PF3D7_0627500 | protein DJ-1

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0627500OTHER0.9987110.0010960.000192
No Results

  • Fasta :-

    >PF3D7_0627500 MSGKKTALVAVASGSEDVEYITVVDVLRRAGVHVTTASVEKSEQVCLQSKNVVLADTTIS KVRNNIYDVLVIPGGMKGSNTISECSEFIDMLKEQKANNRLYAAICAAPETVLDRHSLID DVEAVAYPSFERNFKHIGKGRVCVSKNCITSVGPGSAVEFGLKIVEHLLGRQVALSLASG FLLHPAVTF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0627500.fa Sequence name : PF3D7_0627500 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.640 CoefTot : 0.155 ChDiff : 0 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.694 1.594 0.164 0.626 MesoH : -0.618 0.386 -0.362 0.196 MuHd_075 : 1.441 3.830 1.343 1.621 MuHd_095 : 21.044 10.220 6.984 3.862 MuHd_100 : 12.646 11.153 4.355 3.199 MuHd_105 : 6.632 11.132 1.056 2.139 Hmax_075 : 1.800 8.283 -0.384 2.840 Hmax_095 : 11.000 10.400 2.177 4.220 Hmax_100 : 4.800 11.200 -0.007 3.500 Hmax_105 : 5.200 11.600 -0.368 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9825 0.0175 DFMC : 0.9574 0.0426
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 PF3D7_0627500 MSGKKTALVAVASGSEDVEYITVVDVLRRAGVHVTTASVEKSEQVCLQSKNVVLADTTISKVRNNIYDVLVIPGGMKGSN 80 TISECSEFIDMLKEQKANNRLYAAICAAPETVLDRHSLIDDVEAVAYPSFERNFKHIGKGRVCVSKNCITSVGPGSAVEF 160 GLKIVEHLLGRQVALSLASGFLLHPAVTF 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0627500 4 ---MSGK|KT 0.062 . PF3D7_0627500 5 --MSGKK|TA 0.091 . PF3D7_0627500 28 TVVDVLR|RA 0.112 . PF3D7_0627500 29 VVDVLRR|AG 0.103 . PF3D7_0627500 41 TTASVEK|SE 0.086 . PF3D7_0627500 50 QVCLQSK|NV 0.067 . PF3D7_0627500 61 ADTTISK|VR 0.055 . PF3D7_0627500 63 TTISKVR|NN 0.087 . PF3D7_0627500 77 VIPGGMK|GS 0.059 . PF3D7_0627500 93 EFIDMLK|EQ 0.054 . PF3D7_0627500 96 DMLKEQK|AN 0.058 . PF3D7_0627500 100 EQKANNR|LY 0.083 . PF3D7_0627500 115 PETVLDR|HS 0.070 . PF3D7_0627500 132 AYPSFER|NF 0.079 . PF3D7_0627500 135 SFERNFK|HI 0.256 . PF3D7_0627500 139 NFKHIGK|GR 0.059 . PF3D7_0627500 141 KHIGKGR|VC 0.082 . PF3D7_0627500 146 GRVCVSK|NC 0.074 . PF3D7_0627500 163 AVEFGLK|IV 0.071 . PF3D7_0627500 171 VEHLLGR|QV 0.109 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0627500 ATGAGTGGAAAAAAAACAGCATTAGTTGCAGTGGCTTCTGGATCTGAAGATGTCGAATAT ATTACTGTTGTTGACGTTTTAAGGAGAGCAGGTGTACATGTAACAACAGCATCTGTTGAA AAGAGTGAGCAAGTCTGCTTACAATCAAAAAATGTCGTGTTAGCTGACACAACTATTAGT AAGGTACGAAATAATATTTATGATGTTTTAGTCATACCAGGAGGTATGAAAGGATCTAAT ACTATATCGGAGTGTTCAGAATTTATTGACATGTTAAAAGAACAAAAAGCTAATAACAGA TTATATGCAGCTATATGTGCTGCCCCCGAAACTGTTTTAGATCGACACTCGTTAATTGAT GATGTAGAAGCTGTGGCTTATCCTTCTTTTGAAAGAAATTTTAAACACATTGGAAAAGGA AGAGTATGTGTTTCTAAAAATTGTATAACTTCTGTAGGACCAGGTTCAGCTGTTGAATTT GGTCTTAAAATTGTTGAACATTTATTAGGAAGGCAAGTAGCACTAAGCCTTGCTTCAGGT TTTCTTTTACATCCAGCAGTTACATTTTAA
  • Download Fasta

  • Fasta :-

    MSGKKTALVAVASGSEDVEYITVVDVLRRAGVHVTTASVEKSEQVCLQSKNVVLADTTIS KVRNNIYDVLVIPGGMKGSNTISECSEFIDMLKEQKANNRLYAAICAAPETVLDRHSLID DVEAVAYPSFERNFKHIGKGRVCVSKNCITSVGPGSAVEFGLKIVEHLLGRQVALSLASG FLLHPAVTF

  • title: conserved cys residue
  • coordinates: C106
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_0627500117 SLDRHSLIDD0.997unsp

2270.t00162      MAL6P1.153      PFF1335c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India