PF3D7_1408000 | plasmepsin II

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1408000OTHER0.9999800.0000150.000005
No Results

  • Fasta :-

    >PF3D7_1408000 MDITVREHDFKHGFIKSNSTFDGLNIDNSKNKKKIQKGFQILYVLLFCSVMCGLFYYVYE NVWLQRDNEMNEILKNSEHLTIGFKVENAHDRILKTIKTHKLKNYIKESVNFLNSGLTKT NYLGSSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKH LYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYKFIEVIDTNGFEPTYT ASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEER FYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDV IKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV PTFILGDPFMRKYFTVFDYDNQSVGIALAKKNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1408000.fa Sequence name : PF3D7_1408000 Sequence length : 453 VALUES OF COMPUTED PARAMETERS Coef20 : 3.546 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.047 2.200 0.494 0.747 MesoH : -0.271 0.370 -0.309 0.299 MuHd_075 : 35.852 21.668 10.665 6.934 MuHd_095 : 7.448 4.898 1.588 1.414 MuHd_100 : 16.893 6.995 3.664 2.856 MuHd_105 : 24.409 8.045 5.230 3.536 Hmax_075 : 8.517 14.817 0.442 5.413 Hmax_095 : -4.500 3.700 -4.527 2.180 Hmax_100 : -4.500 0.900 -3.186 0.930 Hmax_105 : 4.783 6.300 -0.672 3.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9867 0.0133 DFMC : 0.9849 0.0151
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 453 PF3D7_1408000 MDITVREHDFKHGFIKSNSTFDGLNIDNSKNKKKIQKGFQILYVLLFCSVMCGLFYYVYENVWLQRDNEMNEILKNSEHL 80 TIGFKVENAHDRILKTIKTHKLKNYIKESVNFLNSGLTKTNYLGSSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTG 160 SANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYKFIEVIDTNGFEPTYT 240 ASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQIT 320 LDAHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQH 400 IEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNQSVGIALAKKNL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1408000 6 -MDITVR|EH 0.070 . PF3D7_1408000 11 VREHDFK|HG 0.071 . PF3D7_1408000 16 FKHGFIK|SN 0.102 . PF3D7_1408000 30 LNIDNSK|NK 0.067 . PF3D7_1408000 32 IDNSKNK|KK 0.086 . PF3D7_1408000 33 DNSKNKK|KI 0.170 . PF3D7_1408000 34 NSKNKKK|IQ 0.109 . PF3D7_1408000 37 NKKKIQK|GF 0.070 . PF3D7_1408000 66 ENVWLQR|DN 0.122 . PF3D7_1408000 75 EMNEILK|NS 0.062 . PF3D7_1408000 85 HLTIGFK|VE 0.055 . PF3D7_1408000 92 VENAHDR|IL 0.125 . PF3D7_1408000 95 AHDRILK|TI 0.100 . PF3D7_1408000 98 RILKTIK|TH 0.054 . PF3D7_1408000 101 KTIKTHK|LK 0.062 . PF3D7_1408000 103 IKTHKLK|NY 0.066 . PF3D7_1408000 107 KLKNYIK|ES 0.062 . PF3D7_1408000 119 LNSGLTK|TN 0.065 . PF3D7_1408000 170 LWVPSVK|CT 0.075 . PF3D7_1408000 179 TAGCLTK|HL 0.073 . PF3D7_1408000 186 HLYDSSK|SR 0.083 . PF3D7_1408000 188 YDSSKSR|TY 0.131 . PF3D7_1408000 192 KSRTYEK|DG 0.090 . PF3D7_1408000 196 YEKDGTK|VE 0.055 . PF3D7_1408000 212 VSGFFSK|DL 0.083 . PF3D7_1408000 