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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs:
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Curated_GO_Components:
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PF3D7_1436700
MNNKMLTRRILFSRYFHGPSLYKRYILIKNDIPEFIKRVNFNSMQKNNNDKDDKVKNLNI
QNNKNEEYAHTKENCDNIKSPFFNDILKKHDKKNPDVIPNFIIDFFTKESTDDKKNIYIN
EYKNVLLEFIQYKIEFSKDDSNKHQIKFVDIFSMLYFCYMERIYDLDFLTELSKQFDNIY
KSKNTKDLLNNININYLMMMFYYFSFLKVSNGTLDNILRDFIINNEEVEPVLIYKYFECL
SLLSDVHDNNKIVPIIEIFIENFYNFNNYILLNILQFLHKMNFFDKNIFSLLTRKINKNV
YEQNANLFEVCMLSRIYALYKNENITFNNYLLDDLIQTITRHEDNFQNDELYEEEDKEHY
NKVDKENDSSNIKQLNNNNNNNDHIEQFNNPDSININSNNDIDKNNETNDNDIHNLYIQE
IKNINRDNYTLFKNSLYNDGLNFYSFFLNSKSTNKNLFKKKENIHIEINNDKKKSTSKML
HMSQWDKLFFYEDYKTKDIKNEPFINMHKNKNGNNNNNNNNNNKNKNIDNKENLHIDKYI
NMYNDFIRENLYYEFNYQKMIDVFKNICIHLDNTKIAIYINKKDNMLSCNNNKICRYRKK
LLFIDNYYIGHIFYIIDSMLSLNMHHNSSNFNKLQNKVLNLIKNNETYIIDNFDSKEIKS
VLIFLVHTDRYYKESFIYSITHRIIDLYINNLCDAKTLSIYLYNLLPFTKQTIVKKNRFN
HTIKNVVYNTYLWLNNNKNVSNEQGQNNKILFYNNIKVTNYTLLQILSIYICKNVYFISL
PILASLLRSFSYLSFNDINFYNVFIPLFLKHIKYLKNVDILNITQAYNRQKINNKYFYYL
LSKQYQNANSKDNKKSSVEVKLIG
- Download Fasta
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MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1436700.fa
Sequence name : PF3D7_1436700
Sequence length : 864
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.295
CoefTot : -0.702
ChDiff : 14
ZoneTo : 30
KR : 7
DE : 0
CleavSite : 18
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.082 1.653 0.154 0.581
MesoH : -0.052 0.765 -0.260 0.349
MuHd_075 : 53.631 30.167 12.138 12.635
MuHd_095 : 18.531 10.530 5.331 5.855
MuHd_100 : 22.562 10.495 6.196 6.653
MuHd_105 : 23.743 9.169 5.853 6.257
Hmax_075 : 17.267 14.933 2.495 6.080
Hmax_095 : 3.600 7.962 -0.151 3.780
Hmax_100 : 9.000 6.500 0.958 4.820
Hmax_105 : 10.383 6.067 0.702 5.180
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0735 0.9265
DFMC : 0.1151 0.8849
This protein is probably imported in mitochondria.
f(Ser) = 0.0667 f(Arg) = 0.1333 CMi = 0.25974
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
864 PF3D7_1436700
MNNKMLTRRILFSRYFHGPSLYKRYILIKNDIPEFIKRVNFNSMQKNNNDKDDKVKNLNIQNNKNEEYAHTKENCDNIKS 80
PFFNDILKKHDKKNPDVIPNFIIDFFTKESTDDKKNIYINEYKNVLLEFIQYKIEFSKDDSNKHQIKFVDIFSMLYFCYM 160
ERIYDLDFLTELSKQFDNIYKSKNTKDLLNNININYLMMMFYYFSFLKVSNGTLDNILRDFIINNEEVEPVLIYKYFECL 240
SLLSDVHDNNKIVPIIEIFIENFYNFNNYILLNILQFLHKMNFFDKNIFSLLTRKINKNVYEQNANLFEVCMLSRIYALY 320
KNENITFNNYLLDDLIQTITRHEDNFQNDELYEEEDKEHYNKVDKENDSSNIKQLNNNNNNNDHIEQFNNPDSININSNN 400
DIDKNNETNDNDIHNLYIQEIKNINRDNYTLFKNSLYNDGLNFYSFFLNSKSTNKNLFKKKENIHIEINNDKKKSTSKML 480
HMSQWDKLFFYEDYKTKDIKNEPFINMHKNKNGNNNNNNNNNNKNKNIDNKENLHIDKYINMYNDFIRENLYYEFNYQKM 560
IDVFKNICIHLDNTKIAIYINKKDNMLSCNNNKICRYRKKLLFIDNYYIGHIFYIIDSMLSLNMHHNSSNFNKLQNKVLN 640
LIKNNETYIIDNFDSKEIKSVLIFLVHTDRYYKESFIYSITHRIIDLYINNLCDAKTLSIYLYNLLPFTKQTIVKKNRFN 720
HTIKNVVYNTYLWLNNNKNVSNEQGQNNKILFYNNIKVTNYTLLQILSIYICKNVYFISLPILASLLRSFSYLSFNDINF 800
YNVFIPLFLKHIKYLKNVDILNITQAYNRQKINNKYFYYLLSKQYQNANSKDNKKSSVEVKLIG 880
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
................................................................................ 480
................................................................................ 560
................................................................................ 640
................................................................................ 720
................................................................................ 800
................................................................ 880
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PF3D7_1436700 4 ---MNNK|ML 0.059 .
