PF3D7_1006900 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_1006900OTHER0.9999670.0000130.000019
No Results

  • Fasta :-

    >PF3D7_1006900 MTKNKKGKNKEVINNYEEEEDYNIIDHDENAEVDVIPEPDFNSNMVYLNIYDLDSVSKVV NTVARSVGAGAFHAGVEVYGYEYSFGYIMDGETGVTKTNARYHPYHVYRETIPMGKTPLT KEEVDLLVEVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGIPEWVMSLQKKVTWVKSN INIAASKLKELNKAAGIPNVINYLKKKYEDSNSSDDYKG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1006900.fa Sequence name : PF3D7_1006900 Sequence length : 219 VALUES OF COMPUTED PARAMETERS Coef20 : 2.554 CoefTot : -1.083 ChDiff : -10 ZoneTo : 10 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.465 0.994 -0.069 0.489 MesoH : -0.826 0.187 -0.455 0.199 MuHd_075 : 15.177 11.156 5.515 4.090 MuHd_095 : 24.307 15.008 6.724 4.314 MuHd_100 : 23.650 13.902 6.436 3.609 MuHd_105 : 16.818 10.518 5.211 2.172 Hmax_075 : -15.487 -3.700 -6.415 -0.481 Hmax_095 : -10.675 -2.012 -5.309 0.289 Hmax_100 : -4.000 1.200 -3.625 1.070 Hmax_105 : -8.633 -0.817 -4.388 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9412 0.0588 DFMC : 0.9372 0.0628
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 219 PF3D7_1006900 MTKNKKGKNKEVINNYEEEEDYNIIDHDENAEVDVIPEPDFNSNMVYLNIYDLDSVSKVVNTVARSVGAGAFHAGVEVYG 80 YEYSFGYIMDGETGVTKTNARYHPYHVYRETIPMGKTPLTKEEVDLLVEVMKLQWIGDTYDILSRNCLNYADYFCNLLDV 160 GGIPEWVMSLQKKVTWVKSNINIAASKLKELNKAAGIPNVINYLKKKYEDSNSSDDYKG 240 ................................................................................ 80 ................................................................................ 160 ........................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1006900 3 ----MTK|NK 0.061 . PF3D7_1006900 5 --MTKNK|KG 0.063 . PF3D7_1006900 6 -MTKNKK|GK 0.093 . PF3D7_1006900 8 TKNKKGK|NK 0.106 . PF3D7_1006900 10 NKKGKNK|EV 0.092 . PF3D7_1006900 58 DLDSVSK|VV 0.072 . PF3D7_1006900 65 VVNTVAR|SV 0.491 . PF3D7_1006900 97 GETGVTK|TN 0.059 . PF3D7_1006900 101 VTKTNAR|YH 0.079 . PF3D7_1006900 109 HPYHVYR|ET 0.170 . PF3D7_1006900 116 ETIPMGK|TP 0.058 . PF3D7_1006900 121 GKTPLTK|EE 0.061 . PF3D7_1006900 132 LLVEVMK|LQ 0.066 . PF3D7_1006900 145 TYDILSR|NC 0.069 . PF3D7_1006900 172 WVMSLQK|KV 0.070 . PF3D7_1006900 173 VMSLQKK|VT 0.119 . PF3D7_1006900 178 KKVTWVK|SN 0.078 . PF3D7_1006900 187 INIAASK|LK 0.059 . PF3D7_1006900 189 IAASKLK|EL 0.073 . PF3D7_1006900 193 KLKELNK|AA 0.073 . PF3D7_1006900 205 NVINYLK|KK 0.056 . PF3D7_1006900 206 VINYLKK|KY 0.130 . PF3D7_1006900 207 INYLKKK|YE 0.105 . PF3D7_1006900 218 NSSDDYK|G- 0.081 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1006900 ATGACGAAAAATAAAAAAGGAAAAAATAAAGAAGTTATAAATAACTATGAAGAAGAAGAA GATTATAATATCATAGATCATGATGAAAATGCCGAAGTAGATGTAATTCCTGAACCCGAT TTTAATTCAAATATGGTTTATTTAAATATATACGATTTAGATTCCGTTTCTAAAGTTGTT AATACTGTCGCTAGATCAGTAGGAGCCGGTGCTTTTCATGCTGGTGTAGAAGTATATGGA TATGAATATTCGTTTGGTTACATAATGGATGGTGAAACAGGCGTAACTAAGACAAATGCT CGTTATCATCCTTATCATGTATACCGAGAAACAATTCCAATGGGTAAAACTCCATTAACA AAAGAAGAAGTTGATCTTCTTGTCGAGGTTATGAAACTACAATGGATAGGAGATACTTAT GATATATTATCAAGGAATTGCCTAAATTACGCCGATTATTTTTGTAATTTATTGGATGTG GGTGGTATACCTGAGTGGGTTATGAGCTTACAAAAAAAAGTGACCTGGGTTAAATCAAAT ATAAATATAGCCGCCAGTAAATTAAAGGAATTAAACAAAGCAGCTGGTATTCCCAATGTC ATTAATTATTTGAAGAAAAAATATGAGGATAGTAATAGTAGTGATGATTATAAAGGGTAA
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  • Fasta :-

    MTKNKKGKNKEVINNYEEEEDYNIIDHDENAEVDVIPEPDFNSNMVYLNIYDLDSVSKVV NTVARSVGAGAFHAGVEVYGYEYSFGYIMDGETGVTKTNARYHPYHVYRETIPMGKTPLT KEEVDLLVEVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGGIPEWVMSLQKKVTWVKSN INIAASKLKELNKAAGIPNVINYLKKKYEDSNSSDDYKG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_100690022 YEEEDYNIID0.991unspPF3D7_1006900213 SEDSNSSDDY0.992unsp

PF10_0069      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India