PF3D7_0705800 | cysteine-rich secretory protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_0705800SP0.0178740.9820960.000030CS pos: 22-23. VNG-QF. Pr: 0.9564
No Results

  • Fasta :-

    >PF3D7_0705800 MIGIMNIFLLFFVFISYIYVNGQFCKFNKEFIKERHNDFRLKHKAKPLQWSKKLEEIATY EANLIRDNSDCIVSSKQVDTNYFSFFKNENIEASVDTWYEGINDYDFELGCIKRNDNIFE FTRIIWKSSENLGCATACCKTKGILICKYDNNTNKPGYFADNVGTIDTMYVLDNLNNGIH IMKNDHSDKRTQS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0705800.fa Sequence name : PF3D7_0705800 Sequence length : 193 VALUES OF COMPUTED PARAMETERS Coef20 : 4.529 CoefTot : -1.241 ChDiff : -1 ZoneTo : 29 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.435 0.373 0.913 MesoH : -1.269 -0.139 -0.530 0.069 MuHd_075 : 18.839 18.216 6.028 5.177 MuHd_095 : 15.913 11.905 5.149 4.018 MuHd_100 : 15.686 12.404 4.483 4.225 MuHd_105 : 18.580 15.867 4.892 4.992 Hmax_075 : 18.500 20.212 4.856 6.694 Hmax_095 : 19.700 22.300 4.352 8.260 Hmax_100 : 23.500 26.400 5.165 9.200 Hmax_105 : 23.800 24.762 5.556 8.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9339 0.0661 DFMC : 0.9695 0.0305
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 193 PF3D7_0705800 MIGIMNIFLLFFVFISYIYVNGQFCKFNKEFIKERHNDFRLKHKAKPLQWSKKLEEIATYEANLIRDNSDCIVSSKQVDT 80 NYFSFFKNENIEASVDTWYEGINDYDFELGCIKRNDNIFEFTRIIWKSSENLGCATACCKTKGILICKYDNNTNKPGYFA 160 DNVGTIDTMYVLDNLNNGIHIMKNDHSDKRTQS 240 ................................................................................ 80 ................................................................................ 160 ................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0705800 26 VNGQFCK|FN 0.070 . PF3D7_0705800 29 QFCKFNK|EF 0.073 . PF3D7_0705800 33 FNKEFIK|ER 0.061 . PF3D7_0705800 35 KEFIKER|HN 0.104 . PF3D7_0705800 40 ERHNDFR|LK 0.131 . PF3D7_0705800 42 HNDFRLK|HK 0.069 . PF3D7_0705800 44 DFRLKHK|AK 0.060 . PF3D7_0705800 46 RLKHKAK|PL 0.083 . PF3D7_0705800 52 KPLQWSK|KL 0.065 . PF3D7_0705800 53 PLQWSKK|LE 0.111 . PF3D7_0705800 66 YEANLIR|DN 0.150 . PF3D7_0705800 76 DCIVSSK|QV 0.095 . PF3D7_0705800 87 NYFSFFK|NE 0.056 . PF3D7_0705800 113 FELGCIK|RN 0.056 . PF3D7_0705800 114 ELGCIKR|ND 0.178 . PF3D7_0705800 123 NIFEFTR|II 0.091 . PF3D7_0705800 127 FTRIIWK|SS 0.079 . PF3D7_0705800 140 CATACCK|TK 0.060 . PF3D7_0705800 142 TACCKTK|GI 0.076 . PF3D7_0705800 148 KGILICK|YD 0.059 . PF3D7_0705800 155 YDNNTNK|PG 0.066 . PF3D7_0705800 183 NGIHIMK|ND 0.062 . PF3D7_0705800 189 KNDHSDK|RT 0.066 . PF3D7_0705800 190 NDHSDKR|TQ 0.179 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0705800 ATGATAGGAATCATGAATATTTTTTTACTATTTTTTGTTTTTATTTCTTATATATATGTG AATGGCCAATTTTGTAAATTTAATAAAGAATTTATAAAAGAAAGACATAATGATTTTAGA TTAAAGCATAAAGCCAAACCACTTCAATGGAGTAAGAAACTTGAAGAGATAGCAACATAC GAAGCAAATTTGATAAGGGATAATTCTGATTGTATTGTTAGTTCAAAGCAAGTTGATACA AACTATTTTTCGTTTTTTAAAAATGAAAATATTGAAGCATCTGTTGATACATGGTATGAG GGGATTAATGATTATGACTTTGAGTTAGGGTGTATTAAAAGGAATGATAATATATTTGAA TTTACAAGGATTATATGGAAAAGTTCAGAGAACCTTGGATGTGCTACAGCATGTTGTAAA ACAAAAGGAATTTTAATTTGCAAATATGATAATAATACAAATAAGCCAGGTTATTTTGCT GACAATGTTGGGACTATTGATACAATGTATGTTTTGGATAATTTAAATAATGGAATACAT ATAATGAAAAATGATCATTCAGATAAGAGAACACAGTCATAA
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  • Fasta :-

    MIGIMNIFLLFFVFISYIYVNGQFCKFNKEFIKERHNDFRLKHKAKPLQWSKKLEEIATY EANLIRDNSDCIVSSKQVDTNYFSFFKNENIEASVDTWYEGINDYDFELGCIKRNDNIFE FTRIIWKSSENLGCATACCKTKGILICKYDNNTNKPGYFADNVGTIDTMYVLDNLNNGIH IMKNDHSDKRTQS

No Results
No Results
IDSitePeptideScoreMethod
PF3D7_0705800187 SKNDHSDKRT0.996unsp

MAL7P1.339      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India