PF3D7_1436700 8 NNKMLTR|RI 0.079 .
PF3D7_1436700 9 NKMLTRR|IL 0.137 .
PF3D7_1436700 14 RRILFSR|YF 0.099 .
PF3D7_1436700 23 HGPSLYK|RY 0.056 .
PF3D7_1436700 24 GPSLYKR|YI 0.321 .
PF3D7_1436700 29 KRYILIK|ND 0.067 .
PF3D7_1436700 37 DIPEFIK|RV 0.061 .
PF3D7_1436700 38 IPEFIKR|VN 0.157 .
PF3D7_1436700 46 NFNSMQK|NN 0.062 .
PF3D7_1436700 51 QKNNNDK|DD 0.073 .
PF3D7_1436700 54 NNDKDDK|VK 0.054 .
PF3D7_1436700 56 DKDDKVK|NL 0.066 .
PF3D7_1436700 64 LNIQNNK|NE 0.061 .
PF3D7_1436700 72 EEYAHTK|EN 0.072 .
PF3D7_1436700 79 ENCDNIK|SP 0.070 .
PF3D7_1436700 88 FFNDILK|KH 0.063 .
PF3D7_1436700 89 FNDILKK|HD 0.098 .
PF3D7_1436700 92 ILKKHDK|KN 0.077 .
PF3D7_1436700 93 LKKHDKK|NP 0.110 .
PF3D7_1436700 108 IIDFFTK|ES 0.063 .
PF3D7_1436700 114 KESTDDK|KN 0.065 .
PF3D7_1436700 115 ESTDDKK|NI 0.096 .
PF3D7_1436700 123 IYINEYK|NV 0.067 .
PF3D7_1436700 133 LEFIQYK|IE 0.064 .
PF3D7_1436700 138 YKIEFSK|DD 0.074 .
PF3D7_1436700 143 SKDDSNK|HQ 0.073 .
PF3D7_1436700 147 SNKHQIK|FV 0.099 .
PF3D7_1436700 162 YFCYMER|IY 0.074 .
PF3D7_1436700 174 FLTELSK|QF 0.061 .
PF3D7_1436700 181 QFDNIYK|SK 0.069 .
PF3D7_1436700 183 DNIYKSK|NT 0.076 .
PF3D7_1436700 186 YKSKNTK|DL 0.080 .
PF3D7_1436700 208 YYFSFLK|VS 0.057 .
PF3D7_1436700 219 TLDNILR|DF 0.095 .
PF3D7_1436700 235 EPVLIYK|YF 0.062 .
PF3D7_1436700 251 DVHDNNK|IV 0.075 .
PF3D7_1436700 280 ILQFLHK|MN 0.064 .
PF3D7_1436700 286 KMNFFDK|NI 0.074 .
PF3D7_1436700 294 IFSLLTR|KI 0.094 .
PF3D7_1436700 295 FSLLTRK|IN 0.070 .
PF3D7_1436700 298 LTRKINK|NV 0.083 .
PF3D7_1436700 315 EVCMLSR|IY 0.070 .
PF3D7_1436700 321 RIYALYK|NE 0.062 .
PF3D7_1436700 341 LIQTITR|HE 0.085 .
PF3D7_1436700 357 LYEEEDK|EH 0.057 .
PF3D7_1436700 362 DKEHYNK|VD 0.057 .
PF3D7_1436700 365 HYNKVDK|EN 0.069 .
PF3D7_1436700 373 NDSSNIK|QL 0.065 .
PF3D7_1436700 404 SNNDIDK|NN 0.078 .
PF3D7_1436700 422 LYIQEIK|NI 0.062 .
PF3D7_1436700 426 EIKNINR|DN 0.099 .
PF3D7_1436700 433 DNYTLFK|NS 0.053 .
PF3D7_1436700 451 SFFLNSK|ST 0.077 .
PF3D7_1436700 455 NSKSTNK|NL 0.066 .
PF3D7_1436700 459 TNKNLFK|KK 0.070 .
PF3D7_1436700 460 NKNLFKK|KE 0.103 .
