PF3D7_0923100 | OTU domain-containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  protein deubiquitination      

_IDPredictionOTHERSPmTPCS_Position
PF3D7_0923100OTHER0.9998790.0000080.000113
No Results

  • Fasta :-

    >PF3D7_0923100 MCLDWKYNYMKTRLKVLENNEKDEEIERKLQNNLNIKSLGYVLKAIEILKRKEKMKRYST FDRHLSYFKKNNINKPQYNEKKILEHRLWAIGCELIEVIGDGNCLFRSISRNLFHKQKYH MYVRKKCVEYMINYKEEYSIYFENNEFQQYIKNMSKNGYWGDELCIKATADAFDCIIYII TSTLENWHLKYESKNNNGMYKKCVFLAYSSPTHYDCFKLMQR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0923100.fa Sequence name : PF3D7_0923100 Sequence length : 222 VALUES OF COMPUTED PARAMETERS Coef20 : 3.817 CoefTot : -0.524 ChDiff : 12 ZoneTo : 17 KR : 4 DE : 1 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.635 1.565 0.132 0.509 MesoH : -1.211 -0.324 -0.598 0.070 MuHd_075 : 14.090 8.168 4.041 1.153 MuHd_095 : 18.818 12.513 6.225 2.800 MuHd_100 : 20.781 15.944 8.058 2.929 MuHd_105 : 16.599 15.675 7.401 2.619 Hmax_075 : 5.900 8.800 1.316 3.020 Hmax_095 : 0.788 6.212 -0.706 1.969 Hmax_100 : 5.600 7.400 -0.669 2.270 Hmax_105 : 2.217 9.917 -0.798 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9979 0.0021 DFMC : 0.9968 0.0032
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 222 PF3D7_0923100 MCLDWKYNYMKTRLKVLENNEKDEEIERKLQNNLNIKSLGYVLKAIEILKRKEKMKRYSTFDRHLSYFKKNNINKPQYNE 80 KKILEHRLWAIGCELIEVIGDGNCLFRSISRNLFHKQKYHMYVRKKCVEYMINYKEEYSIYFENNEFQQYIKNMSKNGYW 160 GDELCIKATADAFDCIIYIITSTLENWHLKYESKNNNGMYKKCVFLAYSSPTHYDCFKLMQR 240 ................................................................................ 80 ................................................................................ 160 .............................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0923100 6 -MCLDWK|YN 0.062 . PF3D7_0923100 11 WKYNYMK|TR 0.066 . PF3D7_0923100 13 YNYMKTR|LK 0.086 . PF3D7_0923100 15 YMKTRLK|VL 0.065 . PF3D7_0923100 22 VLENNEK|DE 0.068 . PF3D7_0923100 28 KDEEIER|KL 0.077 . PF3D7_0923100 29 DEEIERK|LQ 0.068 . PF3D7_0923100 37 QNNLNIK|SL 0.114 . PF3D7_0923100 44 SLGYVLK|AI 0.079 . PF3D7_0923100 50 KAIEILK|RK 0.059 . PF3D7_0923100 51 AIEILKR|KE 0.124 . PF3D7_0923100 52 IEILKRK|EK 0.081 . PF3D7_0923100 54 ILKRKEK|MK 0.150 . PF3D7_0923100 56 KRKEKMK|RY 0.091 . PF3D7_0923100 57 RKEKMKR|YS 0.216 . PF3D7_0923100 63 RYSTFDR|HL 0.118 . PF3D7_0923100 69 RHLSYFK|KN 0.060 . PF3D7_0923100 70 HLSYFKK|NN 0.121 . PF3D7_0923100 75 KKNNINK|PQ 0.068 . PF3D7_0923100 81 KPQYNEK|KI 0.070 . PF3D7_0923100 82 PQYNEKK|IL 0.133 . PF3D7_0923100 87 KKILEHR|LW 0.084 . PF3D7_0923100 107 DGNCLFR|SI 0.215 . PF3D7_0923100 111 LFRSISR|NL 0.094 . PF3D7_0923100 116 SRNLFHK|QK 0.078 . PF3D7_0923100 118 NLFHKQK|YH 0.072 . PF3D7_0923100 124 KYHMYVR|KK 0.083 . PF3D7_0923100 125 YHMYVRK|KC 0.083 . PF3D7_0923100 126 HMYVRKK|CV 0.191 . PF3D7_0923100 135 EYMINYK|EE 0.057 . PF3D7_0923100 152 EFQQYIK|NM 0.064 . PF3D7_0923100 156 YIKNMSK|NG 0.059 . PF3D7_0923100 167 GDELCIK|AT 0.079 . PF3D7_0923100 190 LENWHLK|YE 0.094 . PF3D7_0923100 194 HLKYESK|NN 0.063 . PF3D7_0923100 201 NNNGMYK|KC 0.060 . PF3D7_0923100 202 NNGMYKK|CV 0.139 . PF3D7_0923100 218 THYDCFK|LM 0.064 . PF3D7_0923100 222 CFKLMQR|-- 0.077 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0923100 ATGTGTTTGGACTGGAAATATAATTATATGAAGACAAGACTTAAGGTGTTAGAAAATAAT GAAAAGGATGAAGAAATAGAAAGAAAATTACAAAATAATTTGAATATTAAGAGTTTGGGA TATGTATTAAAAGCTATAGAGATATTAAAAAGAAAAGAAAAGATGAAAAGATATAGTACA TTCGATAGACATTTATCTTATTTTAAAAAAAATAATATAAATAAACCACAGTATAATGAA AAAAAGATATTAGAACATAGATTGTGGGCCATTGGATGTGAACTCATTGAAGTTATTGGA GATGGGAATTGTTTATTCCGTTCGATATCTCGTAACTTATTTCATAAACAAAAATATCAT ATGTATGTTAGGAAAAAATGTGTAGAATATATGATAAATTATAAAGAAGAATATTCTATA TACTTTGAAAATAATGAATTTCAACAATATATAAAAAATATGTCGAAAAATGGGTACTGG GGTGATGAATTATGTATAAAGGCAACAGCTGATGCTTTTGATTGTATAATATATATTATA ACATCTACATTAGAAAACTGGCATTTAAAATATGAATCCAAAAATAATAATGGTATGTAT AAAAAATGCGTCTTCCTAGCATATTCCAGCCCAACTCACTATGACTGTTTTAAACTAATG CAAAGGTAG
  • Download Fasta

  • Fasta :-

    MCLDWKYNYMKTRLKVLENNEKDEEIERKLQNNLNIKSLGYVLKAIEILKRKEKMKRYST FDRHLSYFKKNNINKPQYNEKKILEHRLWAIGCELIEVIGDGNCLFRSISRNLFHKQKYH MYVRKKCVEYMINYKEEYSIYFENNEFQQYIKNMSKNGYWGDELCIKATADAFDCIIYII TSTLENWHLKYESKNNNGMYKKCVFLAYSSPTHYDCFKLMQR

No Results
No Results
IDSitePeptideScoreMethod
PF3D7_092310059 SMKRYSTFDR0.996unsp

PFI1135c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India