PF3D7_0919200 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_0919200OTHER0.9908230.0082520.000925
No Results

  • Fasta :-

    >PF3D7_0919200 MNIFLHTYTLDVPFFLKNVRHTGIEVFGNEYTFSMDGIITCKPKKSSIGQYCKSYELSDV KLTYIQFTEILNVLGKIYRPNTYNFIYKNCNHFCDDLFELLSGKRLFHRFMLYSRIGKLF GKFRNVALCGYINSMEITRDDKILYIYALNLSKSLLQKNEQLKNSNEVIYLKDINYECYK NYNEHASSFYVVPYQSYAHNYCNTQKIHYNDNVLNNAIKCLSDEIKNNLPKPEPLTSVYS FSTSGTYSFG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0919200.fa Sequence name : PF3D7_0919200 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 4.075 CoefTot : -1.256 ChDiff : 6 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.165 0.841 0.027 0.424 MesoH : -0.911 0.099 -0.490 0.136 MuHd_075 : 25.442 16.926 7.084 5.249 MuHd_095 : 19.122 17.862 7.723 5.138 MuHd_100 : 21.994 20.271 8.641 6.064 MuHd_105 : 25.790 18.793 8.038 6.012 Hmax_075 : 20.500 17.000 0.364 6.850 Hmax_095 : 17.500 20.300 3.156 7.060 Hmax_100 : 17.500 20.300 3.156 7.060 Hmax_105 : 8.800 10.500 -0.035 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7347 0.2653 DFMC : 0.7061 0.2939
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 PF3D7_0919200 MNIFLHTYTLDVPFFLKNVRHTGIEVFGNEYTFSMDGIITCKPKKSSIGQYCKSYELSDVKLTYIQFTEILNVLGKIYRP 80 NTYNFIYKNCNHFCDDLFELLSGKRLFHRFMLYSRIGKLFGKFRNVALCGYINSMEITRDDKILYIYALNLSKSLLQKNE 160 QLKNSNEVIYLKDINYECYKNYNEHASSFYVVPYQSYAHNYCNTQKIHYNDNVLNNAIKCLSDEIKNNLPKPEPLTSVYS 240 FSTSGTYSFG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0919200 17 DVPFFLK|NV 0.068 . PF3D7_0919200 20 FFLKNVR|HT 0.098 . PF3D7_0919200 42 DGIITCK|PK 0.062 . PF3D7_0919200 44 IITCKPK|KS 0.076 . PF3D7_0919200 45 ITCKPKK|SS 0.190 . PF3D7_0919200 53 SIGQYCK|SY 0.078 . PF3D7_0919200 61 YELSDVK|LT 0.059 . PF3D7_0919200 76 ILNVLGK|IY 0.069 . PF3D7_0919200 79 VLGKIYR|PN 0.083 . PF3D7_0919200 88 TYNFIYK|NC 0.070 . PF3D7_0919200 104 FELLSGK|RL 0.057 . PF3D7_0919200 105 ELLSGKR|LF 0.092 . PF3D7_0919200 109 GKRLFHR|FM 0.106 . PF3D7_0919200 115 RFMLYSR|IG 0.066 . PF3D7_0919200 118 LYSRIGK|LF 0.169 . PF3D7_0919200 122 IGKLFGK|FR 0.071 . PF3D7_0919200 124 KLFGKFR|NV 0.118 . PF3D7_0919200 139 NSMEITR|DD 0.082 . PF3D7_0919200 142 EITRDDK|IL 0.088 . PF3D7_0919200 153 YALNLSK|SL 0.072 . PF3D7_0919200 158 SKSLLQK|NE 0.064 . PF3D7_0919200 163 QKNEQLK|NS 0.068 . PF3D7_0919200 172 NEVIYLK|DI 0.061 . PF3D7_0919200 180 INYECYK|NY 0.062 . PF3D7_0919200 206 NYCNTQK|IH 0.058 . PF3D7_0919200 219 VLNNAIK|CL 0.082 . PF3D7_0919200 226 CLSDEIK|NN 0.068 . PF3D7_0919200 231 IKNNLPK|PE 0.058 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0919200 ATGAATATCTTTTTACATACATATACCCTAGACGTTCCTTTTTTTTTGAAAAATGTTCGT CACACAGGCATTGAAGTTTTTGGTAATGAATATACCTTCTCAATGGATGGTATAATAACA TGCAAACCCAAAAAATCTAGTATAGGTCAATATTGCAAAAGTTATGAATTATCAGATGTA AAATTAACCTATATACAGTTTACTGAGATATTAAATGTACTTGGTAAAATATACAGACCT AACACATATAATTTTATATACAAAAATTGTAATCATTTTTGTGATGATTTATTTGAGTTA TTAAGTGGGAAAAGATTATTTCATAGATTCATGTTATATTCAAGAATAGGAAAATTATTT GGTAAATTTCGAAATGTTGCTTTATGTGGTTATATTAACTCCATGGAAATAACAAGAGAT GATAAGATTTTATATATATATGCTTTAAATTTATCTAAATCATTATTGCAAAAAAATGAA CAACTTAAAAATAGTAATGAAGTTATATATCTTAAAGATATTAATTATGAATGTTATAAA AATTATAATGAACATGCTTCATCATTTTATGTAGTTCCATATCAAAGTTATGCACATAAC TATTGTAATACACAAAAAATACATTATAATGATAATGTATTAAATAATGCAATTAAATGT TTAAGTGATGAAATAAAAAATAATTTACCAAAACCAGAGCCACTAACTAGCGTTTATTCA TTCAGTACAAGTGGAACTTATTCATTCGGATAA
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  • Fasta :-

    MNIFLHTYTLDVPFFLKNVRHTGIEVFGNEYTFSMDGIITCKPKKSSIGQYCKSYELSDV KLTYIQFTEILNVLGKIYRPNTYNFIYKNCNHFCDDLFELLSGKRLFHRFMLYSRIGKLF GKFRNVALCGYINSMEITRDDKILYIYALNLSKSLLQKNEQLKNSNEVIYLKDINYECYK NYNEHASSFYVVPYQSYAHNYCNTQKIHYNDNVLNNAIKCLSDEIKNNLPKPEPLTSVYS FSTSGTYSFG

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PFI0940c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India