PF3D7_1436700 461 KNLFKKK|EN 0.127 .
PF3D7_1436700 472 IEINNDK|KK 0.066 .
PF3D7_1436700 473 EINNDKK|KS 0.100 .
PF3D7_1436700 474 INNDKKK|ST 0.451 .
PF3D7_1436700 478 KKKSTSK|ML 0.078 .
PF3D7_1436700 487 HMSQWDK|LF 0.064 .
PF3D7_1436700 495 FFYEDYK|TK 0.058 .
PF3D7_1436700 497 YEDYKTK|DI 0.074 .
PF3D7_1436700 500 YKTKDIK|NE 0.060 .
PF3D7_1436700 509 PFINMHK|NK 0.056 .
PF3D7_1436700 511 INMHKNK|NG 0.072 .
PF3D7_1436700 524 NNNNNNK|NK 0.064 .
PF3D7_1436700 526 NNNNKNK|NI 0.109 .
PF3D7_1436700 531 NKNIDNK|EN 0.071 .
PF3D7_1436700 538 ENLHIDK|YI 0.070 .
PF3D7_1436700 548 MYNDFIR|EN 0.099 .
PF3D7_1436700 559 YEFNYQK|MI 0.062 .
PF3D7_1436700 565 KMIDVFK|NI 0.075 .
PF3D7_1436700 575 IHLDNTK|IA 0.061 .
PF3D7_1436700 582 IAIYINK|KD 0.057 .
PF3D7_1436700 583 AIYINKK|DN 0.089 .
PF3D7_1436700 593 LSCNNNK|IC 0.058 .
PF3D7_1436700 596 NNNKICR|YR 0.103 .
PF3D7_1436700 598 NKICRYR|KK 0.081 .
PF3D7_1436700 599 KICRYRK|KL 0.166 .
PF3D7_1436700 600 ICRYRKK|LL 0.104 .
PF3D7_1436700 633 NSSNFNK|LQ 0.093 .
PF3D7_1436700 637 FNKLQNK|VL 0.061 .
PF3D7_1436700 643 KVLNLIK|NN 0.062 .
PF3D7_1436700 656 IDNFDSK|EI 0.069 .
PF3D7_1436700 659 FDSKEIK|SV 0.121 .
PF3D7_1436700 670 FLVHTDR|YY 0.086 .
PF3D7_1436700 673 HTDRYYK|ES 0.096 .
PF3D7_1436700 683 IYSITHR|II 0.118 .
PF3D7_1436700 696 NNLCDAK|TL 0.065 .
PF3D7_1436700 710 NLLPFTK|QT 0.064 .
PF3D7_1436700 715 TKQTIVK|KN 0.066 .
PF3D7_1436700 716 KQTIVKK|NR 0.079 .
PF3D7_1436700 718 TIVKKNR|FN 0.147 .
PF3D7_1436700 724 RFNHTIK|NV 0.072 .
PF3D7_1436700 738 LWLNNNK|NV 0.085 .
PF3D7_1436700 749 EQGQNNK|IL 0.059 .
PF3D7_1436700 757 LFYNNIK|VT 0.061 .
PF3D7_1436700 773 LSIYICK|NV 0.067 .
PF3D7_1436700 788 ILASLLR|SF 0.102 .
PF3D7_1436700 810 FIPLFLK|HI 0.055 .
PF3D7_1436700 813 LFLKHIK|YL 0.064 .
PF3D7_1436700 816 KHIKYLK|NV 0.077 .
PF3D7_1436700 829 ITQAYNR|QK 0.073 .
PF3D7_1436700 831 QAYNRQK|IN 0.070 .
PF3D7_1436700 835 RQKINNK|YF 0.066 .
PF3D7_1436700 843 FYYLLSK|QY 0.056 .
PF3D7_1436700 851 YQNANSK|DN 0.069 .
PF3D7_1436700 854 ANSKDNK|KS 0.082 .
PF3D7_1436700 855 NSKDNKK|SS 0.129 .
PF3D7_1436700 861 KSSVEVK|LI 0.102 .
