PF3D7_1408100 | plasmepsin III

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1408100OTHER0.9998010.0001480.000052
No Results

  • Fasta :-

    >PF3D7_1408100 MNLTIKEEDFTNTFMKNEESFNTFRVTKVKRWNAKRLFKILFVTVFIVLAGGFSYYIFEN FVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKS YLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNH YDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSE SDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERF FDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVF KVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKN TFVLGDPFMRKYFTVYDYDNHTVGFALAKNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1408100.fa Sequence name : PF3D7_1408100 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 3.429 CoefTot : -0.125 ChDiff : 2 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.094 2.388 0.367 0.837 MesoH : -0.286 0.364 -0.340 0.282 MuHd_075 : 34.646 22.984 10.457 6.695 MuHd_095 : 11.909 6.808 3.478 2.628 MuHd_100 : 17.118 8.415 4.629 3.525 MuHd_105 : 20.811 8.924 5.173 4.007 Hmax_075 : 9.917 12.133 -0.240 4.877 Hmax_095 : -1.600 3.600 -3.354 2.610 Hmax_100 : -0.700 1.000 -3.353 1.920 Hmax_105 : -0.400 1.983 -3.119 2.252 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9780 0.0220 DFMC : 0.9712 0.0288
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 PF3D7_1408100 MNLTIKEEDFTNTFMKNEESFNTFRVTKVKRWNAKRLFKILFVTVFIVLAGGFSYYIFENFVFQKNRKINHIIKTSKYST 80 VGFNIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKSYLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTAS 160 SNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSE 240 SDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDL 320 DVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPL 400 ENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAKNL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1408100 6 -MNLTIK|EE 0.059 . PF3D7_1408100 16 FTNTFMK|NE 0.066 . PF3D7_1408100 25 ESFNTFR|VT 0.084 . PF3D7_1408100 28 NTFRVTK|VK 0.103 . PF3D7_1408100 30 FRVTKVK|RW 0.071 . PF3D7_1408100 31 RVTKVKR|WN 0.177 . PF3D7_1408100 35 VKRWNAK|RL 0.088 . PF3D7_1408100 36 KRWNAKR|LF 0.194 . PF3D7_1408100 39 NAKRLFK|IL 0.131 . PF3D7_1408100 65 ENFVFQK|NR 0.059 . PF3D7_1408100 67 FVFQKNR|KI 0.137 . PF3D7_1408100 68 VFQKNRK|IN 0.095 . PF3D7_1408100 74 KINHIIK|TS 0.068 . PF3D7_1408100 77 HIIKTSK|YS 0.081 . PF3D7_1408100 91 IENSYDR|LM 0.089 . PF3D7_1408100 94 SYDRLMK|TI 0.108 . PF3D7_1408100 97 RLMKTIK|EH 0.057 . PF3D7_1408100 100 KTIKEHK|LK 0.059 . PF3D7_1408100 102 IKEHKLK|NY 0.068 . PF3D7_1408100 106 KLKNYIK|ES 0.062 . PF3D7_1408100 110 YIKESVK|LF 0.064 . PF3D7_1408100 114 SVKLFNK|GL 0.063 . PF3D7_1408100 118 FNKGLTK|KS 0.056 . PF3D7_1408100 119 NKGLTKK|SY 0.184 . PF3D7_1408100 132 FDNVELK|DL 0.079 . PF3D7_1408100 144 LSFGEAK|LG 0.068 . PF3D7_1408100 151 LGDNGQK|FN 0.064 . PF3D7_1408100 169 VWVPSIK|CT 0.069 . PF3D7_1408100 178 SESCESK|NH 0.070 . PF3D7_1408100 185 NHYDSSK|SK 0.085 . PF3D7_1408100 187 YDSSKSK|TY 0.077 . PF3D7_1408100 191 KSKTYEK|DD 0.075 . PF3D7_1408100 197 KDDTPVK|LT 0.070 . PF3D7_1408100 201 PVKLTSK|AG 0.058 . PF3D7_1408100 211 ISGIFSK|DL 0.088 . PF3D7_1408100 218 DLVTIGK|LS 0.057 . PF3D7_1408100 224 KLSVPYK|FI 0.116 . PF3D7_1408100 252 VFGLGWK|DL 0.066 . PF3D7_1408100 267 PYIVELK|TQ 0.064 . PF3D7_1408100 271 ELKTQNK|IE 0.060 . PF3D7_1408100 286 YLPPENK|NK 0.058 . PF3D7_1408100 288 PPENKNK|GY 0.080 . PF3D7_1408100 299 IGGIEER|FF 0.099 . PF3D7_1408100 309 GPLNYEK|LN 0.065 . PF3D7_1408100 330 FGNVSSK|KA 0.091 . PF3D7_1408100 331 GNVSSKK|AN 0.101 . PF3D7_1408100 361 ESASVFK|VP 0.061 . PF3D7_1408100 376 TTCGNTK|LP 0.056 . PF3D7_1408100 383 LPTLEYR|SP 0.131 . PF3D7_1408100 387 EYRSPNK|VY 0.060 . PF3D7_1408100 394 VYTLEPK|QY 0.059 . PF3D7_1408100 419 VPIDLEK|NT 0.064 . PF3D7_1408100 430 LGDPFMR|KY 0.086 . PF3D7_1408100 431 GDPFMRK|YF 0.080 . PF3D7_1408100 449 VGFALAK|NL 0.067 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1408100 ATGAATTTAACCATTAAAGAAGAAGATTTTACCAACACCTTCATGAAAAATGAAGAATCC TTTAACACGTTTCGAGTAACTAAAGTAAAAAGATGGAATGCTAAAAGATTATTTAAAATA TTATTTGTGACAGTTTTCATAGTTTTGGCAGGAGGTTTTTCTTATTATATTTTTGAAAAT TTCGTTTTTCAAAAGAACCGTAAAATTAATCACATAATTAAGACTTCAAAATATTCGACA GTAGGATTTAATATTGAAAATTCTTATGATAGACTTATGAAAACAATTAAAGAGCATAAA TTAAAAAATTATATAAAAGAATCAGTAAAACTTTTTAATAAAGGTTTAACCAAAAAAAGT TATTTAGGTAGTGAGTTTGATAATGTGGAATTAAAAGATTTAGCAAATGTATTATCTTTT GGAGAGGCAAAGCTTGGAGATAATGGTCAAAAATTTAATTTCTTATTCCATACAGCTTCA TCTAATGTATGGGTACCCAGTATAAAATGTACATCAGAGTCTTGTGAAAGTAAAAATCAT TATGATTCATCAAAATCAAAAACATATGAAAAAGATGATACGCCTGTTAAATTGACAAGT AAAGCTGGTACAATAAGTGGAATATTTAGTAAAGATTTAGTAACTATTGGTAAATTATCA GTACCCTATAAATTTATTGAAATGACGGAAATTGTTGGATTTGAACCTTTTTATTCTGAA TCAGACGTTGATGGTGTTTTCGGTTTAGGATGGAAAGATTTATCCATAGGCTCTATAGAT CCATATATTGTAGAATTAAAAACACAAAATAAAATTGAACAAGCCGTTTATTCCATTTAT TTACCACCAGAAAACAAAAATAAAGGTTATTTAACCATAGGAGGTATCGAAGAAAGATTC TTTGATGGACCATTGAACTATGAAAAATTAAATCACGATTTAATGTGGCAAGTTGATTTA GATGTACATTTTGGTAATGTATCTTCCAAAAAAGCAAACGTTATTTTAGATAGTGCCACC AGTGTCATAACTGTACCAACAGAATTTTTTAATCAATTCGTAGAATCTGCAAGTGTTTTC AAAGTTCCATTCTTATCTTTGTATGTAACCACTTGTGGTAACACGAAATTACCAACACTC GAATATCGTTCACCAAATAAAGTATATACTTTAGAACCTAAACAATACCTTGAACCATTA GAAAATATATTCTCAGCATTATGTATGCTTAACATTGTACCTATTGATTTAGAAAAAAAT ACCTTTGTTCTAGGTGACCCATTTATGAGAAAATATTTTACCGTTTATGATTACGATAAT CACACCGTTGGATTTGCTTTAGCCAAAAATTTATAA
  • Download Fasta

  • Fasta :-

    MNLTIKEEDFTNTFMKNEESFNTFRVTKVKRWNAKRLFKILFVTVFIVLAGGFSYYIFEN FVFQKNRKINHIIKTSKYSTVGFNIENSYDRLMKTIKEHKLKNYIKESVKLFNKGLTKKS YLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNH YDSSKSKTYEKDDTPVKLTSKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSE SDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERF FDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVF KVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKN TFVLGDPFMRKYFTVYDYDNHTVGFALAKNL

  • title: catalytic residue
  • coordinates: H157,D337
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_1408100183 SNHYDSSKSK0.992unsp

PF14_0078      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India