PF3D7_0812220 | GTP-binding protein YihA3

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0812220OTHER0.6927410.3038560.003404
No Results

  • Fasta :-

    >PF3D7_0812220 MPNKGKRSYFLYIFYLTFCINLMFIYGFIQKKIYIKSFPNHKYPLYKNNNNDNNKEDLEY KLYKNISFNKIKTNLKNLLVVNKNINISDIKYFSCIGKFHDYEKIENFGVNEICILGRSN VGKSTFLRNFIRYLLKINENKDIKVSKNSGCTRSINLYSFENEKRKRLFIITDMPGLGYA EGIGKKKMDYLRKNLDDYIFLRNQICLFFILIDMSVDVQRIDLSLVDMIKRTNVPFRVIC TKSDKYDSNLEGRLNAIKNFYNLDKIPIPISKFSKTNYINIFKEIQYHCNLDK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0812220.fa Sequence name : PF3D7_0812220 Sequence length : 293 VALUES OF COMPUTED PARAMETERS Coef20 : 4.009 CoefTot : -3.634 ChDiff : 22 ZoneTo : 51 KR : 8 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.012 2.000 0.359 0.806 MesoH : -1.401 0.276 -0.522 0.121 MuHd_075 : 40.213 28.032 12.769 9.449 MuHd_095 : 27.516 15.331 7.890 5.444 MuHd_100 : 21.952 16.784 6.395 5.394 MuHd_105 : 19.092 17.054 6.651 4.979 Hmax_075 : 20.883 19.367 3.621 7.770 Hmax_095 : 1.700 2.300 -2.661 2.600 Hmax_100 : -1.600 1.100 -3.735 1.940 Hmax_105 : -4.900 2.450 4.744 1.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1470 0.8530 DFMC : 0.2474 0.7526 This protein is probably imported in mitochondria. f(Ser) = 0.0392 f(Arg) = 0.0196 CMi = 0.40241 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 293 PF3D7_0812220 MPNKGKRSYFLYIFYLTFCINLMFIYGFIQKKIYIKSFPNHKYPLYKNNNNDNNKEDLEYKLYKNISFNKIKTNLKNLLV 80 VNKNINISDIKYFSCIGKFHDYEKIENFGVNEICILGRSNVGKSTFLRNFIRYLLKINENKDIKVSKNSGCTRSINLYSF 160 ENEKRKRLFIITDMPGLGYAEGIGKKKMDYLRKNLDDYIFLRNQICLFFILIDMSVDVQRIDLSLVDMIKRTNVPFRVIC 240 TKSDKYDSNLEGRLNAIKNFYNLDKIPIPISKFSKTNYINIFKEIQYHCNLDK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0812220 4 ---MPNK|GK 0.063 . PF3D7_0812220 6 -MPNKGK|RS 0.056 . PF3D7_0812220 7 MPNKGKR|SY 0.391 . PF3D7_0812220 31 IYGFIQK|KI 0.058 . PF3D7_0812220 32 YGFIQKK|IY 0.111 . PF3D7_0812220 36 QKKIYIK|SF 0.069 . PF3D7_0812220 42 KSFPNHK|YP 0.057 . PF3D7_0812220 47 HKYPLYK|NN 0.067 . PF3D7_0812220 55 NNNDNNK|ED 0.058 . PF3D7_0812220 61 KEDLEYK|LY 0.057 . PF3D7_0812220 64 LEYKLYK|NI 0.068 . PF3D7_0812220 70 KNISFNK|IK 0.060 . PF3D7_0812220 72 ISFNKIK|TN 0.069 . PF3D7_0812220 76 KIKTNLK|NL 0.058 . PF3D7_0812220 83 NLLVVNK|NI 0.063 . PF3D7_0812220 91 INISDIK|YF 0.075 . PF3D7_0812220 98 YFSCIGK|FH 0.071 . PF3D7_0812220 104 KFHDYEK|IE 0.063 . PF3D7_0812220 118 EICILGR|SN 0.104 . PF3D7_0812220 123 GRSNVGK|ST 0.127 . PF3D7_0812220 128 GKSTFLR|NF 0.107 . PF3D7_0812220 132 FLRNFIR|YL 0.110 . PF3D7_0812220 136 FIRYLLK|IN 0.062 . PF3D7_0812220 141 LKINENK|DI 