PF3D7_1111900 | Josephin domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1111900OTHER0.9999700.0000040.000026
No Results

  • Fasta :-

    >PF3D7_1111900 MCYYETHRIPTEKGYVNVYFEKQRRLYCLVHTTNNILQAHVYTFNDFKECEYKIDSLNIL ENEGNENHHQTNNNHSDSTNNEEKNNIESSNTNIFSYIKRGMYSFGNFNISVLYFLMNKH NMELQWVDNKEICQKLKDHKNSAILFNDEQLNDKTLIAFIINIVKLKFFDIYHHRHFYTI RKISDSWFKLDSSLNKPILLPTNKDVNNHLINIVKNNKIQKSDNYIIQVFQKVKDN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1111900.fa Sequence name : PF3D7_1111900 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.260 CoefTot : -0.314 ChDiff : 2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.706 -0.010 0.594 MesoH : -1.394 -0.037 -0.706 0.102 MuHd_075 : 27.072 8.842 6.611 4.645 MuHd_095 : 20.944 5.240 4.958 2.605 MuHd_100 : 13.415 5.988 1.864 1.159 MuHd_105 : 7.796 9.517 2.342 0.785 Hmax_075 : -1.867 2.217 -1.665 3.057 Hmax_095 : 3.587 1.312 -0.442 1.910 Hmax_100 : 0.200 2.200 -2.020 1.910 Hmax_105 : -0.300 6.183 0.038 1.832 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9791 0.0209 DFMC : 0.9649 0.0351
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 PF3D7_1111900 MCYYETHRIPTEKGYVNVYFEKQRRLYCLVHTTNNILQAHVYTFNDFKECEYKIDSLNILENEGNENHHQTNNNHSDSTN 80 NEEKNNIESSNTNIFSYIKRGMYSFGNFNISVLYFLMNKHNMELQWVDNKEICQKLKDHKNSAILFNDEQLNDKTLIAFI 160 INIVKLKFFDIYHHRHFYTIRKISDSWFKLDSSLNKPILLPTNKDVNNHLINIVKNNKIQKSDNYIIQVFQKVKDN 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1111900 8 CYYETHR|IP 0.072 . PF3D7_1111900 13 HRIPTEK|GY 0.076 . PF3D7_1111900 22 VNVYFEK|QR 0.057 . PF3D7_1111900 24 VYFEKQR|RL 0.086 . PF3D7_1111900 25 YFEKQRR|LY 0.119 . PF3D7_1111900 48 YTFNDFK|EC 0.066 . PF3D7_1111900 53 FKECEYK|ID 0.060 . PF3D7_1111900 84 STNNEEK|NN 0.069 . PF3D7_1111900 99 NIFSYIK|RG 0.054 . PF3D7_1111900 100 IFSYIKR|GM 0.197 . PF3D7_1111900 119 LYFLMNK|HN 0.056 . PF3D7_1111900 130 LQWVDNK|EI 0.074 . PF3D7_1111900 135 NKEICQK|LK 0.065 . PF3D7_1111900 137 EICQKLK|DH 0.066 . PF3D7_1111900 140 QKLKDHK|NS 0.061 . PF3D7_1111900 154 DEQLNDK|TL 0.060 . PF3D7_1111900 165 FIINIVK|LK 0.056 . PF3D7_1111900 167 INIVKLK|FF 0.081 . PF3D7_1111900 175 FDIYHHR|HF 0.108 . PF3D7_1111900 181 RHFYTIR|KI 0.116 . PF3D7_1111900 182 HFYTIRK|IS 0.075 . PF3D7_1111900 189 ISDSWFK|LD 0.059 . PF3D7_1111900 196 LDSSLNK|PI 0.060 . PF3D7_1111900 204 ILLPTNK|DV 0.084 . PF3D7_1111900 215 HLINIVK|NN 0.061 . PF3D7_1111900 218 NIVKNNK|IQ 0.053 . PF3D7_1111900 221 KNNKIQK|SD 0.098 . PF3D7_1111900 232 IIQVFQK|VK 0.070 . PF3D7_1111900 234 QVFQKVK|DN 0.074 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1111900 ATGTGCTACTATGAAACACACAGAATACCTACAGAAAAGGGATATGTAAATGTTTACTTT GAAAAACAGAGGAGGCTATATTGCCTAGTTCATACGACAAACAATATATTGCAAGCTCAT GTATATACATTTAATGATTTTAAGGAATGTGAATATAAAATAGATTCCCTTAATATTTTA GAGAATGAAGGAAATGAAAATCATCATCAAACAAATAACAACCATTCAGATAGTACTAAT AATGAGGAAAAAAATAATATAGAAAGTAGTAATACAAATATTTTTTCTTATATTAAAAGA GGTATGTATTCCTTTGGGAATTTTAATATAAGTGTTTTGTATTTTTTAATGAACAAACAT AATATGGAATTACAATGGGTTGATAATAAAGAAATATGTCAAAAGTTAAAAGATCATAAA AACTCTGCCATATTATTTAATGACGAACAGCTGAATGATAAAACATTAATAGCATTCATT ATAAATATTGTAAAATTAAAATTTTTTGACATATACCATCATAGACATTTTTATACCATA CGAAAAATATCAGATTCATGGTTTAAGCTTGATTCATCTCTAAATAAACCTATTTTACTT CCTACTAACAAAGATGTTAATAATCATTTGATAAATATTGTTAAAAATAACAAAATTCAA AAATCTGATAATTATATTATTCAGGTTTTTCAAAAAGTTAAGGATAATTAA
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  • Fasta :-

    MCYYETHRIPTEKGYVNVYFEKQRRLYCLVHTTNNILQAHVYTFNDFKECEYKIDSLNIL ENEGNENHHQTNNNHSDSTNNEEKNNIESSNTNIFSYIKRGMYSFGNFNISVLYFLMNKH NMELQWVDNKEICQKLKDHKNSAILFNDEQLNDKTLIAFIINIVKLKFFDIYHHRHFYTI RKISDSWFKLDSSLNKPILLPTNKDVNNHLINIVKNNKIQKSDNYIIQVFQKVKDN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_1111900184 SIRKISDSWF0.993unsp

PF11_0125      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India