TINNEQR|IH 0.141 . PF3D7_0627300 165 YDMTSEK|EN 0.074 . PF3D7_0627300 169 SEKENEK|EN 0.073 . PF3D7_0627300 179 DVEDNSK|LN 0.054 . PF3D7_0627300 185 KLNTFNK|GN 0.073 . PF3D7_0627300 189 FNKGNNK|YS 0.069 . PF3D7_0627300 193 NNKYSFK|YG 0.079 . PF3D7_0627300 216 TYDQGNK|EK 0.058 . PF3D7_0627300 218 DQGNKEK|ET 0.073 . PF3D7_0627300 226 TDVNGNK|NN 0.060 . PF3D7_0627300 235 INITEEK|AY 0.071 . PF3D7_0627300 242 AYEHHDK|EE 0.069 . PF3D7_0627300 261 EQNANVK|DN 0.069 . PF3D7_0627300 275 NNNNVNK|PN 0.085 . PF3D7_0627300 285 ATENESR|NT 0.088 . PF3D7_0627300 298 ICFDDVR|DP 0.077 . PF3D7_0627300 304 RDPVVTK|CG 0.057 . PF3D7_0627300 319 CLSAWIK|KN 0.071 . PF3D7_0627300 320 LSAWIKK|NN 0.090 . PF3D7_0627300 328 NDCPVCK|AE 0.066 . PF3D7_0627300 333 CKAEVSK|EN 0.065 . PF3D7_0627300 342 VIPLYGR|GK 0.078 . PF3D7_0627300 344 PLYGRGK|NS 0.067 . PF3D7_0627300 350 KNSSDHK|YA 0.111 . PF3D7_0627300 358 AQPEEPR|PT 0.079 . PF3D7_0627300 362 EPRPTPK|RK 0.079 . PF3D7_0627300 363 PRPTPKR|KE 0.191 . PF3D7_0627300 364 RPTPKRK|EG 0.089 . PF3D7_0627300 368 KRKEGVR|RN 0.084 . PF3D7_0627300 369 RKEGVRR|NN 0.164 . PF3D7_0627300 380 SNNLGLR|AS 0.100 . PF3D7_0627300 409 PYFYENR|NE 0.070 . PF3D7_0627300 413 ENRNENR|SD 0.152 . PF3D7_0627300 417 ENRSDNR|RL 0.088 . PF3D7_0627300 418 NRSDNRR|LQ 0.146 . ____________________________^_________________
  • Fasta :-

    >PF3D7_0627300 ATGAATGGTCCAGAAGAAGATTATGATTCTCTTTATGACATTATGTATGATTATGATATA AACGATGAACATTTTAATCAGCATAGGAATTTAAACAATATTAACATAAATGATAATGTA TCTGAAAAGAAAATTCATTCTGAACAAGTTATCCCTTTAAATAATAAATATGAAAAAGAA AAGGAAAACTATAATAGTAATATAATAAAAAAAAACTATGAGCAAAATGAACAAGAGCAT ATGGGGAACGATAAAAACGTGCATTCATTATTATCAGATAATTTAATTGACCAAGAAAAA AAACAATTTAATGATAATAAGAATGATTTGTATGCCGATAAAGATATTATTAATAATAAT ATATATTATATGAATGAAACAAATATACCGAAAGATAATATTAAATTGGAAGAACATAAT GATAATAGTAATATGGAGTACACAATAAATAACGAACAAAGAATTCATAATACTTATGAT ATGACAAGTGAAAAAGAAAATGAAAAGGAAAATCACGATGTAGAAGATAATTCGAAATTA AATACTTTTAATAAGGGTAATAATAAATATTCTTTTAAATATGGTGAAATATACAATGAT ACATGTACTGATATTAACATTAGTACTACATATGATCAGGGTAATAAAGAAAAGGAAACA GATGTTAATGGAAATAAGAATAATATTAATATAACCGAGGAAAAAGCATATGAACATCAT GACAAGGAGGAAGATATTAATGCAAATGAAAATAATAATTGTGAGCAAAACGCAAATGTT AAAGATAATAATAATAATAATAATAATAATAATAATGTAAATAAGCCCAATACGGCTACA GAAAATGAAAGTAGAAATACCTTTGAATGTAATATATGTTTTGATGATGTGAGAGACCCG GTAGTTACAAAATGTGGTCATTTATTTTGCTGGCTATGCTTGTCAGCATGGATAAAAAAA AATAATGACTGCCCTGTATGTAAAGCTGAAGTATCCAAAGAAAATGTTATTCCCTTATAT GGAAGAGGAAAAAATAGTAGTGATCATAAATATGCACAACCAGAAGAACCTAGACCAACA CCTAAAAGAAAAGAAGGAGTAAGAAGAAATAACACCTATTCTAATAATTTAGGTTTAAGA GCTTCTTTTGGTGTATGGGTAAATCCTTTCTCCTTTGGTTTATCATATACAAACATGTCA GAAGAACCATATTTTTATGAAAATAGAAACGAAAACAGATCAGATAATAGACGATTACAA ACAGAAACATATCAAGCAGAAGCTGCTTCTTCCTTCTTCTTTTTTCTAGGATTCTTCCTA TCCTTATATATTTTGTTTTATTCCTCTTAA
  • Download Fasta
  • Fasta :-

    MNGPEEDYDSLYDIMYDYDINDEHFNQHRNLNNININDNVSEKKIHSEQVIPLNNKYEKE KENYNSNIIKKNYEQNEQEHMGNDKNVHSLLSDNLIDQEKKQFNDNKNDLYADKDIINNN IYYMNETNIPKDNIKLEEHNDNSNMEYTINNEQRIHNTYDMTSEKENEKENHDVEDNSKL NTFNKGNNKYSFKYGEIYNDTCTDINISTTYDQGNKEKETDVNGNKNNINITEEKAYEHH DKEEDINANENNNCEQNANVKDNNNNNNNNNNVNKPNTATENESRNTFECNICFDDVRDP VVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSKENVIPLYGRGKNSSDHKYAQPEEPRPT PKRKEGVRRNNTYSNNLGLRASFGVWVNPFSFGLSYTNMSEEPYFYENRNENRSDNRRLQ TETYQAEAASSFFFFLGFFLSLYILFYSS

  • title: Zn binding site
  • coordinates: C290,C293,C305,H307,C310,C313,C324,C327
No Results
No Results
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ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
ID
Site
Peptide
Score
Method
PF3D7_0627300 41 S NDNVSEKKI 0.991 unsp PF3D7_0627300 41 S NDNVSEKKI 0.991 unsp PF3D7_0627300 41 S NDNVSEKKI 0.991 unsp PF3D7_0627300 163 S YDMTSEKEN 0.998 unsp PF3D7_0627300 360 T EPRPTPKRK 0.994 unsp PF3D7_0627300 8 Y PEEDYDSLY 0.991 unsp PF3D7_0627300 10 S EDYDSLYDI 0.991 unsp
Showing 1 to 1 of 1 rows

2270.t00160      MAL6P1.155      PFF1325c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India