0.081 . PF3D7_0812220 144 NENKDIK|VS 0.061 . PF3D7_0812220 147 KDIKVSK|NS 0.074 . PF3D7_0812220 153 KNSGCTR|SI 0.145 . PF3D7_0812220 164 YSFENEK|RK 0.054 . PF3D7_0812220 165 SFENEKR|KR 0.136 . PF3D7_0812220 166 FENEKRK|RL 0.108 . PF3D7_0812220 167 ENEKRKR|LF 0.139 . PF3D7_0812220 185 YAEGIGK|KK 0.061 . PF3D7_0812220 186 AEGIGKK|KM 0.082 . PF3D7_0812220 187 EGIGKKK|MD 0.077 . PF3D7_0812220 192 KKMDYLR|KN 0.075 . PF3D7_0812220 193 KMDYLRK|NL 0.094 . PF3D7_0812220 202 DDYIFLR|NQ 0.079 . PF3D7_0812220 220 MSVDVQR|ID 0.088 . PF3D7_0812220 230 SLVDMIK|RT 0.060 . PF3D7_0812220 231 LVDMIKR|TN 0.112 . PF3D7_0812220 237 RTNVPFR|VI 0.135 . PF3D7_0812220 242 FRVICTK|SD 0.071 . PF3D7_0812220 245 ICTKSDK|YD 0.069 . PF3D7_0812220 253 DSNLEGR|LN 0.082 . PF3D7_0812220 258 GRLNAIK|NF 0.059 . PF3D7_0812220 265 NFYNLDK|IP 0.062 . PF3D7_0812220 272 IPIPISK|FS 0.068 . PF3D7_0812220 275 PISKFSK|TN 0.074 . PF3D7_0812220 283 NYINIFK|EI 0.057 . PF3D7_0812220 293 YHCNLDK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0812220 ATGCCAAATAAAGGAAAAAGGTCTTATTTTTTATATATATTTTATCTGACCTTCTGTATT AATTTGATGTTTATTTATGGTTTCATACAAAAGAAAATTTATATTAAATCGTTTCCTAAT CATAAATATCCATTATATAAAAATAATAATAATGATAATAACAAAGAGGACTTGGAATAT AAACTTTACAAAAATATCAGCTTTAATAAAATAAAAACAAACCTAAAAAATTTATTAGTT GTAAACAAAAATATTAATATATCAGACATTAAGTATTTTTCCTGTATAGGCAAATTTCAT GATTATGAAAAGATTGAAAATTTTGGAGTAAATGAAATTTGCATATTAGGAAGAAGTAAT GTTGGAAAGTCTACATTTCTTCGAAATTTTATAAGATATTTATTAAAAATAAATGAAAAT AAAGATATTAAAGTTTCTAAGAATAGTGGATGTACAAGATCTATAAATCTATATTCATTT GAAAATGAAAAAAGAAAACGATTATTTATTATAACTGATATGCCAGGTTTAGGATATGCT GAAGGGATAGGAAAAAAGAAAATGGATTATTTAAGGAAAAATTTGGATGATTATATCTTT TTAAGAAATCAAATTTGTTTGTTCTTTATTTTAATTGATATGAGTGTAGATGTACAGAGA ATAGATTTATCTCTAGTGGATATGATAAAAAGAACCAATGTGCCCTTTCGTGTTATATGT ACAAAGAGTGACAAATATGATTCAAATTTAGAGGGAAGACTGAATGCAATCAAAAATTTT TATAACCTTGATAAAATTCCAATACCTATTTCTAAATTTTCCAAAACAAACTATATAAAT ATATTCAAGGAAATTCAATATCACTGTAATTTAGACAAATAA
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  • Fasta :-

    MPNKGKRSYFLYIFYLTFCINLMFIYGFIQKKIYIKSFPNHKYPLYKNNNNDNNKEDLEY KLYKNISFNKIKTNLKNLLVVNKNINISDIKYFSCIGKFHDYEKIENFGVNEICILGRSN VGKSTFLRNFIRYLLKINENKDIKVSKNSGCTRSINLYSFENEKRKRLFIITDMPGLGYA EGIGKKKMDYLRKNLDDYIFLRNQICLFFILIDMSVDVQRIDLSLVDMIKRTNVPFRVIC TKSDKYDSNLEGRLNAIKNFYNLDKIPIPISKFSKTNYINIFKEIQYHCNLDK

  • title: GTP/Mg2+ binding site
  • coordinates: S119,N120,V121,G122,K123,S124,T125,G176,T241,K242,D244,S274,K275,T276
No Results
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MAL8P1.98      MAL8P1.99      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India