PF3D7_1474800 | proteasome subunit alpha type-1, putative

UniProt_ID: Q8IK90

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs: GO:0005634 GO:0005839
Curated_GO_Components: nucleus proteasome core complex
Curated_GO_Function_IDs: GO:0004175
Curated_GO_Functions: endopeptidase activity
Curated_GO_Processes: ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_1474800	OTHER	0.999945	0.000027	0.000028

No Results

Fasta :-
>PF3D7_1474800 MYRNLYDTDNIIYSPEGRLYQVEYASEAIKQGTCAVAIKSKDYVVVSGLKKCISKLSFPQ EKIFKIDDYIGISMSGITSDAKVLTKFMQNECLSHKFLYNENINIESLVRSVADKYQKNT QKSSKRAFGVGLMIAAYHNEPCIFETRPNGSYFEYDALSFGARSHASKTYLEKNLHLFEE CSLEELILHCLKALKCSLSSESELTISNTALAVVGKNHPWQEISSLQLEEYLSKVKMDAE QEQVEENVQNEANE
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1474800.fa Sequence name : PF3D7_1474800 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 3.351 CoefTot : -0.191 ChDiff : -7 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.747 0.982 -0.031 0.529 MesoH : -0.956 0.158 -0.467 0.131 MuHd_075 : 25.902 13.951 5.146 6.804 MuHd_095 : 26.535 15.461 5.371 6.772 MuHd_100 : 26.539 17.309 5.804 6.751 MuHd_105 : 23.751 16.944 5.783 5.088 Hmax_075 : 4.200 4.433 -1.277 3.197 Hmax_095 : -2.400 1.600 -2.886 2.188 Hmax_100 : 8.600 8.900 0.179 3.830 Hmax_105 : 0.400 3.100 -1.493 2.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5128 0.4872 DFMC : 0.6221 0.3779

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 PF3D7_1474800 MYRNLYDTDNIIYSPEGRLYQVEYASEAIKQGTCAVAIKSKDYVVVSGLKKCISKLSFPQEKIFKIDDYIGISMSGITSD 80 AKVLTKFMQNECLSHKFLYNENINIESLVRSVADKYQKNTQKSSKRAFGVGLMIAAYHNEPCIFETRPNGSYFEYDALSF 160 GARSHASKTYLEKNLHLFEECSLEELILHCLKALKCSLSSESELTISNTALAVVGKNHPWQEISSLQLEEYLSKVKMDAE 240 QEQVEENVQNEANE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1474800 3 ----MYR|NL 0.090 . PF3D7_1474800 18 IYSPEGR|LY 0.092 . PF3D7_1474800 30 YASEAIK|QG 0.066 . PF3D7_1474800 39 TCAVAIK|SK 0.104 . PF3D7_1474800 41 AVAIKSK|DY 0.070 . PF3D7_1474800 50 VVVSGLK|KC 0.053 . PF3D7_1474800 51 VVSGLKK|CI 0.106 . PF3D7_1474800 55 LKKCISK|LS 0.074 . PF3D7_1474800 62 LSFPQEK|IF 0.060 . PF3D7_1474800 65 PQEKIFK|ID 0.066 . PF3D7_1474800 82 GITSDAK|VL 0.060 . PF3D7_1474800 86 DAKVLTK|FM 0.064 . PF3D7_1474800 96 NECLSHK|FL 0.067 . PF3D7_1474800 110 NIESLVR|SV 0.135 . PF3D7_1474800 115 VRSVADK|YQ 0.082 . PF3D7_1474800 118 VADKYQK|NT 0.058 . PF3D7_1474800 122 YQKNTQK|SS 0.085 . PF3D7_1474800 125 NTQKSSK|RA 0.088 . PF3D7_1474800 126 TQKSSKR|AF 0.361 . PF3D7_1474800 147 PCIFETR|PN 0.089 . PF3D7_1474800 163 ALSFGAR|SH 0.133 . PF3D7_1474800 168 ARSHASK|TY 0.080 . PF3D7_1474800 173 SKTYLEK|NL 0.066 . PF3D7_1474800 192 LILHCLK|AL 0.061 . PF3D7_1474800 195 HCLKALK|CS 0.057 . PF3D7_1474800 216 ALAVVGK|NH 0.074 . PF3D7_1474800 234 LEEYLSK|VK 0.065 . PF3D7_1474800 236 EYLSKVK|MD 0.059 . ____________________________^_________________

Fasta :-
>PF3D7_1474800 ATGTATCGAAATTTATATGATACAGACAATATAATTTACTCTCCAGAAGGAAGATTGTAC CAAGTAGAATATGCAAGTGAAGCAATAAAACAAGGAACATGTGCAGTAGCTATAAAGTCA AAGGATTATGTGGTTGTGAGTGGATTAAAGAAATGCATTAGTAAATTATCTTTTCCTCAA GAGAAGATATTTAAAATTGATGATTATATTGGTATTAGTATGAGTGGAATTACTTCTGAT GCTAAGGTTTTAACAAAATTTATGCAGAATGAATGTTTATCTCATAAATTTTTATATAAT GAAAATATAAATATTGAATCCTTAGTAAGAAGTGTAGCAGATAAATATCAGAAGAATACA CAAAAAAGTAGTAAGAGAGCATTTGGAGTAGGGTTAATGATAGCTGCTTATCATAATGAA CCATGTATATTTGAAACAAGACCAAATGGATCTTATTTTGAATATGATGCCTTATCATTC GGTGCAAGATCTCATGCTTCAAAAACATATTTAGAAAAAAATCTTCATTTATTTGAAGAA TGTTCTTTAGAAGAATTAATATTACATTGTTTAAAAGCCTTAAAATGTTCCCTTTCAAGT GAATCTGAGTTAACCATATCTAATACAGCTTTAGCTGTTGTGGGAAAAAATCACCCTTGG CAAGAAATTTCTTCTCTACAATTAGAGGAATATCTATCAAAAGTTAAAATGGACGCTGAA CAGGAACAAGTTGAAGAAAATGTACAGAATGAAGCAAACGAATAA
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Fasta :-

MYRNLYDTDNIIYSPEGRLYQVEYASEAIKQGTCAVAIKSKDYVVVSGLKKCISKLSFPQ EKIFKIDDYIGISMSGITSDAKVLTKFMQNECLSHKFLYNENINIESLVRSVADKYQKNT QKSSKRAFGVGLMIAAYHNEPCIFETRPNGSYFEYDALSFGARSHASKTYLEKNLHLFEE CSLEELILHCLKALKCSLSSESELTISNTALAVVGKNHPWQEISSLQLEEYLSKVKMDAE QEQVEENVQNEANE