PF3D7_0709700 | prodrug activation and resistance esterase

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0709700OTHER0.9993330.0000890.000578
No Results

  • Fasta :-

    >PF3D7_0709700 MKSQGGGKISRKSSTGSSSSRLDGNPKLDSFHNKDGLSLKTYAWTVKNPVGVIIACHGMN SHVRLEYLRHNVEVVNNNKAILKDGDNYYIYKNSWIEEFNKNGYSFYGIDLQSHGQSEGW KGLRTHIRQFDDIVYDFIQYINRIHDMLCLKNKKDNNSSLHDNINNNNNILPFYIMGLSM GGNVVLRTLQILGKSKDNNNKLNIRGCIPLAGMISIDELATKPSYKYFYIPLAKFLGSFF PSLRLTPGLRFNMFPHMNDIMEFDKFKFKKHVTCRLGYELLNAINNLNNDMDYIPENTPI LFAHSKKDSVCFYGGTLKFYNKLKCLKKELYTLDDMDHLLPMEPGNERVLKKIITWLAVH TPKQEEQV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0709700.fa Sequence name : PF3D7_0709700 Sequence length : 368 VALUES OF COMPUTED PARAMETERS Coef20 : 3.849 CoefTot : -0.206 ChDiff : 12 ZoneTo : 22 KR : 5 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.588 0.205 0.685 MesoH : -0.457 0.320 -0.358 0.225 MuHd_075 : 30.001 12.474 7.501 5.071 MuHd_095 : 28.462 14.113 8.757 5.744 MuHd_100 : 28.833 13.502 8.489 6.016 MuHd_105 : 35.361 16.679 9.565 7.967 Hmax_075 : 8.283 2.333 1.104 1.505 Hmax_095 : 7.900 0.900 1.094 2.300 Hmax_100 : 7.900 0.900 1.094 2.300 Hmax_105 : 8.050 1.517 1.090 2.123 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1714 0.8286 DFMC : 0.1316 0.8684 This protein is probably imported in chloroplast. f(Ser) = 0.3636 f(Arg) = 0.0909 CMi = 1.84332 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 368 PF3D7_0709700 MKSQGGGKISRKSSTGSSSSRLDGNPKLDSFHNKDGLSLKTYAWTVKNPVGVIIACHGMNSHVRLEYLRHNVEVVNNNKA 80 ILKDGDNYYIYKNSWIEEFNKNGYSFYGIDLQSHGQSEGWKGLRTHIRQFDDIVYDFIQYINRIHDMLCLKNKKDNNSSL 160 HDNINNNNNILPFYIMGLSMGGNVVLRTLQILGKSKDNNNKLNIRGCIPLAGMISIDELATKPSYKYFYIPLAKFLGSFF 240 PSLRLTPGLRFNMFPHMNDIMEFDKFKFKKHVTCRLGYELLNAINNLNNDMDYIPENTPILFAHSKKDSVCFYGGTLKFY 320 NKLKCLKKELYTLDDMDHLLPMEPGNERVLKKIITWLAVHTPKQEEQV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0709700 2 -----MK|SQ 0.103 . PF3D7_0709700 8 KSQGGGK|IS 0.065 . PF3D7_0709700 11 GGGKISR|KS 0.104 . PF3D7_0709700 12 GGKISRK|SS 0.140 . PF3D7_0709700 21 TGSSSSR|LD 0.098 . PF3D7_0709700 27 RLDGNPK|LD 0.061 . PF3D7_0709700 34 LDSFHNK|DG 0.080 . PF3D7_0709700 40 KDGLSLK|TY 0.062 . PF3D7_0709700 47 TYAWTVK|NP 0.065 . PF3D7_0709700 64 GMNSHVR|LE 0.080 . PF3D7_0709700 69 VRLEYLR|HN 0.079 . PF3D7_0709700 79 EVVNNNK|AI 0.060 . PF3D7_0709700 83 NNKAILK|DG 0.065 . PF3D7_0709700 92 DNYYIYK|NS 0.068 . PF3D7_0709700 101 WIEEFNK|NG 0.056 . PF3D7_0709700 121 GQSEGWK|GL 0.097 . PF3D7_0709700 124 EGWKGLR|TH 0.078 . PF3D7_0709700 128 GLRTHIR|QF 0.207 . PF3D7_0709700 143 FIQYINR|IH 0.069 . PF3D7_0709700 151 HDMLCLK|NK 0.057 . PF3D7_0709700 153 MLCLKNK|KD 0.063 . PF3D7_0709700 154 LCLKNKK|DN 0.108 . PF3D7_0709700 187 GGNVVLR|TL 0.105 . PF3D7_0709700 194 TLQILGK|SK 0.083 . PF3D7_0709700 196 QILGKSK|DN 