PF3D7_1217900 | PPPDE peptidase domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PF3D7_1217900OTHER0.9973830.0007270.001890
No Results

  • Fasta :-

    >PF3D7_1217900 MATKFSVKLKIYDLSRGMVKTWSPLLIGKQIDGVWHTAVLVYNMEYFYGGGILCLEQQEF ETFYNIKPVDIIDMGTTELLQTHFHEYLNGIQKNFTVDKYNIVNWNCNNFTNEVCNFLVG KNIPQYILNTPYEVMSTSKGKLILDMMQSYQSSIAPGFDNNQNNATNQQNNQSIQNNIAS QDNTLISNNIASQDNTLISNNISCKTLKLMEEKTSSIDGNMNNIKNMSSNENDIISLKEN YNIHNNENIGKKIDDSCKLPSVSLENFFKDCEIEKLLNDYIKDEKYGVEEKKKFFSFLKT FYDNILENEDLLKNRIIYKKKHPMFFNNIHTMNEYDNILSSLSFCMGFVQNNEATNLQHF TIYIDMKKIKSTTFQQHLHLVINKEIFLKNKDPSIYENHVLYLKDISEYISNDNDKAKNN SQNGLFVFLSHMFLKNNVDMNNTQNDISSFQVLNNIIKAGAQEEKQYILRLNKIINDHIQ SLT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1217900.fa Sequence name : PF3D7_1217900 Sequence length : 483 VALUES OF COMPUTED PARAMETERS Coef20 : 4.246 CoefTot : -0.768 ChDiff : -8 ZoneTo : 31 KR : 6 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.806 1.141 0.091 0.572 MesoH : -0.549 0.190 -0.435 0.262 MuHd_075 : 30.922 14.267 8.315 6.772 MuHd_095 : 37.876 24.346 8.477 7.705 MuHd_100 : 39.531 22.259 9.172 7.968 MuHd_105 : 41.349 20.776 9.865 7.968 Hmax_075 : 17.850 15.633 2.907 6.802 Hmax_095 : 18.000 16.500 0.057 6.100 Hmax_100 : 17.400 16.500 2.080 5.970 Hmax_105 : 16.217 14.583 2.510 5.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0700 0.9300 DFMC : 0.2378 0.7622 This protein is probably imported in mitochondria. f(Ser) = 0.0968 f(Arg) = 0.0323 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 483 PF3D7_1217900 MATKFSVKLKIYDLSRGMVKTWSPLLIGKQIDGVWHTAVLVYNMEYFYGGGILCLEQQEFETFYNIKPVDIIDMGTTELL 80 QTHFHEYLNGIQKNFTVDKYNIVNWNCNNFTNEVCNFLVGKNIPQYILNTPYEVMSTSKGKLILDMMQSYQSSIAPGFDN 160 NQNNATNQQNNQSIQNNIASQDNTLISNNIASQDNTLISNNISCKTLKLMEEKTSSIDGNMNNIKNMSSNENDIISLKEN 240 YNIHNNENIGKKIDDSCKLPSVSLENFFKDCEIEKLLNDYIKDEKYGVEEKKKFFSFLKTFYDNILENEDLLKNRIIYKK 320 KHPMFFNNIHTMNEYDNILSSLSFCMGFVQNNEATNLQHFTIYIDMKKIKSTTFQQHLHLVINKEIFLKNKDPSIYENHV 400 LYLKDISEYISNDNDKAKNNSQNGLFVFLSHMFLKNNVDMNNTQNDISSFQVLNNIIKAGAQEEKQYILRLNKIINDHIQ 480 SLT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1217900 4 ---MATK|FS 0.059 . PF3D7_1217900 8 ATKFSVK|LK 0.059 . PF3D7_1217900 10 KFSVKLK|IY 0.093 . PF3D7_1217900 16 KIYDLSR|GM 0.073 . PF3D7_1217900 20 LSRGMVK|TW 0.074 . PF3D7_1217900 29 SPLLIGK|QI 0.081 . PF3D7_1217900 67 ETFYNIK|PV 0.088 . PF3D7_1217900 93 YLNGIQK|NF 0.059 . PF3D7_1217900 99 KNFTVDK|YN 0.070 . PF3D7_1217900 121 CNFLVGK|NI 0.070 . PF3D7_1217900 139 EVMSTSK|GK 0.061 . PF3D7_1217900 141 MSTSKGK|LI 0.076 . PF3D7_1217900 205 SNNISCK|TL 0.072 . PF3D7_1217900 208 ISCKTLK|LM 0.068 . PF3D7_1217900 213 LKLMEEK|TS 0.067 . PF3D7_1217900 225 GNMNNIK|NM 0.075 . PF3D7_1217900 238 NDIISLK|EN 0.060 . PF3D7_1217900 251 NNENIGK|KI 0.071 . PF3D7_1217900 252 NENIGKK|ID 0.085 . PF3D7_1217900 258 KIDDSCK|LP 0.066 . PF3D7_1217900 269 SLENFFK|DC 0.076 . PF3D7_1217900 275 KDCEIEK|LL 0.066 . PF3D7_1217900 282 LLNDYIK|DE 0.077 . PF3D7_1217900 285 DYIKDEK|YG 0.056 . PF3D7_1217900 291 KYGVEEK|KK 0.057 . PF3D7_1217900 292 YGVEEKK|KF 0.111 . PF3D7_1217900 293 GVEEKKK|FF 0.116 . PF3D7_1217900 299 KFFSFLK|TF 0.059 . PF3D7_1217900 313 ENEDLLK|NR 0.056 . PF3D7_1217900 315 EDLLKNR|II 0.102 . PF3D7_1217900 319 KNRIIYK|KK 0.071 . PF3D7_1217900 320 NRIIYKK|KH 0.090 . PF3D7_1217900 321 RIIYKKK|HP 0.103 . PF3D7_1217900 367 TIYIDMK|KI 0.071 . PF3D7_1217900 368 IYIDMKK|IK 0.102 . PF3D7_1217900 370 IDMKKIK|ST 0.134 . PF3D7_1217900 384 LHLVINK|EI 0.062 . PF3D7_1217900 389 NKEIFLK|NK 0.065 . PF3D7_1217900 391 EIFLKNK|DP 0.090 . PF3D7_1217900 404 NHVLYLK|DI 0.068 . PF3D7_1217900 416 ISNDNDK|AK 0.080 . PF3D7_1217900 418 NDNDKAK|NN 0.097 . PF3D7_1217900 435 LSHMFLK|NN 0.076 . PF3D7_1217900 458 VLNNIIK|AG 0.074 . PF3D7_1217900 465 AGAQEEK|QY 0.064 . PF3D7_1217900 470 EKQYILR|LN 0.086 . PF3D7_1217900 473 YILRLNK|II 0.128 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1217900 ATGGCAACAAAGTTCAGTGTTAAATTGAAGATATATGACTTGTCTAGGGGAATGGTCAAA ACATGGTCTCCTCTTTTGATTGGGAAACAAATCGACGGGGTGTGGCATACAGCCGTCTTG GTTTATAACATGGAATATTTTTACGGGGGAGGTATTTTATGCTTGGAACAACAAGAATTT GAAACGTTTTATAATATAAAACCAGTAGATATTATAGATATGGGAACAACCGAATTACTA CAAACACATTTTCATGAATATCTAAATGGTATTCAAAAAAATTTCACTGTAGATAAATAT AATATAGTTAATTGGAATTGTAATAATTTTACAAATGAAGTTTGTAATTTTCTTGTTGGT AAAAATATACCACAATATATTTTAAATACTCCATATGAAGTTATGTCCACAAGTAAAGGA AAACTTATCCTTGATATGATGCAATCGTATCAAAGTTCCATTGCTCCAGGATTTGATAAT AATCAAAATAATGCAACTAACCAACAAAATAATCAATCAATTCAAAATAATATAGCTAGC CAAGATAATACATTAATTTCAAATAATATAGCTAGCCAAGATAATACATTAATTTCAAAT AATATATCATGTAAAACATTAAAATTAATGGAAGAAAAAACATCAAGTATCGATGGAAAT ATGAATAATATAAAAAATATGTCATCTAATGAAAATGACATAATATCATTAAAAGAAAAT TATAATATTCATAATAATGAAAATATTGGAAAAAAAATAGATGACTCATGTAAATTACCA AGTGTGTCTTTAGAAAATTTCTTTAAAGATTGTGAGATAGAGAAATTATTAAATGATTAT ATAAAAGATGAGAAATATGGTGTGGAGGAGAAAAAAAAATTTTTTAGTTTTTTAAAAACA TTTTATGATAATATATTAGAAAATGAAGATTTATTAAAGAACCGAATTATTTATAAAAAA AAACATCCTATGTTTTTTAATAATATTCATACTATGAATGAGTATGATAATATATTATCA TCTTTATCATTTTGTATGGGATTTGTGCAAAATAATGAGGCAACTAATTTACAGCATTTT ACAATATACATAGATATGAAAAAAATTAAAAGTACCACGTTTCAACAACATTTACATCTT GTAATAAATAAAGAAATATTCTTAAAAAATAAAGATCCATCAATATATGAAAATCACGTT TTATATTTGAAAGATATATCTGAATATATTTCTAATGATAATGACAAAGCAAAAAATAAT TCACAAAATGGTCTCTTTGTTTTTTTATCACATATGTTTTTAAAAAATAATGTAGATATG AACAATACACAAAATGATATTTCATCTTTTCAAGTTTTGAATAATATAATTAAAGCAGGT GCGCAAGAGGAAAAACAATATATTCTAAGACTAAACAAAATTATAAATGATCATATACAA TCTTTAACATGA
  • Download Fasta

  • Fasta :-

    MATKFSVKLKIYDLSRGMVKTWSPLLIGKQIDGVWHTAVLVYNMEYFYGGGILCLEQQEF ETFYNIKPVDIIDMGTTELLQTHFHEYLNGIQKNFTVDKYNIVNWNCNNFTNEVCNFLVG KNIPQYILNTPYEVMSTSKGKLILDMMQSYQSSIAPGFDNNQNNATNQQNNQSIQNNIAS QDNTLISNNIASQDNTLISNNISCKTLKLMEEKTSSIDGNMNNIKNMSSNENDIISLKEN YNIHNNENIGKKIDDSCKLPSVSLENFFKDCEIEKLLNDYIKDEKYGVEEKKKFFSFLKT FYDNILENEDLLKNRIIYKKKHPMFFNNIHTMNEYDNILSSLSFCMGFVQNNEATNLQHF TIYIDMKKIKSTTFQQHLHLVINKEIFLKNKDPSIYENHVLYLKDISEYISNDNDKAKNN SQNGLFVFLSHMFLKNNVDMNNTQNDISSFQVLNNIIKAGAQEEKQYILRLNKIINDHIQ SLT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1217900215 SEEKTSSIDG0.993unspPF3D7_1217900394 SNKDPSIYEN0.996unsp

2277.t00173      MAL12P1.173      PFL0865w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India