_IDPredictionOTHERSPmTPCS_Position
PF3D7_1116800SP0.0419320.9561220.001945CS pos: 26-27. VLC-AP. Pr: 0.9355
No Results
  • Fasta :-

    >PF3D7_1116800 MTRRYLKYYIFVTLLFFVQVINNVLCAPDNKQEQGKYLNRTINILNAGKNIAKSYGHNKL KPIHILSALAKSDYGSTLFKENNVNAANLKEYIDIALEQTRAGAPLDNKSKIVNSAEVKE TLALAEAAANKYKSPKVDVEHLLSGLSNDELVNEIFNEVYLTDEAIKAILKRKFEKTKKD KDGKTGTLYIEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTG KTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKN KIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFER RFEKILVEPPSVDMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAI DLLNKACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIKEFEEK KEQLKKYYEEYVITGERLKRKKEIEKKLNDLKELTQNYVYSNKEPPIELQNSLKEAQQKY LELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLS KSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFNSKD NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVF KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDADNSGTPEYKRVMED VRLSLIKKCKKVFKPEFVNRIDKIGVFEPLNKKNLHKIVALRFKKLEKRLEEKNIQVSVS EKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKELVDDMDVFVDYNSKAKNLV INLSKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1116800.fa Sequence name : PF3D7_1116800 Sequence length : 906 VALUES OF COMPUTED PARAMETERS Coef20 : 4.720 CoefTot : -0.361 ChDiff : 23 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.506 2.171 0.230 0.702 MesoH : -0.568 0.281 -0.414 0.188 MuHd_075 : 29.920 22.776 7.262 7.457 MuHd_095 : 28.498 17.559 7.666 6.334 MuHd_100 : 23.116 21.864 7.191 5.432 MuHd_105 : 20.906 23.091 7.220 6.017 Hmax_075 : 17.617 26.400 5.748 8.283 Hmax_095 : 15.500 22.900 3.342 7.250 Hmax_100 : 19.300 27.800 5.057 8.500 Hmax_105 : 22.167 28.000 5.173 8.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5652 0.4348 DFMC : 0.8134 0.1866
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 906 PF3D7_1116800 MTRRYLKYYIFVTLLFFVQVINNVLCAPDNKQEQGKYLNRTINILNAGKNIAKSYGHNKLKPIHILSALAKSDYGSTLFK 80 ENNVNAANLKEYIDIALEQTRAGAPLDNKSKIVNSAEVKETLALAEAAANKYKSPKVDVEHLLSGLSNDELVNEIFNEVY 160 LTDEAIKAILKRKFEKTKKDKDGKTGTLYIEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTG 240 KTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEG 320 GTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVDMTVKILRSLKSKYENFYGINITDKALV 400 AAAKISDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIKEFEEK 480 KEQLKKYYEEYVITGERLKRKKEIEKKLNDLKELTQNYVYSNKEPPIELQNSLKEAQQKYLELYKETVAYVEAKTHNAMN 560 VDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPT 640 GVGKTELAKTLAIELFNSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVF 720 KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDADNSGTPEYKRVMEDVRLSLIKKCKKVFKPEFVNR 800 IDKIGVFEPLNKKNLHKIVALRFKKLEKRLEEKNIQVSVSEKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKK 880 ELVDDMDVFVDYNSKAKNLVINLSKT 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1116800 3 ----MTR|RY 0.073 . PF3D7_1116800 4 ---MTRR|YL 0.165 . PF3D7_1116800 7 MTRRYLK|YY 0.135 . PF3D7_1116800 31 LCAPDNK|QE 0.058 . PF3D7_1116800 36 NKQEQGK|YL 0.083 . PF3D7_1116800 40 QGKYLNR|TI 0.082 . PF3D7_1116800 49 NILNAGK|NI 0.060 . PF3D7_1116800 53 AGKNIAK|SY 0.090 . PF3D7_1116800 59 KSYGHNK|LK 0.065 . PF3D7_1116800 61 YGHNKLK|PI 0.070 . PF3D7_1116800 71 ILSALAK|SD 0.104 . PF3D7_1116800 80 YGSTLFK|EN 0.063 . PF3D7_1116800 90 VNAANLK|EY 0.064 . PF3D7_1116800 101 IALEQTR|AG 0.075 . PF3D7_1116800 109 GAPLDNK|SK 0.063 . PF3D7_1116800 111 PLDNKSK|IV 0.080 . PF3D7_1116800 119 VNSAEVK|ET 0.065 . PF3D7_1116800 131 AEAAANK|YK 0.078 . PF3D7_1116800 133 AAANKYK|SP 0.086 . PF3D7_1116800 136 NKYKSPK|VD 0.068 . PF3D7_1116800 167 LTDEAIK|AI 0.058 . PF3D7_1116800 171 AIKAILK|RK 0.053 . PF3D7_1116800 172 IKAILKR|KF 0.241 . PF3D7_1116800 173 KAILKRK|FE 0.089 . PF3D7_1116800 176 LKRKFEK|TK 0.072 . PF3D7_1116800 178 RKFEKTK|KD 0.074 . PF3D7_1116800 179 KFEKTKK|DK 0.160 . PF3D7_1116800 181 EKTKKDK|DG 0.077 . PF3D7_1116800 184 KKDKDGK|TG 0.062 . PF3D7_1116800 200 GSNMNEK|VR 0.073 . PF3D7_1116800 202 NMNEKVR|NG 0.083 . PF3D7_1116800 205 EKVRNGK|LQ 0.162 . PF3D7_1116800 212 LQGIYGR|DE 0.095 . PF3D7_1116800 217 GRDEEIR|AI 0.124 . PF3D7_1116800 225 IIESLLR|YN 0.071 . PF3D7_1116800 228 SLLRYNK|NS 0.084 . PF3D7_1116800 241 GNPGTGK|TT 0.063 . PF3D7_1116800 251 VEGLVYR|IE 0.073 . PF3D7_1116800 254 LVYRIEK|GD 0.146 . PF3D7_1116800 259 EKGDVPK|EL 0.073 . PF3D7_1116800 272 VISLNFR|KF 0.090 . PF3D7_1116800 273 ISLNFRK|FT 0.091 . PF3D7_1116800 281 TSGTSYR|GE 0.105 . PF3D7_1116800 287 RGEFETR|MK 0.090 . PF3D7_1116800 289 EFETRMK|NI 0.068 . PF3D7_1116800 293 RMKNIIK|EL 0.063 . PF3D7_1116800 296 NIIKELK|NK 0.057 . PF3D7_1116800 298 IKELKNK|KN 0.068 . PF3D7_1116800 299 KELKNKK|NK 0.084 . PF3D7_1116800 301 LKNKKNK|II 0.075 . PF3D7_1116800 317 LLLGAGK|AE 0.062 . PF3D7_1116800 329 DAANLLK|PV 0.070 . PF3D7_1116800 334 LKPVLSK|GE 0.066 . PF3D7_1116800 338 LSKGEIK|LI 0.074 . PF3D7_1116800 349 TTIAEYR|KF 0.085 . PF3D7_1116800 350 TIAEYRK|FI 0.107 . PF3D7_1116800 360 SCSAFER|RF 0.130 . PF3D7_1116800 361 CSAFERR|FE 0.160 . PF3D7_1116800 364 FERRFEK|IL 0.106 . PF3D7_1116800 377 SVDMTVK|IL 0.061 . PF3D7_1116800 380 MTVKILR|SL 0.119 . PF3D7_1116800 383 KILRSLK|SK 0.184 . PF3D7_1116800 385 LRSLKSK|YE 0.082 . PF3D7_1116800 397 GINITDK|AL 0.072 . PF3D7_1116800 404 ALVAAAK|IS 0.069 . PF3D7_1116800 408 AAKISDR|FI 0.090 . PF3D7_1116800 411 ISDRFIK|DR 0.127 . PF3D7_1116800 413 DRFIKDR|YL 0.124 . PF3D7_1116800 418 DRYLPDK|AI 0.074 . PF3D7_1116800 425 AIDLLNK|AC 0.064 . PF3D7_1116800 437 QVQLSGK|PR 0.059 . PF3D7_1116800 439 QLSGKPR|II 0.183 . PF3D7_1116800 446 IIDVTER|DI 0.104 . PF3D7_1116800 450 TERDIER|LS 0.079 . PF3D7_1116800 460 EISTLEK|DV 0.104 . PF3D7_1116800 464 LEKDVDK|VS 0.061 . PF3D7_1116800 467 DVDKVSK|KK 0.062 . PF3D7_1116800 468 VDKVSKK|KY 0.111 . PF3D7_1116800 469 DKVSKKK|YN 0.099 . PF3D7_1116800 472 SKKKYNK|LI 0.066 . PF3D7_1116800 475 KYNKLIK|EF 0.077 . PF3D7_1116800 480 IKEFEEK|KE 0.056 . PF3D7_1116800 481 KEFEEKK|EQ 0.076 . PF3D7_1116800 485 EKKEQLK|KY 0.062 . PF3D7_1116800 486 KKEQLKK|YY 0.157 . PF3D7_1116800 497 YVITGER|LK 0.072 . PF3D7_1116800 499 ITGERLK|RK 0.059 . PF3D7_1116800 500 TGERLKR|KK 0.464 . PF3D7_1116800 501 GERLKRK|KE 0.082 . PF3D7_1116800 502 ERLKRKK|EI 0.180 . PF3D7_1116800 506 RKKEIEK|KL 0.064 . PF3D7_1116800 507 KKEIEKK|LN 0.111 . PF3D7_1116800 512 KKLNDLK|EL 0.062 . PF3D7_1116800 523 NYVYSNK|EP 0.059 . PF3D7_1116800 534 ELQNSLK|EA 0.074 . PF3D7_1116800 539 LKEAQQK|YL 0.084 . PF3D7_1116800 545 KYLELYK|ET 0.058 . PF3D7_1116800 554 VAYVEAK|TH 0.070 . PF3D7_1116800 575 VSYIYLR|DS 0.146 . PF3D7_1116800 590 LSFESSK|GA 0.070 . PF3D7_1116800 594 SSKGALK|LY 0.056 . PF3D7_1116800 601 LYNSLSK|SI 0.100 . PF3D7_1116800 611 GNEDIIK|SL 0.095 . PF3D7_1116800 619 LSDAVVK|AA 0.070 . PF3D7_1116800 625 KAATGMK|DP 0.080 . PF3D7_1116800 629 GMKDPEK|PI 0.083 . PF3D7_1116800 644 GPTGVGK|TE 0.060 . PF3D7_1116800 649 GKTELAK|TL 0.067 . PF3D7_1116800 659 IELFNSK|DN 0.061 . PF3D7_1116800 664 SKDNLIR|VN 0.084 . PF3D7_1116800 678 EAHSVSK|IT 0.072 . PF3D7_1116800 700 QLTEAVR|EK 0.072 . PF3D7_1116800 702 TEAVREK|PH 0.088 . PF3D7_1116800 714 LFDELEK|AH 0.059 . PF3D7_1116800 721 AHADVFK|VL 0.083 . PF3D7_1116800 737 YINDNHR|RN 0.083 . PF3D7_1116800 738 INDNHRR|NI 0.184 . PF3D7_1116800 759 LGAELFK|KK 0.055 . PF3D7_1116800 760 GAELFKK|KL 0.088 . PF3D7_1116800 761 AELFKKK|LF 0.115 . PF3D7_1116800 775 SGTPEYK|RV 0.071 . PF3D7_1116800 776 GTPEYKR|VM 0.179 . PF3D7_1116800 782 RVMEDVR|LS 0.070 . PF3D7_1116800 787 VRLSLIK|KC 0.065 . PF3D7_1116800 788 RLSLIKK|CK 0.105 . PF3D7_1116800 790 SLIKKCK|KV 0.105 . PF3D7_1116800 791 LIKKCKK|VF 0.089 . PF3D7_1116800 794 KCKKVFK|PE 0.070 . PF3D7_1116800 800 KPEFVNR|ID 0.115 . PF3D7_1116800 803 FVNRIDK|IG 0.086 . PF3D7_1116800 812 VFEPLNK|KN 0.058 . PF3D7_1116800 813 FEPLNKK|NL 0.081 . PF3D7_1116800 817 NKKNLHK|IV 0.073 . PF3D7_1116800 822 HKIVALR|FK 0.086 . PF3D7_1116800 824 IVALRFK|KL 0.074 . PF3D7_1116800 825 VALRFKK|LE 0.148 . PF3D7_1116800 828 RFKKLEK|RL 0.067 . PF3D7_1116800 829 FKKLEKR|LE 0.154 . PF3D7_1116800 833 EKRLEEK|NI 0.066 . PF3D7_1116800 842 QVSVSEK|AI 0.100 . PF3D7_1116800 859 DPELGAR|PT 0.086 . PF3D7_1116800 872 ESVIMTK|FA 0.073 . PF3D7_1116800 879 FAIMYLK|KE 0.056 . PF3D7_1116800 880 AIMYLKK|EL 0.101 . PF3D7_1116800 895 FVDYNSK|AK 0.056 . PF3D7_1116800 897 DYNSKAK|NL 0.067 . PF3D7_1116800 905 LVINLSK|T- 0.062 . ____________________________^_________________
  • Fasta :-

    >PF3D7_1116800 ATGACAAGAAGATATTTAAAGTATTATATTTTTGTTACTTTATTGTTTTTTGTTCAAGTT ATTAATAATGTATTGTGTGCTCCCGATAATAAGCAAGAGCAAGGAAAATATTTGAATAGA ACAATAAACATTTTAAATGCGGGAAAAAATATAGCCAAAAGTTATGGTCACAATAAATTA AAACCTATACACATTTTAAGTGCCCTAGCAAAGAGTGACTATGGTTCAACTTTATTTAAG GAAAATAATGTTAATGCCGCTAACTTGAAGGAATATATAGATATTGCCTTAGAACAAACA AGAGCGGGAGCGCCATTGGATAATAAAAGCAAAATTGTAAACTCTGCCGAAGTTAAGGAA ACATTAGCTTTAGCTGAAGCTGCTGCCAACAAGTACAAAAGCCCCAAAGTGGATGTTGAA CATTTGTTAAGTGGATTATCAAATGATGAATTAGTAAATGAAATTTTTAATGAAGTTTAT TTAACCGATGAAGCCATTAAAGCAATATTAAAAAGAAAATTTGAAAAAACGAAAAAGGAT AAAGATGGAAAAACCGGAACTTTATACATTGAACAATTTGGTTCCAATATGAATGAAAAA GTAAGAAATGGAAAATTACAAGGTATCTATGGAAGAGATGAAGAAATTAGAGCAATTATT GAATCTTTGTTAAGATATAATAAGAACAGTCCAGTTTTAGTTGGTAATCCTGGTACTGGT AAAACAACAATTGTTGAAGGTTTAGTATACAGAATTGAAAAAGGAGATGTACCAAAAGAA TTACAAGGATATACTGTTATTAGTTTAAATTTTAGAAAATTTACTTCAGGAACATCATAT AGAGGAGAATTCGAAACGAGAATGAAAAATATAATTAAAGAATTAAAAAATAAAAAAAAT AAAATTATCTTATTTGTTGACGAAATTCACTTATTATTAGGAGCTGGTAAAGCCGAAGGA GGTACAGATGCAGCTAATTTATTAAAACCAGTTTTATCTAAAGGTGAAATAAAATTGATT GGTGCAACAACTATAGCTGAATATAGAAAATTTATAGAAAGTTGTTCAGCTTTCGAAAGA AGATTTGAAAAAATTCTTGTAGAACCTCCTTCAGTAGATATGACCGTAAAAATTTTAAGA TCTTTAAAAAGTAAATACGAAAACTTTTATGGTATTAATATAACAGATAAAGCTTTAGTA GCAGCAGCAAAAATATCGGATAGATTTATAAAAGATAGATATTTACCAGATAAAGCTATT GATTTATTAAATAAAGCTTGCTCCTTTTTACAAGTACAATTATCAGGAAAACCTAGAATT ATTGATGTAACAGAAAGAGATATAGAAAGATTGTCATATGAAATAAGTACATTAGAAAAG GATGTAGACAAAGTATCCAAAAAGAAATATAATAAATTGATTAAAGAGTTTGAGGAGAAA AAAGAACAATTAAAGAAATATTATGAAGAATATGTTATTACAGGAGAGAGATTAAAGAGA AAAAAAGAAATTGAAAAGAAATTAAATGATCTTAAAGAATTAACACAAAATTATGTATAT TCAAATAAAGAACCACCTATAGAATTACAAAATAGTTTAAAAGAAGCTCAACAAAAATAT TTAGAATTATATAAAGAAACAGTAGCTTATGTTGAAGCAAAAACACACAATGCAATGAAT GTTGATGCAGTTTATCAAGAACATGTATCATATATATATTTAAGAGATTCTGGTATGCCA CTTGGTTCTTTATCATTTGAATCATCAAAGGGTGCATTAAAATTATATAATAGTTTATCT AAATCCATTATTGGAAATGAAGATATTATAAAATCATTAAGTGATGCTGTTGTGAAAGCA GCTACTGGTATGAAGGATCCAGAAAAACCTATAGGAACCTTTTTATTTTTAGGACCTACA GGTGTGGGTAAAACTGAGTTAGCAAAAACATTAGCTATTGAATTATTTAATTCAAAAGAT AACTTGATTCGTGTTAACATGTCAGAATTTACAGAAGCTCACTCTGTCTCCAAAATTACT GGTAGTCCACCAGGTTATGTTGGTTTCAGTGACTCTGGTCAGTTAACCGAAGCAGTCCGA GAAAAACCTCACTCCGTTGTACTTTTTGATGAATTAGAAAAAGCACATGCCGATGTCTTT AAAGTATTATTACAAATTTTAGGAGATGGTTATATTAATGATAATCATAGACGAAATATT GATTTTTCAAATACCATTATTATTATGACATCTAACTTGGGAGCAGAATTATTTAAAAAG AAACTTTTCTTTGATGCCGACAATTCAGGTACTCCAGAATACAAAAGAGTTATGGAAGAT GTCAGATTATCTCTTATAAAGAAATGTAAGAAAGTATTCAAACCAGAATTCGTTAACAGA ATTGATAAAATTGGTGTATTTGAACCATTGAATAAAAAGAACCTACATAAAATCGTTGCA TTAAGATTTAAAAAATTAGAAAAGAGATTGGAAGAAAAAAATATTCAAGTATCTGTTTCT GAAAAGGCTATTGATTATATTATAGATCAATCATATGATCCAGAATTAGGAGCAAGACCT ACCTTAATATTTATTGAAAGTGTTATTATGACCAAATTTGCTATTATGTATTTGAAGAAA GAATTAGTAGATGATATGGATGTATTTGTTGATTATAATAGTAAAGCTAAAAACTTGGTT ATAAACTTATCTAAGACCTAA
  • Download Fasta
  • Fasta :-

    MTRRYLKYYIFVTLLFFVQVINNVLCAPDNKQEQGKYLNRTINILNAGKNIAKSYGHNKL KPIHILSALAKSDYGSTLFKENNVNAANLKEYIDIALEQTRAGAPLDNKSKIVNSAEVKE TLALAEAAANKYKSPKVDVEHLLSGLSNDELVNEIFNEVYLTDEAIKAILKRKFEKTKKD KDGKTGTLYIEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTG KTTIVEGLVYRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKN KIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFER RFEKILVEPPSVDMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAI DLLNKACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIKEFEEK KEQLKKYYEEYVITGERLKRKKEIEKKLNDLKELTQNYVYSNKEPPIELQNSLKEAQQKY LELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLS KSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFNSKD NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVF KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDADNSGTPEYKRVMED VRLSLIKKCKKVFKPEFVNRIDKIGVFEPLNKKNLHKIVALRFKKLEKRLEEKNIQVSVS EKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKELVDDMDVFVDYNSKAKNLV INLSKT

    No Results
  • title: ATP binding site
  • coordinates: N236,P237,G238,T239,G240,K241,T242,T243,D307,T344
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1116800452 SIERLSYEIS0.995unspPF3D7_1116800452 SIERLSYEIS0.995unspPF3D7_1116800452 SIERLSYEIS0.995unspPF3D7_1116800532 SELQNSLKEA0.995unspPF3D7_1116800840 SQVSVSEKAI0.996unspPF3D7_1116800134 SNKYKSPKVD0.997unspPF3D7_1116800279 STSGTSYRGE0.992unsp

PF11_0175      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India