0.072 . PF3D7_0709700 201 SKDNNNK|LN 0.061 . PF3D7_0709700 205 NNKLNIR|GC 0.088 . PF3D7_0709700 222 IDELATK|PS 0.065 . PF3D7_0709700 226 ATKPSYK|YF 0.070 . PF3D7_0709700 234 FYIPLAK|FL 0.077 . PF3D7_0709700 244 SFFPSLR|LT 0.077 . PF3D7_0709700 250 RLTPGLR|FN 0.070 . PF3D7_0709700 265 DIMEFDK|FK 0.070 . PF3D7_0709700 267 MEFDKFK|FK 0.076 . PF3D7_0709700 269 FDKFKFK|KH 0.062 . PF3D7_0709700 270 DKFKFKK|HV 0.194 . PF3D7_0709700 275 KKHVTCR|LG 0.105 . PF3D7_0709700 306 ILFAHSK|KD 0.071 . PF3D7_0709700 307 LFAHSKK|DS 0.136 . PF3D7_0709700 318 FYGGTLK|FY 0.058 . PF3D7_0709700 322 TLKFYNK|LK 0.057 . PF3D7_0709700 324 KFYNKLK|CL 0.079 . PF3D7_0709700 327 NKLKCLK|KE 0.056 . PF3D7_0709700 328 KLKCLKK|EL 0.101 . PF3D7_0709700 348 MEPGNER|VL 0.083 . PF3D7_0709700 351 GNERVLK|KI 0.213 . PF3D7_0709700 352 NERVLKK|II 0.127 . PF3D7_0709700 363 LAVHTPK|QE 0.078 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0709700 ATGAAGAGCCAGGGTGGAGGGAAGATATCGAGGAAGAGCTCCACAGGTTCGAGCAGTAGT CGATTAGATGGGAATCCCAAATTGGATTCTTTTCATAATAAGGATGGGTTATCTTTAAAA ACTTATGCATGGACGGTTAAAAATCCAGTAGGTGTTATAATAGCATGTCATGGTATGAAT TCTCATGTACGTTTAGAATATTTAAGACATAATGTCGAGGTAGTAAATAATAATAAGGCA ATATTAAAAGATGGTGATAATTATTATATATATAAAAATAGTTGGATTGAGGAGTTTAAT AAAAATGGATATTCATTTTATGGAATAGATTTACAAAGTCATGGACAGTCAGAAGGATGG AAAGGTTTAAGAACCCATATAAGACAATTTGATGATATAGTATATGATTTTATACAATAT ATTAATAGAATACATGATATGTTATGTTTAAAAAATAAAAAAGATAATAATTCATCCCTT CATGATAATATAAATAATAATAATAATATATTACCATTTTATATTATGGGATTATCTATG GGGGGTAATGTTGTTTTAAGAACTTTACAAATATTAGGAAAATCAAAAGATAATAATAAT AAATTAAATATAAGAGGATGTATACCATTAGCTGGTATGATATCTATAGATGAGTTAGCA ACGAAACCATCATATAAATATTTCTATATTCCATTAGCTAAATTCTTAGGAAGCTTTTTT CCAAGTTTACGTCTTACTCCTGGTTTACGTTTTAATATGTTTCCACATATGAATGATATT ATGGAATTTGATAAATTCAAATTTAAAAAACATGTAACATGTAGATTAGGTTATGAGTTA TTAAATGCTATAAATAACCTAAATAATGATATGGATTACATTCCTGAAAATACACCTATA CTTTTTGCTCACTCAAAAAAAGATAGTGTATGCTTTTATGGAGGTACATTAAAATTTTAC AACAAACTTAAGTGTCTTAAAAAAGAATTATATACCTTAGATGACATGGACCACCTTCTA CCTATGGAACCTGGAAATGAAAGAGTTCTAAAAAAAATTATCACATGGCTAGCTGTCCAT ACCCCCAAACAAGAAGAACAAGTATAA
  • Download Fasta

  • Fasta :-

    MKSQGGGKISRKSSTGSSSSRLDGNPKLDSFHNKDGLSLKTYAWTVKNPVGVIIACHGMN SHVRLEYLRHNVEVVNNNKAILKDGDNYYIYKNSWIEEFNKNGYSFYGIDLQSHGQSEGW KGLRTHIRQFDDIVYDFIQYINRIHDMLCLKNKKDNNSSLHDNINNNNNILPFYIMGLSM GGNVVLRTLQILGKSKDNNNKLNIRGCIPLAGMISIDELATKPSYKYFYIPLAKFLGSFF PSLRLTPGLRFNMFPHMNDIMEFDKFKFKKHVTCRLGYELLNAINNLNNDMDYIPENTPI LFAHSKKDSVCFYGGTLKFYNKLKCLKKELYTLDDMDHLLPMEPGNERVLKKIITWLAVH TPKQEEQV

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0709700305 SLFAHSKKDS0.998unspPF3D7_0709700305 SLFAHSKKDS0.998unspPF3D7_0709700305 SLFAHSKKDS0.998unspPF3D7_070970013 SISRKSSTGS0.996unspPF3D7_070970014 SSRKSSTGSS0.996unsp

PF07_0040      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India