PF3D7_0913500 | protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  plastid organization      

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0913500SP0.0956720.9037070.000622CS pos: 18-19. ANC-YN. Pr: 0.8627
No Results

  • Fasta :-

    >PF3D7_0913500 MIIKFFFFSILFLLYANCYNTIKKIRIVKNYVKIINKNKSDWCIRKYKKIYNYNKIKVNL SSEYNSVNNKTNEQNNISKHIKELYIKNYIKIKNSFIHIKNILKNIKENLFQVTLKKQII ISVAFFFLHFYLLSEHFLILFPYQLIPNHSNILMSLDINNTLFLLTTLYFLKDIKTNFQT FRNKLKLNRFVLELQENKRKNILSISVLLIASYILSGYASIYTEKVLSILKLANITFNEN IIKSLQILAGHFIWVFCSYLTFRNLLYPYFKNNKSNLNFRYTDRWCFKVIYGYLFSHFIF NIVDIFNNFILNYFTSDDIYSDNSIDEIVHEKEFFSTFLCIISPCFSAPFFEEFIYRFFV LKSLNLFMNINYAVTFSSLFFAIHHLNIFNLIPLFFLSFFWSYIYIYTDNILVTMLIHSF WNIYVFLTSLYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0913500.fa Sequence name : PF3D7_0913500 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 4.532 CoefTot : -2.261 ChDiff : 22 ZoneTo : 62 KR : 14 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.100 1.982 0.426 0.803 MesoH : 1.058 1.200 -0.040 0.560 MuHd_075 : 22.724 18.936 8.490 4.691 MuHd_095 : 44.802 26.950 13.496 9.877 MuHd_100 : 41.456 24.182 11.049 10.230 MuHd_105 : 49.821 31.547 15.555 11.014 Hmax_075 : 0.933 18.667 2.560 2.613 Hmax_095 : 5.075 12.075 0.816 4.253 Hmax_100 : 8.300 12.000 0.869 5.590 Hmax_105 : 18.317 24.733 4.984 7.408 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0073 0.9927 DFMC : 0.0131 0.9869 This protein is probably imported in mitochondria. f(Ser) = 0.0645 f(Arg) = 0.0323 CMi = 0.56022 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 PF3D7_0913500 MIIKFFFFSILFLLYANCYNTIKKIRIVKNYVKIINKNKSDWCIRKYKKIYNYNKIKVNLSSEYNSVNNKTNEQNNISKH 80 IKELYIKNYIKIKNSFIHIKNILKNIKENLFQVTLKKQIIISVAFFFLHFYLLSEHFLILFPYQLIPNHSNILMSLDINN 160 TLFLLTTLYFLKDIKTNFQTFRNKLKLNRFVLELQENKRKNILSISVLLIASYILSGYASIYTEKVLSILKLANITFNEN 240 IIKSLQILAGHFIWVFCSYLTFRNLLYPYFKNNKSNLNFRYTDRWCFKVIYGYLFSHFIFNIVDIFNNFILNYFTSDDIY 320 SDNSIDEIVHEKEFFSTFLCIISPCFSAPFFEEFIYRFFVLKSLNLFMNINYAVTFSSLFFAIHHLNIFNLIPLFFLSFF 400 WSYIYIYTDNILVTMLIHSFWNIYVFLTSLYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0913500 4 ---MIIK|FF 0.063 . PF3D7_0913500 23 NCYNTIK|KI 0.066 . PF3D7_0913500 24 CYNTIKK|IR 0.083 . PF3D7_0913500 26 NTIKKIR|IV 0.137 . PF3D7_0913500 29 KKIRIVK|NY 0.121 . PF3D7_0913500 33 IVKNYVK|II 0.064 . PF3D7_0913500 37 YVKIINK|NK 0.056 . PF3D7_0913500 39 KIINKNK|SD 0.087 . PF3D7_0913500 45 KSDWCIR|KY 0.084 . PF3D7_0913500 46 SDWCIRK|YK 0.087 . PF3D7_0913500 48 WCIRKYK|KI 0.152 . PF3D7_0913500 49 CIRKYKK|IY 0.085 . PF3D7_0913500 55 KIYNYNK|IK 0.055 . PF3D7_0913500 57 YNYNKIK|VN 0.066 . PF3D7_0913500 70 YNSVNNK|TN 0.076 . PF3D7_0913500 79 EQNNISK|HI 0.063 . PF3D7_0913500 82 NISKHIK|EL 0.079 . PF3D7_0913500 87 IKELYIK|NY 0.066 . PF3D7_0913500 91 YIKNYIK|IK 0.061 . PF3D7_0913500 93 KNYIKIK|NS 0.073 . PF3D7_0913500 100 NSFIHIK|NI 0.073 . PF3D7_0913500 104 HIKNILK|NI 0.064 . PF3D7_0913500 107 NILKNIK|EN 0.056 . PF3D7_0913500 116 LFQVTLK|KQ 0.063 . PF3D7_0913500 117 FQVTLKK|QI 0.103 . PF3D7_0913500 172 TTLYFLK|DI 0.077 . PF3D7_0913500 175 YFLKDIK|TN 0.058 . PF3D7_0913500 182 TNFQTFR|NK 0.089 . PF3D7_0913500 184 FQTFRNK|LK 0.054 . PF3D7_0913500 186 TFRNKLK|LN 0.073 . PF3D7_0913500 189 NKLKLNR|FV 0.113 . PF3D7_0913500 198 LELQENK|RK 0.051 . PF3D7_0913500 199 ELQENKR|KN 0.132 . PF3D7_0913500 200 LQENKRK|NI 0.076 . PF3D7_0913500 225 ASIYTEK|VL 0.062 . PF3D7_0913500 231 KVLSILK|LA 0.054 . PF3D7_0913500 243 FNENIIK|SL 0.080 . PF3D7_0913500 263 CSYLTFR|NL 0.069 . PF3D7_0913500 271 LLYPYFK|NN 0.061 . PF3D7_0913500 274 PYFKNNK|SN 0.066 . PF3D7_0913500 280 KSNLNFR|YT 0.129 . PF3D7_0913500 284 NFRYTDR|WC 0.106 . PF3D7_0913500 288 TDRWCFK|VI 0.085 . PF3D7_0913500 332 DEIVHEK|EF 0.061 . PF3D7_0913500 357 FEEFIYR|FF 0.075 . PF3D7_0913500 362 YRFFVLK|SL 0.080 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0913500 ATGATTATAAAATTTTTTTTTTTTAGTATCCTTTTCTTGTTATACGCAAATTGTTATAAT ACTATAAAGAAAATAAGAATTGTCAAAAATTATGTTAAAATAATTAATAAAAATAAATCA GATTGGTGTATTAGAAAATATAAAAAAATCTACAATTATAACAAAATTAAGGTGAATTTA TCTAGTGAATATAATTCTGTAAATAATAAAACGAATGAACAAAATAATATTAGTAAACAC ATTAAAGAATTGTATATAAAAAATTATATAAAGATTAAAAATAGTTTTATACATATAAAA AACATTTTAAAGAATATAAAAGAAAATTTATTTCAAGTAACATTAAAAAAACAAATCATT ATATCTGTAGCTTTTTTCTTTTTACATTTTTATTTACTCTCTGAACATTTTTTAATTTTA TTTCCATATCAACTAATACCTAATCATTCAAATATTTTAATGAGCTTAGATATAAACAAT ACACTTTTTCTTTTAACCACACTTTATTTTTTAAAAGACATAAAAACAAACTTTCAAACA TTTAGAAATAAATTAAAATTAAATAGATTTGTACTAGAGCTACAGGAAAACAAGAGAAAA AATATTTTGTCTATATCGGTCTTATTAATTGCTTCATACATTTTATCAGGATATGCCTCA ATATATACGGAAAAAGTGTTAAGCATCTTAAAGCTGGCGAATATTACCTTTAATGAAAAT ATTATAAAATCACTACAGATTTTGGCAGGGCATTTTATTTGGGTATTTTGTAGTTATCTT ACTTTTCGCAATTTATTATACCCTTATTTTAAGAATAACAAGAGCAATTTAAATTTTCGA TATACAGACAGATGGTGTTTTAAAGTGATATATGGATATTTATTTTCCCACTTTATATTT AATATAGTAGATATCTTTAATAATTTCATTTTAAATTATTTTACAAGTGATGATATATAT TCTGATAACAGCATAGATGAAATTGTACATGAGAAAGAATTTTTTTCGACATTTCTATGT ATTATAAGTCCATGTTTCAGTGCTCCATTTTTTGAAGAATTTATTTATCGATTTTTTGTT CTTAAAAGTTTAAATTTATTTATGAATATTAATTATGCTGTTACTTTCTCATCGTTATTT TTTGCTATACATCATCTTAATATATTTAATTTAATACCCTTATTTTTTTTATCTTTTTTT TGGTCATATATATATATATATACAGATAATATTCTTGTCACAATGTTAATACATTCCTTT TGGAATATTTATGTTTTTTTAACGTCACTGTACAATTAA
  • Download Fasta

  • Fasta :-

    MIIKFFFFSILFLLYANCYNTIKKIRIVKNYVKIINKNKSDWCIRKYKKIYNYNKIKVNL SSEYNSVNNKTNEQNNISKHIKELYIKNYIKIKNSFIHIKNILKNIKENLFQVTLKKQII ISVAFFFLHFYLLSEHFLILFPYQLIPNHSNILMSLDINNTLFLLTTLYFLKDIKTNFQT FRNKLKLNRFVLELQENKRKNILSISVLLIASYILSGYASIYTEKVLSILKLANITFNEN IIKSLQILAGHFIWVFCSYLTFRNLLYPYFKNNKSNLNFRYTDRWCFKVIYGYLFSHFIF NIVDIFNNFILNYFTSDDIYSDNSIDEIVHEKEFFSTFLCIISPCFSAPFFEEFIYRFFV LKSLNLFMNINYAVTFSSLFFAIHHLNIFNLIPLFFLSFFWSYIYIYTDNILVTMLIHSF WNIYVFLTSLYN

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0913500320 YSDDIYSDNS0.991unspPF3D7_0913500324 SYSDNSIDEI0.992unsp

PFI0660c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India