____________________________^_________________
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Fasta :-
>PF3D7_1436700
ATGAATAACAAAATGTTAACAAGACGTATATTATTTTCAAGATATTTTCATGGACCAAGT
TTATATAAAAGATATATATTAATAAAAAATGATATACCAGAATTTATAAAAAGAGTAAAC
TTTAATTCTATGCAAAAGAATAACAATGATAAAGATGATAAAGTTAAAAATTTAAACATT
CAAAATAATAAAAATGAAGAATATGCTCATACTAAGGAAAATTGTGACAATATAAAGAGT
CCATTCTTTAATGATATCCTAAAAAAGCATGATAAAAAAAATCCTGATGTCATCCCAAAT
TTTATTATAGATTTTTTCACTAAGGAAAGTACTGATGATAAAAAAAATATATATATAAAC
GAATATAAGAATGTACTACTTGAATTTATACAATATAAGATTGAATTTTCAAAAGATGAT
TCTAATAAACATCAGATAAAATTTGTAGATATATTTTCTATGCTATATTTTTGTTATATG
GAAAGAATATACGATTTGGACTTTTTGACAGAACTCAGTAAGCAATTTGATAATATATAT
AAAAGTAAAAATACAAAAGATTTATTAAATAATATAAATATAAATTATTTAATGATGATG
TTTTATTATTTTTCTTTTTTAAAAGTGAGTAATGGAACATTAGATAATATCTTAAGAGAT
TTTATAATAAATAATGAAGAGGTAGAACCAGTACTAATTTACAAATATTTTGAATGTCTT
AGTTTACTTAGTGATGTACATGATAATAATAAAATTGTTCCTATCATAGAAATATTTATA
GAAAATTTTTATAATTTTAATAATTACATTTTGTTAAACATATTACAATTTTTACATAAA
ATGAATTTTTTTGATAAAAACATCTTTTCTCTTTTAACCAGAAAAATAAACAAAAATGTT
TATGAACAAAATGCAAATCTTTTTGAAGTATGTATGTTATCACGTATATATGCTTTATAT
AAAAATGAAAATATAACTTTTAATAATTATTTGCTTGATGATTTAATTCAAACCATTACT
AGGCATGAAGACAATTTTCAGAATGATGAATTATATGAAGAAGAGGATAAAGAACATTAC
AACAAAGTTGACAAAGAGAATGATTCTTCTAATATAAAACAATTAAATAATAATAATAAT
AATAATGATCATATAGAACAATTTAATAATCCTGATTCTATAAATATTAATAGTAATAAT
GATATAGATAAAAATAATGAAACGAATGATAATGATATACATAATTTATATATACAAGAA
ATTAAAAATATAAATAGAGATAATTACACACTATTTAAAAATAGTTTATATAATGATGGA
TTAAATTTTTATTCCTTCTTTTTAAATTCAAAATCAACTAATAAAAATTTATTCAAAAAG
AAAGAAAATATTCATATAGAAATTAATAATGATAAAAAAAAATCAACATCTAAAATGTTA
CATATGTCACAATGGGACAAATTATTTTTTTATGAAGATTATAAAACGAAAGATATAAAA
AATGAACCATTTATTAACATGCACAAGAACAAAAATGGTAATAATAATAATAATAATAAT
AATAATAATAAAAATAAAAATATTGACAATAAGGAAAATTTACATATTGATAAATATATT
AATATGTATAATGATTTTATAAGAGAAAATTTGTATTATGAATTTAACTACCAAAAAATG
ATTGATGTGTTTAAAAATATATGTATTCATTTGGATAATACAAAAATTGCAATATACATA
AATAAAAAGGATAACATGTTATCATGTAATAATAATAAAATATGTAGATATCGAAAGAAA
CTTTTATTTATAGATAATTATTATATTGGTCATATATTCTATATAATTGATTCTATGTTA
TCATTAAATATGCATCACAATTCTTCAAATTTTAATAAATTACAAAATAAAGTTCTTAAT
TTAATAAAAAATAATGAAACATATATAATTGATAATTTTGATAGTAAAGAAATTAAAAGT
GTATTAATATTTTTAGTACATACAGATCGATATTATAAGGAATCATTCATATATTCTATT
ACTCATAGAATTATCGACTTATATATTAATAACTTATGTGATGCGAAAACATTATCTATA
TATTTGTATAATCTTTTACCATTTACAAAACAAACAATTGTTAAAAAAAATAGATTTAAC
CATACTATTAAAAATGTTGTATACAATACTTATTTATGGTTAAATAATAATAAAAACGTA
TCTAATGAACAAGGACAAAATAATAAAATCCTATTTTATAATAATATAAAAGTAACAAAT
TACACACTTTTACAAATTTTATCTATATATATTTGTAAAAATGTTTACTTTATTAGCTTA
CCAATATTAGCATCCCTATTAAGATCATTTTCTTATTTATCATTTAATGACATTAATTTT
TATAATGTATTTATACCCTTATTCCTAAAGCATATTAAGTATTTAAAAAATGTGGATATT
CTGAACATAACACAAGCTTATAATAGGCAGAAAATTAATAATAAATACTTTTATTATTTG
TTATCAAAACAATACCAAAATGCTAATTCAAAAGACAATAAAAAATCTAGTGTTGAAGTT
AAGTTAATTGGATAG
- Download Fasta
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| ID | Site | Peptide | Score | Method |
| PF3D7_1436700 | 141 S | SKDDSNKHQ | 0.991 | unsp |