PF3D7_1143000 | alpha/beta hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1143000SP0.0974500.9016570.000893CS pos: 19-20. NLS-ER. Pr: 0.4872
No Results

  • Fasta :-

    >PF3D7_1143000 MPILFYIFYIFCFPLINLSERTSKINYHNNYRFVSSEDKSMMNNFFIKLNKIKNFPNYNT LWKIKKCGYFFLSYKNGKNNWNRISVNTITSSNNNEKITDDVLDGISFSIRDNTHIFKNE TKDIPIVLLHGCYGSRKNFIFFSKLLKSNKVITMDLRNHGDSKHTENMRFDEIENDIKNV LKKLHIKECCLIGFSLGGKASMYCALKNSSLFSHLIIMDILPFNYNCNKNPIKLPFNISQ VTSILYHIKHEKKPRNKLEFLQYLKCELPDISNSFAQFLCMSLKENNDKNQLTWKINIDA IYKDLPFIMNFPLNSQEYKYLNPCNFIIAKKSDLVCSIPNFDKIIKDYFPSASQIILENS THTVYIDEAQQCADIINGMLNK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1143000.fa Sequence name : PF3D7_1143000 Sequence length : 382 VALUES OF COMPUTED PARAMETERS Coef20 : 4.040 CoefTot : -1.171 ChDiff : 14 ZoneTo : 36 KR : 3 DE : 1 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.871 2.035 0.349 0.822 MesoH : -0.422 0.369 -0.361 0.223 MuHd_075 : 19.895 10.044 3.927 3.324 MuHd_095 : 37.258 19.974 9.488 6.739 MuHd_100 : 33.799 19.543 10.231 5.377 MuHd_105 : 31.968 20.074 10.718 5.321 Hmax_075 : 3.267 -0.200 1.806 0.500 Hmax_095 : 1.662 20.912 -2.210 2.109 Hmax_100 : 17.900 20.700 1.289 1.910 Hmax_105 : 12.700 15.900 4.248 4.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8080 0.1920 DFMC : 0.8064 0.1936
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 382 PF3D7_1143000 MPILFYIFYIFCFPLINLSERTSKINYHNNYRFVSSEDKSMMNNFFIKLNKIKNFPNYNTLWKIKKCGYFFLSYKNGKNN 80 WNRISVNTITSSNNNEKITDDVLDGISFSIRDNTHIFKNETKDIPIVLLHGCYGSRKNFIFFSKLLKSNKVITMDLRNHG 160 DSKHTENMRFDEIENDIKNVLKKLHIKECCLIGFSLGGKASMYCALKNSSLFSHLIIMDILPFNYNCNKNPIKLPFNISQ 240 VTSILYHIKHEKKPRNKLEFLQYLKCELPDISNSFAQFLCMSLKENNDKNQLTWKINIDAIYKDLPFIMNFPLNSQEYKY 320 LNPCNFIIAKKSDLVCSIPNFDKIIKDYFPSASQIILENSTHTVYIDEAQQCADIINGMLNK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1143000 21 LINLSER|TS 0.094 . PF3D7_1143000 24 LSERTSK|IN 0.126 . PF3D7_1143000 32 NYHNNYR|FV 0.156 . PF3D7_1143000 39 FVSSEDK|SM 0.078 . PF3D7_1143000 48 MNNFFIK|LN 0.068 . PF3D7_1143000 51 FFIKLNK|IK 0.054 . PF3D7_1143000 53 IKLNKIK|NF 0.063 . PF3D7_1143000 63 NYNTLWK|IK 0.063 . PF3D7_1143000 65 NTLWKIK|KC 0.067 . PF3D7_1143000 66 TLWKIKK|CG 0.091 . PF3D7_1143000 75 YFFLSYK|NG 0.054 . PF3D7_1143000 78 LSYKNGK|NN 0.063 . PF3D7_1143000 83 GKNNWNR|IS 0.108 . PF3D7_1143000 97 SSNNNEK|IT 0.111 . PF3D7_1143000 111 GISFSIR|DN 0.184 . PF3D7_1143000 118 DNTHIFK|NE 0.060 . PF3D7_1143000 122 IFKNETK|DI 0.084 . PF3D7_1143000 136 HGCYGSR|KN 0.079 . PF3D7_1143000 137 GCYGSRK|NF 0.069 . PF3D7_1143000 144 NFIFFSK|LL 0.058 . PF3D7_1143000 147 FFSKLLK|SN 0.084 . PF3D7_1143000 150 KLLKSNK|VI 0.065 . PF3D7_1143000 157 VITMDLR|NH 0.103 . PF3D7_1143000 163 RNHGDSK|HT 0.083 . PF3D7_1143000 169 KHTENMR|FD 0.096 . PF3D7_1143000 