PF3D7_0936700 | lysophospholipase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_0936700OTHER0.9998680.0001260.000006
No Results

  • Fasta :-

    >PF3D7_0936700 MVANDLWEEPNEAETRVDGTPRLDSFFNKDGLLLRTYSWTVKKAVGIIVLLHGLNAHVRL QFLKQNVEVVSNDEVILKDIDNYYVYKDSWIEKLNENGFSVYGIDLQGHGKSDGWNNLRA NINFFDDLIYDVIQYIEKINEDISLEYKNESNIGESNIDESNMGASYMGASYIGEPYIDL SNMDASYIDLSNVSTSNIDSSNIDSSNIDSSNMGASYIDTSYINNEDNEKPPIYLMGLSL GVNIALRTLEILGKTCDYKKYNIKGCISLAGMISIEKLASTCSYKYRYFIVPFSKLLSSC CPTFRLPQNFNFQKFPYVNDLINYDTYRHDKWITIKFGRQILNSIKNLNNDLKYIPKDIP ILFVHSVDDCACYYNGVINFYEALESDNKEVHTLYDMDHILTMEPGNEEVLQKVINWINN LGNLKENKKYVL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_0936700.fa Sequence name : PF3D7_0936700 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 3.164 CoefTot : 0.007 ChDiff : -21 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.147 1.482 0.183 0.507 MesoH : -0.400 0.459 -0.236 0.207 MuHd_075 : 21.105 14.419 4.936 3.231 MuHd_095 : 26.154 20.540 7.449 6.424 MuHd_100 : 29.247 22.028 8.687 6.252 MuHd_105 : 30.015 18.902 8.579 5.063 Hmax_075 : -6.100 4.100 -3.783 2.770 Hmax_095 : -4.025 6.388 -2.272 2.809 Hmax_100 : 2.800 10.700 -0.294 3.920 Hmax_105 : 12.017 10.617 0.644 5.098 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9724 0.0276 DFMC : 0.9752 0.0248
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 PF3D7_0936700 MVANDLWEEPNEAETRVDGTPRLDSFFNKDGLLLRTYSWTVKKAVGIIVLLHGLNAHVRLQFLKQNVEVVSNDEVILKDI 80 DNYYVYKDSWIEKLNENGFSVYGIDLQGHGKSDGWNNLRANINFFDDLIYDVIQYIEKINEDISLEYKNESNIGESNIDE 160 SNMGASYMGASYIGEPYIDLSNMDASYIDLSNVSTSNIDSSNIDSSNIDSSNMGASYIDTSYINNEDNEKPPIYLMGLSL 240 GVNIALRTLEILGKTCDYKKYNIKGCISLAGMISIEKLASTCSYKYRYFIVPFSKLLSSCCPTFRLPQNFNFQKFPYVND 320 LINYDTYRHDKWITIKFGRQILNSIKNLNNDLKYIPKDIPILFVHSVDDCACYYNGVINFYEALESDNKEVHTLYDMDHI 400 LTMEPGNEEVLQKVINWINNLGNLKENKKYVL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_0936700 16 PNEAETR|VD 0.085 . PF3D7_0936700 22 RVDGTPR|LD 0.082 . PF3D7_0936700 29 LDSFFNK|DG 0.073 . PF3D7_0936700 35 KDGLLLR|TY 0.082 . PF3D7_0936700 42 TYSWTVK|KA 0.076 . PF3D7_0936700 43 YSWTVKK|AV 0.206 . PF3D7_0936700 59 GLNAHVR|LQ 0.099 . PF3D7_0936700 64 VRLQFLK|QN 0.065 . PF3D7_0936700 78 NDEVILK|DI 0.072 . PF3D7_0936700 87 DNYYVYK|DS 0.079 . PF3D7_0936700 93 KDSWIEK|LN 0.079 . PF3D7_0936700 111 DLQGHGK|SD 0.086 . PF3D7_0936700 119 DGWNNLR|AN 0.080 . PF3D7_0936700 138 VIQYIEK|IN 0.062 . PF3D7_0936700 148 DISLEYK|NE 0.067 . PF3D7_0936700 230 NNEDNEK|PP 0.056 . PF3D7_0936700 247 GVNIALR|TL 0.105 . PF3D7_0936700 254 TLEILGK|TC 0.062 . PF3D7_0936700 259 GKTCDYK|KY 0.066 . PF3D7_0936700 260 KTCDYKK|YN 0.107 . PF3D7_0936700 264 YKKYNIK|GC 0.066 . PF3D7_0936700 277 GMISIEK|LA 0.058 . PF3D7_0936700 285 ASTCSYK|YR 0.066 . PF3D7_0936700 287 TCSYKYR|YF 0.144 . PF3D7_0936700 295 FIVPFSK|LL 0.067 . PF3D7_0936700 305 SCCPTFR|LP 0.077 . PF3D7_0936700 314 QNFNFQK|FP 0.065 . PF3D7_0936700 328 INYDTYR|HD 0.089 . PF3D7_0936700 331 DTYRHDK|WI 0.156 . PF3D7_0936700 336 DKWITIK|FG 0.080 . PF3D7_0936700 339 ITIKFGR|QI 0.106 . PF3D7_0936700 346 QILNSIK|NL 0.062 . PF3D7_0936700 353 NLNNDLK|YI 0.077 . PF3D7_0936700 357 DLKYIPK|DI 0.074 . PF3D7_0936700 389 ALESDNK|EV 0.068 . PF3D7_0936700 413 NEEVLQK|VI 0.068 . PF3D7_0936700 425 NNLGNLK|EN 0.055 . PF3D7_0936700 428 GNLKENK|KY 0.059 . PF3D7_0936700 429 NLKENKK|YV 0.116 . ____________________________^_________________

