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Computed_GO_Function_IDs: GO:0008233
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Computed_GO_Process_IDs: GO:0006465
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Curated_GO_Component_IDs: GO:0044310
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PF3D7_0904400
MDSFLNRLNVLFYSMALCFLILCAFNYGTSFYLFDEKEIKTNIQVKSIKRFVYNRYINAD
EAVLSLDVSYDMRKAFNWNLKQLFVYVLVTYETPKKIKNEVIIQDYIVKNKKQAKKNYRN
FITKYSLKDYYNGLRNNLIHLQVCYKYMPIVGFSRSFEGAKISYQLPPEYFDNLPSNYPL
YYPDK
- Download Fasta
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MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0904400.fa
Sequence name : PF3D7_0904400
Sequence length : 185
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.680
CoefTot : 0.246
ChDiff : 10
ZoneTo : 34
KR : 1
DE : 1
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.982 2.247 0.438 0.721
MesoH : -0.950 0.322 -0.457 0.169
MuHd_075 : 22.540 12.232 5.024 4.064
MuHd_095 : 25.509 16.467 5.224 6.006
MuHd_100 : 25.625 18.353 6.837 5.707
MuHd_105 : 23.856 19.476 7.198 4.758
Hmax_075 : 14.900 23.917 3.401 7.160
Hmax_095 : 21.700 19.700 2.930 7.140
Hmax_100 : 22.900 21.700 4.469 7.540
Hmax_105 : 5.600 11.800 1.332 3.000
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9008 0.0992
DFMC : 0.8353 0.1647
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
185 PF3D7_0904400
MDSFLNRLNVLFYSMALCFLILCAFNYGTSFYLFDEKEIKTNIQVKSIKRFVYNRYINADEAVLSLDVSYDMRKAFNWNL 80
KQLFVYVLVTYETPKKIKNEVIIQDYIVKNKKQAKKNYRNFITKYSLKDYYNGLRNNLIHLQVCYKYMPIVGFSRSFEGA 160
KISYQLPPEYFDNLPSNYPLYYPDK 240
................................................................................ 80
................................................................................ 160
......................... 240
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PF3D7_0904400 7 MDSFLNR|LN 0.083 .
PF3D7_0904400 37 FYLFDEK|EI 0.058 .
PF3D7_0904400 40 FDEKEIK|TN 0.064 .
PF3D7_0904400 46 KTNIQVK|SI 0.092 .
PF3D7_0904400 49 IQVKSIK|RF 0.058 .
PF3D7_0904400 50 QVKSIKR|FV 0.185 .
PF3D7_0904400 55 KRFVYNR|YI 0.146 .
PF3D7_0904400 73 DVSYDMR|KA 0.092 .
PF3D7_0904400 74 VSYDMRK|AF 0.090 .
PF3D7_0904400 81 AFNWNLK|QL 0.070 .
PF3D7_0904400 95 VTYETPK|KI 0.063 .
PF3D7_0904400 96 TYETPKK|IK 0.095 .
PF3D7_0904400 98 ETPKKIK|NE 0.062 .
PF3D7_0904400 109 IQDYIVK|NK 0.060 .
PF3D7_0904400 111 DYIVKNK|KQ 0.058 .
PF3D7_0904400 112 YIVKNKK|QA 0.117 .
PF3D7_0904400 115 KNKKQAK|KN 0.079 .
PF3D7_0904400 116 NKKQAKK|NY 0.096 .
PF3D7_0904400 119 QAKKNYR|NF 0.093 .
PF3D7_0904400 124 YRNFITK|YS 0.071 .
PF3D7_0904400 128 ITKYSLK|DY 0.079 .
PF3D7_0904400 135 DYYNGLR|NN 0.072 .
PF3D7_0904400 146 HLQVCYK|YM 0.072 .
PF3D7_0904400 155 PIVGFSR|SF 0.136 .
PF3D7_0904400 161 RSFEGAK|IS 0.067 .
PF3D7_0904400 185 PLYYPDK|-- 0.067 .
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Fasta :-
>PF3D7_0904400
ATGGATAGCTTCTTAAACCGCTTAAATGTGTTGTTTTATTCTATGGCCCTGTGTTTTTTA
ATATTGTGTGCGTTCAATTATGGAACATCTTTTTATTTATTTGATGAGAAAGAAATAAAA
ACCAATATTCAGGTGAAAAGTATTAAAAGATTTGTATATAATAGGTACATAAATGCTGAT
GAAGCAGTATTATCTTTAGATGTTTCTTATGATATGAGAAAAGCATTTAATTGGAATTTA
AAACAGCTTTTTGTTTATGTTTTAGTTACATATGAAACGCCTAAAAAAATAAAGAATGAA
GTTATAATTCAAGATTATATTGTTAAAAATAAAAAGCAAGCCAAAAAAAATTATAGAAAT
TTTATTACAAAATATTCACTTAAAGATTATTATAACGGACTAAGAAATAATTTAATTCAT
TTACAAGTTTGTTATAAATATATGCCTATTGTGGGTTTTTCAAGATCTTTTGAAGGTGCC
AAAATTTCTTATCAATTGCCCCCTGAATATTTTGATAACTTGCCTTCGAATTACCCCTTA
TATTATCCAGACAAATAA
- Download Fasta
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| ID | Site | Peptide | Score | Method |
| PF3D7_0904400 | 126 S | ITKYSLKDY | 0.993 | unsp |