PF3D7_1457000 | signal peptide peptidase

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1457000OTHER0.9999780.0000020.000020
No Results

  • Fasta :-

    >PF3D7_1457000 MNLLKLIGKNKKMKNENMGNSIFYYSCYVIIVLTIILSKFVVIPLMAQMFLYTFITIYIG SHDSLKQLEIDDKTKKSDNITAYDAMMFPVIGSAALLTLYFAYKFLDPFYVNLLLTLYLT LAGVFSLQGVFTTILEPVFPNFFKKDEYVKTFKLPNFIYKEPIVFNTNKGEIVCLILSFA IGLRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSSDPVHYSMLGLGDIIIPGILMSLCLRFDYYLFKNNIHKGNLKKM FNDISIHESFKKYYFYTIIIFYELGLVVTYCMLFYFEHPQPALLYLVPACILAILACSIC KREFKLMIKYQEITDKSNTVDDASKNKKKDKEEIPKIQETPVSNAKKRITNK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1457000.fa Sequence name : PF3D7_1457000 Sequence length : 412 VALUES OF COMPUTED PARAMETERS Coef20 : 3.259 CoefTot : -2.320 ChDiff : 10 ZoneTo : 62 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.065 2.735 0.670 0.844 MesoH : 0.989 1.556 0.063 0.594 MuHd_075 : 33.447 26.880 10.312 7.300 MuHd_095 : 25.169 18.499 7.707 5.420 MuHd_100 : 23.270 16.910 6.712 4.675 MuHd_105 : 22.630 16.938 6.957 4.931 Hmax_075 : 12.600 28.350 1.736 8.040 Hmax_095 : -2.000 2.700 -2.586 2.120 Hmax_100 : -2.300 3.100 -2.958 1.820 Hmax_105 : 2.917 8.167 -1.893 3.127 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8838 0.1162 DFMC : 0.8485 0.1515
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 412 PF3D7_1457000 MNLLKLIGKNKKMKNENMGNSIFYYSCYVIIVLTIILSKFVVIPLMAQMFLYTFITIYIGSHDSLKQLEIDDKTKKSDNI 80 TAYDAMMFPVIGSAALLTLYFAYKFLDPFYVNLLLTLYLTLAGVFSLQGVFTTILEPVFPNFFKKDEYVKTFKLPNFIYK 160 EPIVFNTNKGEIVCLILSFAIGLRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVMVT 240 VAKSFEAPVKLLFPVSSDPVHYSMLGLGDIIIPGILMSLCLRFDYYLFKNNIHKGNLKKMFNDISIHESFKKYYFYTIII 320 FYELGLVVTYCMLFYFEHPQPALLYLVPACILAILACSICKREFKLMIKYQEITDKSNTVDDASKNKKKDKEEIPKIQET 400 PVSNAKKRITNK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1457000 5 --MNLLK|LI 0.073 . PF3D7_1457000 9 LLKLIGK|NK 0.061 . PF3D7_1457000 11 KLIGKNK|KM 0.062 . PF3D7_1457000 12 LIGKNKK|MK 0.103 . PF3D7_1457000 14 GKNKKMK|NE 0.083 . PF3D7_1457000 39 LTIILSK|FV 0.072 . PF3D7_1457000 66 GSHDSLK|QL 0.077 . PF3D7_1457000 73 QLEIDDK|TK 0.056 . PF3D7_1457000 75 EIDDKTK|KS 0.062 . PF3D7_1457000 76 IDDKTKK|SD 0.110 . PF3D7_1457000 104 TLYFAYK|FL 0.078 . PF3D7_1457000 144 VFPNFFK|KD 0.063 . PF3D7_1457000 145 FPNFFKK|DE 0.164 . PF3D7_1457000 150 KKDEYVK|TF 0.053 . PF3D7_1457000 153 EYVKTFK|LP 0.056 . PF3D7_1457000 160 LPNFIYK|EP 0.069 . PF3D7_1457000 169 IVFNTNK|GE 0.067 . PF3D7_1457000 184 SFAIGLR|WI 0.091 . PF3D7_1457000 189 LRWIFYK|DF 0.093 . PF3D7_1457000 243 VMVTVAK|SF 0.090 . PF3D7_1457000 250 SFEAPVK|LL 0.068 . PF3D7_1457000 282 LMSLCLR|FD 0.083 . PF3D7_1457000 289 FDYYLFK|NN 0.065 . PF3D7_1457000 