  • Fasta :-

    >PF3D7_0936700 ATGGTTGCAAATGATTTATGGGAAGAACCGAATGAAGCAGAGACTAGGGTTGATGGTACA CCAAGATTAGATTCATTTTTTAATAAGGATGGATTATTATTAAGAACATACTCATGGACT GTTAAGAAGGCTGTGGGTATTATTGTGTTATTACATGGTCTGAATGCTCATGTCAGATTA CAATTTTTAAAACAAAATGTAGAAGTGGTTAGTAATGATGAAGTAATATTAAAAGATATA GATAATTATTATGTATATAAAGATAGTTGGATAGAGAAATTAAATGAGAATGGTTTCTCA GTTTATGGTATAGATTTACAAGGTCATGGAAAATCTGATGGATGGAATAATTTAAGAGCA AATATCAATTTTTTTGATGATTTAATATATGATGTTATTCAATATATTGAGAAAATTAAT GAAGATATATCATTAGAATATAAAAATGAATCAAATATTGGTGAATCAAATATTGATGAA TCAAATATGGGTGCATCATATATGGGTGCATCATATATTGGTGAACCATATATAGATTTA TCAAATATGGATGCATCATATATAGATTTATCAAATGTGAGTACATCAAATATAGATTCA TCAAATATAGATTCATCAAATATAGATTCATCAAATATGGGTGCATCATATATAGATACA TCATATATTAATAATGAAGATAATGAGAAACCACCAATATATTTAATGGGGTTATCATTA GGAGTTAATATTGCTTTAAGAACCTTAGAAATATTAGGAAAAACATGTGATTATAAAAAA TATAATATAAAAGGATGTATATCCTTAGCAGGGATGATTTCTATAGAGAAATTAGCATCT ACTTGTTCATATAAATATAGATATTTTATTGTACCCTTTTCGAAATTATTATCTTCTTGC TGTCCTACATTTAGATTACCACAAAATTTTAATTTTCAGAAATTTCCATATGTAAATGAT CTTATTAATTATGATACTTATAGACATGATAAATGGATAACGATTAAATTTGGTCGACAA ATTTTAAATTCTATAAAAAATTTAAATAATGACTTGAAATATATACCAAAAGATATTCCT ATACTCTTTGTACATTCGGTAGATGATTGTGCTTGCTATTATAACGGTGTAATTAATTTC TATGAAGCTTTAGAATCAGATAATAAAGAAGTTCATACTTTATATGACATGGACCATATT TTAACTATGGAACCTGGGAATGAAGAAGTATTACAGAAAGTAATTAATTGGATAAATAAT TTAGGTAATTTAAAAGAAAATAAGAAATATGTACTTTAA
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  • Fasta :-

    MVANDLWEEPNEAETRVDGTPRLDSFFNKDGLLLRTYSWTVKKAVGIIVLLHGLNAHVRL QFLKQNVEVVSNDEVILKDIDNYYVYKDSWIEKLNENGFSVYGIDLQGHGKSDGWNNLRA NINFFDDLIYDVIQYIEKINEDISLEYKNESNIGESNIDESNMGASYMGASYIGEPYIDL SNMDASYIDLSNVSTSNIDSSNIDSSNIDSSNMGASYIDTSYINNEDNEKPPIYLMGLSL GVNIALRTLEILGKTCDYKKYNIKGCISLAGMISIEKLASTCSYKYRYFIVPFSKLLSSC CPTFRLPQNFNFQKFPYVNDLINYDTYRHDKWITIKFGRQILNSIKNLNNDLKYIPKDIP ILFVHSVDDCACYYNGVINFYEALESDNKEVHTLYDMDHILTMEPGNEEVLQKVINWINN LGNLKENKKYVL

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_0936700201 SNIDSSNIDS0.993unspPF3D7_0936700201 SNIDSSNIDS0.993unspPF3D7_0936700201 SNIDSSNIDS0.993unspPF3D7_0936700206 SNIDSSNIDS0.993unspPF3D7_0936700216 SNMGASYIDT0.994unspPF3D7_0936700186 SNMDASYIDL0.991unspPF3D7_0936700196 SNVSTSNIDS0.996unsp

PFI1775w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India