PF3D7_1460400 | ubiquitin carboxyl-terminal hydrolase isozyme L3

UniProt_ID: Q8IKM8

Computed_GO_Component_IDs: GO:0005622
Computed_GO_Components: intracellular
Computed_GO_Function_IDs: GO:0004843
Computed_GO_Functions: thiol-dependent ubiquitin-specific protease activity
Computed_GO_Process_IDs: GO:0006511
Computed_GO_Processes: ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs: GO:0000151
Curated_GO_Components: ubiquitin ligase complex
Curated_GO_Function_IDs: GO:0019784 GO:0043130
Curated_GO_Functions: NEDD8-specific protease activity ubiquitin binding
Curated_GO_Processes: protein deneddylation protein deubiquitination

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_1460400	OTHER	0.999982	0.000015	0.000003

No Results

Fasta :-
>PF3D7_1460400 MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVND NIVSENNTNDKHNLKENFDNVWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFF NKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILDVDTHFIVFVQIEGKIIELDG RKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1460400.fa Sequence name : PF3D7_1460400 Sequence length : 232 VALUES OF COMPUTED PARAMETERS Coef20 : 3.317 CoefTot : -0.106 ChDiff : -14 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.665 1.124 -0.022 0.516 MesoH : -1.117 -0.063 -0.591 0.157 MuHd_075 : 14.440 14.229 3.560 3.417 MuHd_095 : 21.120 17.976 6.554 5.243 MuHd_100 : 18.317 16.443 5.939 4.123 MuHd_105 : 14.116 12.230 4.206 2.753 Hmax_075 : 5.075 5.250 -1.363 3.036 Hmax_095 : 3.850 6.300 -0.693 3.448 Hmax_100 : 5.900 8.000 -0.074 3.380 Hmax_105 : 1.050 4.550 -1.679 2.485 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8642 0.1358 DFMC : 0.9237 0.0763

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 232 PF3D7_1460400 MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVNDNIVSENNTNDKHNLKENFDN 80 VWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFFNKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILD 160 VDTHFIVFVQIEGKIIELDGRKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII 240 ................................................................................ 80 ................................................................................ 160 ........................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1460400 3 ----MAK|ND 0.061 . PF3D7_1460400 23 LYLYSCK|LG 0.061 . PF3D7_1460400 28 CKLGQSK|LK 0.060 . PF3D7_1460400 30 LGQSKLK|FV 0.109 . PF3D7_1460400 71 ENNTNDK|HN 0.066 . PF3D7_1460400 75 NDKHNLK|EN 0.065 . PF3D7_1460400 85 DNVWFIK|QY 0.068 . PF3D7_1460400 105 HLYGNLR|NK 0.078 . PF3D7_1460400 107 YGNLRNK|FE 0.065 . PF3D7_1460400 112 NKFELDK|DS 0.058 . PF3D7_1460400 122 LDDFFNK|VN 0.060 . PF3D7_1460400 130 NEMSAEK|RG 0.053 . PF3D7_1460400 131 EMSAEKR|GQ 0.214 . PF3D7_1460400 136 KRGQELK|NN 0.072 . PF3D7_1460400 139 QELKNNK|SI 0.087 . PF3D7_1460400 155 CGQVENR|DD 0.112 . PF3D7_1460400 174 FVQIEGK|II 0.062 . PF3D7_1460400 181 IIELDGR|KD 0.085 . PF3D7_1460400 182 IELDGRK|DH 0.071 . PF3D7_1460400 202 FLYDTGK|II 0.070 . PF3D7_1460400 207 GKIIQDK|FI 0.095 . PF3D7_1460400 211 QDKFIEK|CK 0.066 . PF3D7_1460400 213 KFIEKCK|DD 0.060 . PF3D7_1460400 217 KCKDDLR|FS 0.071 . ____________________________^_________________

Fasta :-
>PF3D7_1460400 ATGGCAAAGAATGATATTTGGACACCTTTAGAGTCCAATCCCGATTCTTTATATTTATAT TCTTGTAAACTTGGACAGTCAAAATTAAAATTTGTGGACATCTATGGTTTTAATAATGAT TTATTGGATATGATTCCACAACCTGTTCAAGCGGTTATATTTTTATATCCTGTAAATGAT AATATAGTTTCTGAAAACAATACCAATGATAAGCACAATTTGAAAGAAAATTTTGATAAC GTCTGGTTTATAAAACAATACATTCCAAACTCATGTGGAACCATAGCCTTGTTACATTTA TACGGAAATTTAAGGAATAAATTCGAACTAGATAAGGATTCTGTTTTGGATGATTTCTTT AATAAAGTTAATGAGATGTCTGCCGAAAAAAGAGGACAGGAGTTGAAAAATAACAAAAGT ATTGAAAATTTACATCACGAGTTTTGTGGACAAGTCGAGAATAGGGACGATATTTTAGAC GTTGATACACATTTTATTGTTTTTGTGCAAATTGAAGGAAAGATCATTGAATTGGATGGA AGAAAGGATCATCCTACTGTTCACTGTTTTACCAATGGAGATAATTTTTTATATGATACG GGGAAAATCATACAAGATAAGTTTATTGAAAAATGTAAAGATGATTTAAGATTTTCAGCA TTGGCCGTAATACCAAACGATAACTTTGATATTATATGA
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Fasta :-

MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVND NIVSENNTNDKHNLKENFDNVWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFF NKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILDVDTHFIVFVQIEGKIIELDG RKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII