PF3D7_1349700 | peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      GO:0016020      

  • Computed_GO_Components:  integral component of membrane      membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0006810      

  • Computed_GO_Processes:  transport      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1349700OTHER0.9999790.0000020.000020
No Results

  • Fasta :-

    >PF3D7_1349700 MIFDFALNNCCERNQYITFINISVCAIINIICWKWKILEPFKLLTVFLHEFSHASACWLT GGKVKAIEVNKDHGGSTRTVGGNQYLILPAGYIGSCFYGMFFILMAYLSKWTLLISTVFL CFLLLLVLVVYAKNMFLRFLCLLFLSITISIWVLCEYYKDKVYYWPLIIIMTFIGVLNEM YSIVDIFEDLITRSTPDSDSYKYAKLTKCSSKLCGVLWLLINFFFIILTIYLIGAIQVKN FDTELYHKVGIQIKK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1349700.fa Sequence name : PF3D7_1349700 Sequence length : 255 VALUES OF COMPUTED PARAMETERS Coef20 : 4.158 CoefTot : 0.000 ChDiff : 6 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.618 3.206 0.628 0.961 MesoH : 1.511 1.803 0.229 0.642 MuHd_075 : 33.315 23.113 10.749 7.201 MuHd_095 : 23.715 17.923 8.588 3.797 MuHd_100 : 16.727 16.274 7.431 3.121 MuHd_105 : 8.788 11.971 5.595 1.712 Hmax_075 : 10.033 13.300 3.066 4.910 Hmax_095 : 11.112 13.737 3.350 4.532 Hmax_100 : 10.000 11.900 3.562 3.780 Hmax_105 : 1.050 12.717 1.569 2.695 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9471 0.0529 DFMC : 0.9545 0.0455
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 255 PF3D7_1349700 MIFDFALNNCCERNQYITFINISVCAIINIICWKWKILEPFKLLTVFLHEFSHASACWLTGGKVKAIEVNKDHGGSTRTV 80 GGNQYLILPAGYIGSCFYGMFFILMAYLSKWTLLISTVFLCFLLLLVLVVYAKNMFLRFLCLLFLSITISIWVLCEYYKD 160 KVYYWPLIIIMTFIGVLNEMYSIVDIFEDLITRSTPDSDSYKYAKLTKCSSKLCGVLWLLINFFFIILTIYLIGAIQVKN 240 FDTELYHKVGIQIKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1349700 13 LNNCCER|NQ 0.081 . PF3D7_1349700 34 INIICWK|WK 0.062 . PF3D7_1349700 36 IICWKWK|IL 0.074 . PF3D7_1349700 42 KILEPFK|LL 0.062 . PF3D7_1349700 63 CWLTGGK|VK 0.051 . PF3D7_1349700 65 LTGGKVK|AI 0.082 . PF3D7_1349700 71 KAIEVNK|DH 0.088 . PF3D7_1349700 78 DHGGSTR|TV 0.174 . PF3D7_1349700 110 LMAYLSK|WT 0.061 . PF3D7_1349700 133 VLVVYAK|NM 0.057 . PF3D7_1349700 138 AKNMFLR|FL 0.128 . PF3D7_1349700 159 VLCEYYK|DK 0.062 . PF3D7_1349700 161 CEYYKDK|VY 0.063 . PF3D7_1349700 193 FEDLITR|ST 0.090 . PF3D7_1349700 202 PDSDSYK|YA 0.077 . PF3D7_1349700 205 DSYKYAK|LT 0.062 . PF3D7_1349700 208 KYAKLTK|CS 0.067 . PF3D7_1349700 212 LTKCSSK|LC 0.065 . PF3D7_1349700 239 IGAIQVK|NF 0.074 . PF3D7_1349700 248 DTELYHK|VG 0.056 . PF3D7_1349700 254 KVGIQIK|K- 0.064 . PF3D7_1349700 255 VGIQIKK|-- 0.100 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1349700 ATGATATTTGATTTTGCATTAAATAATTGCTGTGAAAGAAATCAATATATAACATTCATA AATATTTCCGTGTGTGCAATTATAAATATAATTTGTTGGAAATGGAAAATTCTAGAACCA TTCAAATTGTTGACAGTTTTTTTACATGAGTTTTCTCATGCCTCTGCTTGTTGGTTAACT GGAGGGAAGGTCAAGGCAATAGAGGTAAATAAAGATCATGGAGGTTCTACAAGAACAGTT GGCGGTAATCAATATCTTATATTACCAGCTGGTTATATTGGTTCATGTTTTTATGGAATG TTTTTTATATTGATGGCTTATTTAAGTAAATGGACTTTATTAATATCAACGGTATTTTTA TGTTTTTTATTATTACTAGTACTAGTAGTATATGCAAAGAATATGTTTTTACGTTTTCTG TGTTTATTATTTTTAAGTATAACTATATCCATATGGGTATTATGTGAATATTATAAGGAT AAAGTATATTATTGGCCATTAATAATAATAATGACTTTTATAGGAGTATTAAACGAAATG TATAGTATAGTAGATATTTTTGAAGATTTAATTACGAGATCCACACCGGATTCAGATTCA TATAAGTATGCCAAACTAACAAAATGTAGTTCTAAATTATGTGGAGTCCTATGGCTTTTA ATTAATTTCTTTTTTATTATTTTAACGATTTATTTAATTGGAGCTATTCAAGTCAAAAAT TTTGATACAGAATTATATCACAAAGTTGGTATACAGATCAAAAAGTAA
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  • Fasta :-

    MIFDFALNNCCERNQYITFINISVCAIINIICWKWKILEPFKLLTVFLHEFSHASACWLT GGKVKAIEVNKDHGGSTRTVGGNQYLILPAGYIGSCFYGMFFILMAYLSKWTLLISTVFL CFLLLLVLVVYAKNMFLRFLCLLFLSITISIWVLCEYYKDKVYYWPLIIIMTFIGVLNEM YSIVDIFEDLITRSTPDSDSYKYAKLTKCSSKLCGVLWLLINFFFIILTIYLIGAIQVKN FDTELYHKVGIQIKK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_1349700200 SPDSDSYKYA0.996unsp

PF13_0260      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India