PF3D7_0805000 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_0805000OTHER0.9998870.0000700.000043
No Results

  • Fasta :-

    >PF3D7_0805000 MGNVLNRIIFNGPTEGYYEKFDLDFIYIETENNEKVAAHFINRNAPLTILFCHGNGENVY MLYDYFYETSKIWNVNVFLYDYLGYGESTGTASEKNMYLSGNAVYDYMVNTLKINPNSIV LYGKSIGSCAAVDIAIKRKVKGLILQSAILSLLNICFKTRFIFPFDSFCNIKRIKLIPCF VFFIHGTDDKIVPFYHGMCLYEKCKFKVHPYWVVDGKHNDIELIENERFNENVKSFLNFL YNSDL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0805000.fa Sequence name : PF3D7_0805000 Sequence length : 245 VALUES OF COMPUTED PARAMETERS Coef20 : 3.045 CoefTot : -0.898 ChDiff : -2 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.653 0.117 0.518 MesoH : -0.242 0.900 -0.201 0.297 MuHd_075 : 23.754 20.459 7.005 5.580 MuHd_095 : 35.612 23.120 9.974 8.053 MuHd_100 : 27.021 18.773 7.853 6.661 MuHd_105 : 15.679 12.886 4.872 4.879 Hmax_075 : 14.817 15.517 2.652 5.845 Hmax_095 : 17.000 18.100 3.742 6.600 Hmax_100 : 15.400 13.500 3.181 5.980 Hmax_105 : 6.200 10.400 0.603 4.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8933 0.1067 DFMC : 0.9374 0.0626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 245 PF3D7_0805000 MGNVLNRIIFNGPTEGYYEKFDLDFIYIETENNEKVAAHFINRNAPLTILFCHGNGENVYMLYDYFYETSKIWNVNVFLY 80 DYLGYGESTGTASEKNMYLSGNAVYDYMVNTLKINPNSIVLYGKSIGSCAAVDIAIKRKVKGLILQSAILSLLNICFKTR 160 FIFPFDSFCNIKRIKLIPCFVFFIHGTDDKIVPFYHGMCLYEKCKFKVHPYWVVDGKHNDIELIENERFNENVKSFLNFL 240 YNSDL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0805000 7 MGNVLNR|II 0.127 . PF3D7_0805000 20 TEGYYEK|FD 0.065 . PF3D7_0805000 35 ETENNEK|VA 0.056 . PF3D7_0805000 43 AAHFINR|NA 0.080 . PF3D7_0805000 71 YFYETSK|IW 0.058 . PF3D7_0805000 95 TGTASEK|NM 0.068 . PF3D7_0805000 113 YMVNTLK|IN 0.057 . PF3D7_0805000 124 SIVLYGK|SI 0.090 . PF3D7_0805000 137 AVDIAIK|RK 0.054 . PF3D7_0805000 138 VDIAIKR|KV 0.226 . PF3D7_0805000 139 DIAIKRK|VK 0.102 . PF3D7_0805000 141 AIKRKVK|GL 0.132 . PF3D7_0805000 158 LLNICFK|TR 0.062 . PF3D7_0805000 160 NICFKTR|FI 0.110 . PF3D7_0805000 172 DSFCNIK|RI 0.059 . PF3D7_0805000 173 SFCNIKR|IK 0.118 . PF3D7_0805000 175 CNIKRIK|LI 0.060 . PF3D7_0805000 190 IHGTDDK|IV 0.067 . PF3D7_0805000 203 GMCLYEK|CK 0.064 . PF3D7_0805000 205 CLYEKCK|FK 0.063 . PF3D7_0805000 207 YEKCKFK|VH 0.059 . PF3D7_0805000 217 YWVVDGK|HN 0.073 . PF3D7_0805000 228 ELIENER|FN 0.083 . PF3D7_0805000 234 RFNENVK|SF 0.070 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0805000 ATGGGAAATGTTTTGAATAGAATCATTTTTAATGGTCCTACGGAAGGATATTATGAAAAA TTTGATTTAGATTTTATATATATTGAAACAGAGAATAATGAAAAGGTTGCAGCTCATTTT ATTAATAGAAATGCACCTTTGACCATTCTGTTTTGTCATGGGAATGGCGAAAACGTGTAC ATGTTGTATGACTATTTTTATGAGACATCAAAAATATGGAATGTTAATGTGTTTTTATAT GACTATCTAGGATATGGAGAAAGCACAGGGACAGCCTCAGAAAAGAATATGTACTTAAGT GGAAATGCAGTTTATGATTATATGGTAAATACATTAAAAATAAACCCAAACAGTATTGTT TTATATGGAAAATCTATAGGCTCGTGTGCAGCTGTTGATATTGCTATAAAAAGAAAAGTC AAAGGCTTAATACTACAAAGTGCAATATTATCCTTATTAAATATATGCTTTAAGACAAGA TTCATATTTCCTTTTGATTCCTTTTGTAATATTAAAAGGATTAAACTGATTCCTTGTTTT GTATTTTTTATTCATGGAACGGATGATAAAATTGTTCCCTTTTATCATGGAATGTGCCTT TACGAAAAGTGCAAATTCAAAGTACATCCTTATTGGGTTGTCGATGGAAAACATAACGAT ATTGAATTAATTGAAAATGAAAGATTCAATGAAAATGTAAAATCTTTTTTAAATTTTTTG TATAATTCAGATTTATAG
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  • Fasta :-

    MGNVLNRIIFNGPTEGYYEKFDLDFIYIETENNEKVAAHFINRNAPLTILFCHGNGENVY MLYDYFYETSKIWNVNVFLYDYLGYGESTGTASEKNMYLSGNAVYDYMVNTLKINPNSIV LYGKSIGSCAAVDIAIKRKVKGLILQSAILSLLNICFKTRFIFPFDSFCNIKRIKLIPCF VFFIHGTDDKIVPFYHGMCLYEKCKFKVHPYWVVDGKHNDIELIENERFNENVKSFLNFL YNSDL

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MAL8P1.138      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India