294 FKNNIHK|GN 0.071 . PF3D7_1457000 298 IHKGNLK|KM 0.059 . PF3D7_1457000 299 HKGNLKK|MF 0.124 . PF3D7_1457000 311 SIHESFK|KY 0.064 . PF3D7_1457000 312 IHESFKK|YY 0.109 . PF3D7_1457000 361 LACSICK|RE 0.056 . PF3D7_1457000 362 ACSICKR|EF 0.168 . PF3D7_1457000 365 ICKREFK|LM 0.128 . PF3D7_1457000 369 EFKLMIK|YQ 0.060 . PF3D7_1457000 376 YQEITDK|SN 0.077 . PF3D7_1457000 385 TVDDASK|NK 0.056 . PF3D7_1457000 387 DDASKNK|KK 0.074 . PF3D7_1457000 388 DASKNKK|KD 0.114 . PF3D7_1457000 389 ASKNKKK|DK 0.213 . PF3D7_1457000 391 KNKKKDK|EE 0.078 . PF3D7_1457000 396 DKEEIPK|IQ 0.063 . PF3D7_1457000 406 TPVSNAK|KR 0.064 . PF3D7_1457000 407 PVSNAKK|RI 0.129 . PF3D7_1457000 408 VSNAKKR|IT 0.338 . PF3D7_1457000 412 KKRITNK|-- 0.074 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1457000 ATGAATTTATTAAAATTAATTGGAAAAAATAAGAAAATGAAGAATGAAAATATGGGTAAT TCCATATTTTATTATTCCTGTTATGTTATTATAGTTCTTACTATAATATTGTCTAAGTTT GTTGTAATCCCTTTGATGGCTCAAATGTTTTTGTACACATTCATTACAATATATATTGGA AGTCATGATAGTTTGAAACAATTAGAAATTGATGATAAAACCAAAAAGTCAGACAACATA ACAGCCTATGATGCTATGATGTTTCCAGTAATTGGATCTGCAGCTTTGCTTACTTTATAT TTCGCATATAAGTTCTTAGATCCGTTTTATGTGAATTTATTATTGACTCTTTACCTAACC TTGGCGGGTGTATTTTCCTTACAGGGTGTATTTACAACAATCTTGGAACCTGTTTTTCCA AATTTTTTTAAAAAAGATGAATATGTCAAAACATTCAAATTACCAAATTTTATATATAAA GAACCTATTGTATTCAATACTAATAAAGGAGAAATAGTTTGCTTAATACTCAGCTTTGCT ATAGGATTGCGTTGGATATTTTATAAAGACTTCATTACACATAACGTTTTGGCAGTTTCT TTTTGTTTTCAAGCCATATCTTTGGTAATTCTTAGCAACTTTTTAATAGGATTCTTATTA TTATCTGGTTTGTTTGTATATGATATTTTCTGGGTTTTTGGAAACGATGTTATGGTTACA GTAGCTAAGTCTTTTGAAGCTCCAGTAAAATTGTTATTCCCAGTTTCGAGTGATCCAGTA CATTACAGTATGCTTGGTTTAGGAGATATTATTATACCAGGAATATTGATGTCTTTATGT TTACGTTTTGATTATTATTTATTTAAGAATAACATACATAAAGGAAACTTAAAGAAAATG TTTAATGATATATCTATACATGAATCTTTCAAGAAATATTATTTTTATACCATTATAATA TTTTACGAATTAGGTTTAGTTGTTACATATTGTATGCTCTTTTATTTTGAACATCCTCAA CCAGCTCTTCTTTATTTGGTACCTGCATGTATACTTGCCATATTAGCTTGTTCCATATGC AAAAGAGAATTTAAATTAATGATAAAATATCAAGAAATTACAGACAAATCCAATACTGTA GATGATGCAAGTAAGAATAAAAAAAAAGATAAGGAAGAAATCCCCAAAATTCAAGAGACC CCAGTGTCAAATGCAAAAAAAAGAATTACCAATAAATGA
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  • Fasta :-

    MNLLKLIGKNKKMKNENMGNSIFYYSCYVIIVLTIILSKFVVIPLMAQMFLYTFITIYIG SHDSLKQLEIDDKTKKSDNITAYDAMMFPVIGSAALLTLYFAYKFLDPFYVNLLLTLYLT LAGVFSLQGVFTTILEPVFPNFFKKDEYVKTFKLPNFIYKEPIVFNTNKGEIVCLILSFA IGLRWIFYKDFITHNVLAVSFCFQAISLVILSNFLIGFLLLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSSDPVHYSMLGLGDIIIPGILMSLCLRFDYYLFKNNIHKGNLKKM FNDISIHESFKKYYFYTIIIFYELGLVVTYCMLFYFEHPQPALLYLVPACILAILACSIC KREFKLMIKYQEITDKSNTVDDASKNKKKDKEEIPKIQETPVSNAKKRITNK

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PF14_0543      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India