178 EIENDIK|NV 0.072 . PF3D7_1143000 182 DIKNVLK|KL 0.073 . PF3D7_1143000 183 IKNVLKK|LH 0.110 . PF3D7_1143000 187 LKKLHIK|EC 0.069 . PF3D7_1143000 199 GFSLGGK|AS 0.060 . PF3D7_1143000 207 SMYCALK|NS 0.057 . PF3D7_1143000 229 FNYNCNK|NP 0.059 . PF3D7_1143000 233 CNKNPIK|LP 0.060 . PF3D7_1143000 249 SILYHIK|HE 0.061 . PF3D7_1143000 252 YHIKHEK|KP 0.064 . PF3D7_1143000 253 HIKHEKK|PR 0.103 . PF3D7_1143000 255 KHEKKPR|NK 0.099 . PF3D7_1143000 257 EKKPRNK|LE 0.056 . PF3D7_1143000 265 EFLQYLK|CE 0.050 . PF3D7_1143000 284 FLCMSLK|EN 0.065 . PF3D7_1143000 289 LKENNDK|NQ 0.059 . PF3D7_1143000 295 KNQLTWK|IN 0.069 . PF3D7_1143000 303 NIDAIYK|DL 0.062 . PF3D7_1143000 319 LNSQEYK|YL 0.094 . PF3D7_1143000 330 CNFIIAK|KS 0.062 . PF3D7_1143000 331 NFIIAKK|SD 0.084 . PF3D7_1143000 343 SIPNFDK|II 0.073 . PF3D7_1143000 346 NFDKIIK|DY 0.073 . PF3D7_1143000 382 INGMLNK|-- 0.067 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1143000 ATGCCTATTTTATTTTATATTTTTTATATTTTCTGTTTTCCCCTTATAAATCTTTCAGAA AGAACGTCAAAAATAAATTATCATAATAATTATCGGTTCGTATCTAGTGAGGATAAAAGC ATGATGAATAATTTTTTTATAAAATTAAATAAAATTAAAAACTTTCCAAATTATAATACT CTTTGGAAAATTAAAAAGTGTGGATATTTTTTCTTATCTTATAAAAATGGGAAAAACAAC TGGAATAGAATTTCTGTTAATACTATAACAAGTAGTAATAATAATGAGAAAATAACTGAT GATGTGTTAGATGGAATTTCATTTAGTATCCGAGATAATACACATATATTCAAAAACGAG ACCAAGGATATTCCTATTGTATTATTGCATGGATGTTATGGAAGTCGAAAAAATTTTATA TTTTTTAGTAAACTATTAAAATCAAATAAAGTGATAACAATGGATTTAAGAAATCATGGA GATTCTAAGCATACCGAAAATATGCGATTTGATGAAATTGAAAATGATATAAAGAATGTT TTAAAAAAATTACATATAAAAGAATGTTGTTTAATTGGGTTTAGTTTAGGAGGAAAAGCA TCGATGTATTGTGCTTTAAAAAATAGTTCGCTTTTTTCTCATTTAATTATTATGGATATA TTACCATTTAATTATAATTGTAATAAAAATCCTATAAAGTTACCTTTTAATATATCTCAA GTTACTAGTATATTATATCATATAAAACATGAAAAGAAACCAAGAAATAAATTGGAATTC TTACAATATTTAAAATGTGAATTACCAGATATTTCAAATTCATTTGCTCAATTTTTATGT ATGTCGCTTAAAGAAAATAATGATAAAAATCAATTAACATGGAAAATTAATATTGACGCA ATTTATAAAGATTTACCCTTTATAATGAATTTCCCATTAAATTCACAAGAATATAAATAT CTTAATCCATGTAATTTTATTATAGCCAAAAAATCAGATCTAGTTTGTTCCATTCCAAAT TTTGATAAAATTATAAAAGACTACTTTCCTTCAGCTAGCCAAATCATTTTAGAGAATTCC ACTCATACGGTTTATATAGACGAAGCGCAACAATGTGCTGATATAATTAATGGAATGTTG AATAAATGA
  • Download Fasta

  • Fasta :-

    MPILFYIFYIFCFPLINLSERTSKINYHNNYRFVSSEDKSMMNNFFIKLNKIKNFPNYNT LWKIKKCGYFFLSYKNGKNNWNRISVNTITSSNNNEKITDDVLDGISFSIRDNTHIFKNE TKDIPIVLLHGCYGSRKNFIFFSKLLKSNKVITMDLRNHGDSKHTENMRFDEIENDIKNV LKKLHIKECCLIGFSLGGKASMYCALKNSSLFSHLIIMDILPFNYNCNKNPIKLPFNISQ VTSILYHIKHEKKPRNKLEFLQYLKCELPDISNSFAQFLCMSLKENNDKNQLTWKINIDA IYKDLPFIMNFPLNSQEYKYLNPCNFIIAKKSDLVCSIPNFDKIIKDYFPSASQIILENS THTVYIDEAQQCADIINGMLNK

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_114300035 SYRFVSSEDK0.996unspPF3D7_1143000109 SGISFSIRDN0.991unsp

PF11_0441a      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India