PF3D7_1407900 | plasmepsin I

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1407900OTHER0.9996190.0000860.000294
No Results

  • Fasta :-

    >PF3D7_1407900 MALSIKEDFSSAFAKNESAVNSSTFNNNMKTWKIQKRFQILYVFFFLLITGALFYYLIDN VLFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKP HLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCNTIGCKTKNL YDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYKFIEVTDTNGFEPAYTL GQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHKGYLTIGGIEDRF YEGQLTYEKLNHDLYWQVDLDLHFGNLTVEKATAIVDSGTSSITAPTEFLNKFFEGLDVV KIPFLPLYITTCNNPKLPTLEFRSATNVYTLEPEYYLQQIFDFGISLCMVSIIPVDLNKN TFILGDPFMRKYFTVFDYDNHTVGFALAKKKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1407900.fa Sequence name : PF3D7_1407900 Sequence length : 452 VALUES OF COMPUTED PARAMETERS Coef20 : 4.163 CoefTot : 0.262 ChDiff : -1 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.206 2.253 0.356 0.878 MesoH : -0.237 0.435 -0.288 0.300 MuHd_075 : 24.726 13.503 7.529 4.509 MuHd_095 : 15.156 12.048 3.169 4.583 MuHd_100 : 10.831 10.352 2.145 3.705 MuHd_105 : 7.845 8.666 1.697 2.555 Hmax_075 : 15.517 12.017 2.163 4.737 Hmax_095 : 3.587 7.525 -1.693 3.640 Hmax_100 : 12.300 12.100 0.507 4.900 Hmax_105 : 0.100 6.300 -2.625 2.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8840 0.1160 DFMC : 0.8761 0.1239
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 452 PF3D7_1407900 MALSIKEDFSSAFAKNESAVNSSTFNNNMKTWKIQKRFQILYVFFFLLITGALFYYLIDNVLFPKNKKINEIMNTSKHVI 80 IGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKPHLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGS 160 ANLWVPSAQCNTIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYKFIEVTDTNGFEPAYTL 240 GQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHKGYLTIGGIEDRFYEGQLTYEKLNHDLYWQVDL 320 DLHFGNLTVEKATAIVDSGTSSITAPTEFLNKFFEGLDVVKIPFLPLYITTCNNPKLPTLEFRSATNVYTLEPEYYLQQI 400 FDFGISLCMVSIIPVDLNKNTFILGDPFMRKYFTVFDYDNHTVGFALAKKKL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1407900 6 -MALSIK|ED 0.061 . PF3D7_1407900 15 FSSAFAK|NE 0.101 . PF3D7_1407900 30 TFNNNMK|TW 0.071 . PF3D7_1407900 33 NNMKTWK|IQ 0.062 . PF3D7_1407900 36 KTWKIQK|RF 0.057 . PF3D7_1407900 37 TWKIQKR|FQ 0.234 . PF3D7_1407900 65 DNVLFPK|NK 0.065 . PF3D7_1407900 67 VLFPKNK|KI 0.078 . PF3D7_1407900 68 LFPKNKK|IN 0.091 . PF3D7_1407900 77 EIMNTSK|HV 0.090 . PF3D7_1407900 91 IENSHDR|IM 0.101 . PF3D7_1407900 94 SHDRIMK|TV 0.193 . PF3D7_1407900 97 RIMKTVK|QH 0.061 . PF3D7_1407900 100 KTVKQHR|LK 0.087 . PF3D7_1407900 102 VKQHRLK|NY 0.065 . PF3D7_1407900 106 RLKNYIK|ES 0.065 . PF3D7_1407900 110 YIKESLK|FF 0.076 . PF3D7_1407900 113 ESLKFFK|TG 0.065 . PF3D7_1407900 119 KTGLTQK|PH 0.056 . PF3D7_1407900 149 AQIGDNK|QK 0.061 . PF3D7_1407900 151 IGDNKQK|FA 0.088 . PF3D7_1407900 176 CNTIGCK|TK 0.054 . PF3D7_1407900 178 TIGCKTK|NL 0.084 . PF3D7_1407900 185 NLYDSNK|SK 0.085 . PF3D7_1407900 187 YDSNKSK|TY 0.085 . PF3D7_1407900 191 KSKTYEK|DG 0.082 . PF3D7_1407900 195 YEKDGTK|VE 0.054 . PF3D7_1407900 211 VSGFFSK|DI 0.080 . PF3D7_1407900 224 NLSFPYK|FI 0.096 . PF3D7_1407900 252 IVGLGWK|DL 0.070 . PF3D7_1407900 267 PVVVELK|NQ 0.066 . PF3D7_1407900 271 ELKNQNK|IE 0.065 . PF3D7_1407900 286 YLPFDDK|HK 0.062 . PF3D7_1407900 288 PFDDKHK|GY 0.068 . PF3D7_1407900 299 IGGIEDR|FY 0.131 . PF3D7_1407900 309 GQLTYEK|LN 0.056 . PF3D7_1407900 331 GNLTVEK|AT 0.070 . PF3D7_1407900 352 PTEFLNK|FF 0.062 . PF3D7_1407900 361 EGLDVVK|IP 0.056 . PF3D7_1407900 376 TTCNNPK|LP 0.060 . PF3D7_1407900 383 LPTLEFR|SA 0.189 . PF3D7_1407900 419 IPVDLNK|NT 0.066 . PF3D7_1407900 430 LGDPFMR|KY 0.091 . PF3D7_1407900 431 GDPFMRK|YF 0.077 . PF3D7_1407900 449 VGFALAK|KK 0.060 . PF3D7_1407900 450 GFALAKK|KL 0.093 . PF3D7_1407900 451 FALAKKK|L- 0.096 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1407900 ATGGCTTTATCAATTAAAGAAGATTTTTCAAGCGCTTTTGCGAAAAATGAATCAGCTGTG AATAGCTCTACATTTAATAATAATATGAAAACATGGAAGATTCAGAAACGATTTCAAATA TTATACGTGTTTTTTTTCTTATTGATTACCGGAGCATTATTTTATTATCTTATAGATAAT GTATTATTCCCAAAAAATAAAAAGATAAATGAAATTATGAATACCTCAAAACATGTAATA ATTGGATTTAGTATTGAAAATTCTCATGACAGAATTATGAAAACAGTAAAACAACACAGA TTAAAAAATTATATTAAAGAATCCTTGAAATTTTTCAAAACAGGACTTACACAAAAACCA CATTTAGGTAATGCTGGTGATAGTGTAACATTAAATGATGTAGCTAATGTAATGTATTAT GGAGAAGCTCAAATTGGAGATAATAAACAAAAGTTTGCTTTTATTTTTGATACAGGATCA GCAAATTTATGGGTTCCAAGTGCTCAATGTAATACTATTGGCTGTAAAACAAAAAATCTT TATGATTCTAATAAATCCAAAACATATGAAAAAGATGGTACTAAAGTAGAAATGAATTAT GTATCTGGAACAGTAAGCGGATTTTTTAGTAAAGATATAGTTACTATAGCAAATTTATCA TTTCCATATAAATTTATTGAAGTTACAGATACCAATGGTTTCGAACCAGCTTATACCTTA GGACAATTTGATGGTATAGTAGGTTTAGGATGGAAAGATTTGTCTATAGGTTCAGTAGAT CCTGTTGTTGTCGAATTAAAAAATCAAAATAAAATCGAACAAGCCGTTTTTACCTTTTAT TTACCATTTGATGATAAACACAAAGGTTATTTAACCATAGGAGGTATTGAAGATAGATTT TATGAAGGTCAATTAACTTATGAAAAATTAAACCACGATTTATATTGGCAAGTTGATTTA GATCTACATTTTGGTAATTTAACTGTAGAAAAAGCTACTGCAATTGTTGACAGTGGTACT AGTTCTATAACGGCACCAACTGAATTCCTTAACAAATTCTTTGAAGGTTTAGATGTTGTT AAAATACCTTTCTTACCATTATATATAACTACATGTAATAACCCTAAATTACCAACTCTA GAATTCAGATCAGCAACAAATGTTTATACCTTAGAACCAGAATACTACTTACAACAAATA TTCGATTTTGGTATATCATTATGTATGGTATCTATAATACCTGTTGATTTGAACAAAAAT ACCTTCATATTAGGTGACCCATTCATGAGAAAATATTTCACCGTCTTTGATTATGATAAT CACACTGTTGGTTTCGCCCTTGCCAAAAAAAAATTGTAA
  • Download Fasta

  • Fasta :-

    MALSIKEDFSSAFAKNESAVNSSTFNNNMKTWKIQKRFQILYVFFFLLITGALFYYLIDN VLFPKNKKINEIMNTSKHVIIGFSIENSHDRIMKTVKQHRLKNYIKESLKFFKTGLTQKP HLGNAGDSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCNTIGCKTKNL YDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYKFIEVTDTNGFEPAYTL GQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHKGYLTIGGIEDRF YEGQLTYEKLNHDLYWQVDLDLHFGNLTVEKATAIVDSGTSSITAPTEFLNKFFEGLDVV KIPFLPLYITTCNNPKLPTLEFRSATNVYTLEPEYYLQQIFDFGISLCMVSIIPVDLNKN TFILGDPFMRKYFTVFDYDNHTVGFALAKKKL

  • title: catalytic residue
  • coordinates: D157,D337
No Results
No Results
No Results

PF14_0076      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India