225 NLSLPYK|FI 0.104 . PF3D7_1408000 253 ILGLGWK|DL 0.073 . PF3D7_1408000 268 PIVVELK|NQ 0.067 . PF3D7_1408000 272 ELKNQNK|IE 0.060 . PF3D7_1408000 287 YLPVHDK|HT 0.070 . PF3D7_1408000 300 IGGIEER|FY 0.104 . PF3D7_1408000 310 GPLTYEK|LN 0.058 . PF3D7_1408000 332 GNIMLEK|AN 0.071 . PF3D7_1408000 353 PTDFLNK|ML 0.055 . PF3D7_1408000 362 QNLDVIK|VP 0.054 . PF3D7_1408000 377 TLCNNSK|LP 0.060 . PF3D7_1408000 389 FTSENGK|YT 0.066 . PF3D7_1408000 431 LGDPFMR|KY 0.091 . PF3D7_1408000 432 GDPFMRK|YF 0.077 . PF3D7_1408000 450 VGIALAK|KN 0.061 . PF3D7_1408000 451 GIALAKK|NL 0.100 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1408000 ATGGATATTACAGTAAGAGAACATGATTTTAAACATGGCTTTATCAAAAGCAATTCAACA TTTGATGGATTAAACATTGACAATTCAAAGAACAAAAAAAAAATACAGAAAGGATTTCAA ATACTATATGTACTTCTCTTTTGTAGTGTAATGTGTGGTTTATTTTATTATGTGTATGAA AATGTATGGCTTCAAAGAGATAATGAAATGAATGAAATTTTAAAAAATTCCGAACATTTA ACTATTGGATTTAAAGTTGAAAATGCACATGATAGAATTTTGAAAACTATAAAAACACAT AAATTAAAAAATTACATTAAAGAATCTGTCAATTTTCTTAATTCAGGACTTACTAAAACA AATTATTTAGGTAGTTCAAATGATAATATCGAATTAGTAGATTTCCAAAATATAATGTTT TATGGTGATGCAGAAGTTGGAGATAACCAACAACCATTTACATTTATTCTTGATACAGGA TCTGCTAATTTATGGGTCCCAAGTGTTAAATGTACAACTGCAGGATGTTTAACTAAACAT CTATATGATTCATCTAAATCAAGAACATATGAAAAAGATGGAACCAAAGTAGAAATGAAT TATGTGTCAGGAACTGTTAGTGGATTTTTCAGTAAAGATTTAGTAACTGTTGGTAATTTA TCTCTTCCATATAAATTTATTGAAGTAATAGATACTAATGGATTCGAACCAACTTATACT GCTTCAACATTTGATGGTATCCTTGGTTTAGGATGGAAAGATTTATCAATAGGTTCAGTA GATCCAATTGTTGTTGAATTAAAAAACCAAAACAAAATTGAAAATGCTCTTTTCACCTTT TACTTACCTGTACATGATAAACATACAGGATTCTTAACCATTGGTGGTATTGAAGAAAGA TTTTATGAAGGACCACTAACTTACGAAAAATTAAACCACGATTTATATTGGCAAATAACT TTAGATGCACACGTTGGAAATATAATGTTAGAAAAAGCAAACTGTATTGTAGATAGTGGT ACTAGTGCCATTACTGTACCAACTGACTTTTTAAATAAAATGTTGCAGAATTTAGATGTT ATCAAAGTCCCATTCTTACCTTTCTATGTAACTCTTTGTAACAACAGCAAATTACCAACT TTTGAATTTACCTCAGAAAATGGTAAATACACATTAGAACCTGAATACTACCTTCAACAC ATAGAAGATGTTGGTCCAGGATTATGTATGCTTAATATCATAGGATTAGATTTTCCAGTA CCAACCTTTATTCTAGGTGACCCATTCATGAGAAAATATTTTACCGTCTTTGATTATGAT AATCAGAGTGTTGGTATTGCTCTTGCTAAAAAGAATTTATAA
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  • Fasta :-

    MDITVREHDFKHGFIKSNSTFDGLNIDNSKNKKKIQKGFQILYVLLFCSVMCGLFYYVYE NVWLQRDNEMNEILKNSEHLTIGFKVENAHDRILKTIKTHKLKNYIKESVNFLNSGLTKT NYLGSSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKH LYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYKFIEVIDTNGFEPTYT ASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEER FYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDV IKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPV PTFILGDPFMRKYFTVFDYDNQSVGIALAKKNL

  • title: catalytic residue
  • coordinates: D158,D338
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_140800019 SIKSNSTFDG0.991unsp

PF14_0077      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India