PKNH_0108300 | lysophospholipase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0108300OTHER0.9999250.0000010.000074
No Results

  • Fasta :-

    >PKNH_0108300 MAEATNRGSNRGSHNRPGNRANNRGGNRAANRGANHSANRMANGVEKVTEKEIEKKNSSI ESAKKISNETEKATSQPAKETPNKLADKVAKETPNKLADKVAKEPPKEDEKKAADDSSKG TQNDILKTGSFKSRDGLELMTYEWVVDKPIGIIILVHALNSHVRFEYLKHNVIIESKEKA ILKDADNYYIYKDSWIEHFNKNGYSVYGLDMRGHGQSGCVKNVKTHINNFQDIINDVVQY ANIVYDSLCGQGEKKKERKKKTEGGGGVDKSIDVESSLTSTSDNDQTLQGTHITPGNSPS STEQTPNGANNIRKNDIPPFYFMGLSMGGNIVLRILELRDKKGDESIKRLNIKGVISLAG MISLDDLKKKPEYKYFYIPIAKIASALLPTMRLSPSLKFEMFPYINDLFSFDPHCYHKAI TNRFGNEILKAVDTLHKDMKFIPEDVHILVVHSVLDSACSYTGVSKFFNALKTKNKELFT LEDMDHILPLEPGNEKILKKVMDWLSHLQCVKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0108300.fa Sequence name : PKNH_0108300 Sequence length : 513 VALUES OF COMPUTED PARAMETERS Coef20 : 3.680 CoefTot : -1.644 ChDiff : 10 ZoneTo : 45 KR : 8 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.359 0.125 0.633 MesoH : -0.784 0.234 -0.475 0.196 MuHd_075 : 46.982 18.899 11.521 9.456 MuHd_095 : 60.531 33.107 15.299 13.203 MuHd_100 : 46.031 26.359 12.582 9.604 MuHd_105 : 28.829 14.152 7.615 5.937 Hmax_075 : 5.833 3.850 0.206 2.333 Hmax_095 : 10.850 12.500 1.229 2.625 Hmax_100 : 12.400 10.300 1.699 3.900 Hmax_105 : -2.000 5.000 -4.073 0.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0579 0.9421 DFMC : 0.0530 0.9470 This protein is probably imported in mitochondria. f(Ser) = 0.0667 f(Arg) = 0.1778 CMi = 0.20906 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 513 PKNH_0108300 MAEATNRGSNRGSHNRPGNRANNRGGNRAANRGANHSANRMANGVEKVTEKEIEKKNSSIESAKKISNETEKATSQPAKE 80 TPNKLADKVAKETPNKLADKVAKEPPKEDEKKAADDSSKGTQNDILKTGSFKSRDGLELMTYEWVVDKPIGIIILVHALN 160 SHVRFEYLKHNVIIESKEKAILKDADNYYIYKDSWIEHFNKNGYSVYGLDMRGHGQSGCVKNVKTHINNFQDIINDVVQY 240 ANIVYDSLCGQGEKKKERKKKTEGGGGVDKSIDVESSLTSTSDNDQTLQGTHITPGNSPSSTEQTPNGANNIRKNDIPPF 320 YFMGLSMGGNIVLRILELRDKKGDESIKRLNIKGVISLAGMISLDDLKKKPEYKYFYIPIAKIASALLPTMRLSPSLKFE 400 MFPYINDLFSFDPHCYHKAITNRFGNEILKAVDTLHKDMKFIPEDVHILVVHSVLDSACSYTGVSKFFNALKTKNKELFT 480 LEDMDHILPLEPGNEKILKKVMDWLSHLQCVKA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................P........................................................... 320 ................................................................................ 400 ................................................................................ 480 ................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0108300 7 MAEATNR|GS 0.092 . PKNH_0108300 11 TNRGSNR|GS 0.129 . PKNH_0108300 16 NRGSHNR|PG 0.096 . PKNH_0108300 20 HNRPGNR|AN 0.108 . PKNH_0108300 24 GNRANNR|GG 0.101 . PKNH_0108300 28 NNRGGNR|AA 0.114 . PKNH_0108300 32 GNRAANR|GA 0.149 . PKNH_0108300 40 ANHSANR|MA 0.158 . PKNH_0108300 47 MANGVEK|VT 0.079 . PKNH_0108300 51 VEKVTEK|EI 0.075 . PKNH_0108300 55 TEKEIEK|KN 0.067 . PKNH_0108300 56 EKEIEKK|NS 0.095 . PKNH_0108300 64 SSIESAK|KI 0.079 . PKNH_0108300 65 SIESAKK|IS 0.097 . PKNH_0108300 72 ISNETEK|AT 0.081 . PKNH_0108300 79 ATSQPAK|ET 0.092 . PKNH_0108300 84 AKETPNK|LA 0.077 . PKNH_0108300 88 PNKLADK|VA 0.061 . PKNH_0108300 91 LADKVAK|ET 0.077 . PKNH_0108300 96 AKETPNK|LA 0.071 . PKNH_0108300 100 PNKLADK|VA 0.059 . PKNH_0108300 103 LADKVAK|EP 0.067 . PKNH_0108300 107 VAKEPPK|ED 0.066 . PKNH_0108300 111 PPKEDEK|KA 0.059 . PKNH_0108300 112 PKEDEKK|AA 0.170 . PKNH_0108300 119 AADDSSK|GT 0.064 . PKNH_0108300 127 TQNDILK|TG 0.063 . PKNH_0108300 132 LKTGSFK|SR 0.087 . PKNH_0108300 134 TGSFKSR|DG 0.137 . PKNH_0108300 148 YEWVVDK|PI 0.081 . PKNH_0108300 164 ALNSHVR|FE 0.098 . PKNH_0108300 169 VRFEYLK|HN 0.066 . PKNH_0108300 177 NVIIESK|EK 0.055 . PKNH_0108300 179 IIESKEK|AI 0.062 . PKNH_0108300 183 KEKAILK|DA 0.077 . PKNH_0108300 192 DNYYIYK|DS 0.072 . PKNH_0108300 201 WIEHFNK|NG 0.060 . PKNH_0108300 212 VYGLDMR|GH 0.106 . PKNH_0108300 221 GQSGCVK|NV 0.091 . PKNH_0108300 224 GCVKNVK|TH 0.061 . PKNH_0108300 254 LCGQGEK|KK 0.061 . PKNH_0108300 255 CGQGEKK|KE 0.091 . PKNH_0108300 256 GQGEKKK|ER 0.105 . PKNH_0108300 258 GEKKKER|KK 0.116 . PKNH_0108300 259 EKKKERK|KK 0.115 . PKNH_0108300 260 KKKERKK|KT 0.147 . PKNH_0108300 261 KKERKKK|TE 0.622 *ProP* PKNH_0108300 270 GGGGVDK|SI 0.087 . PKNH_0108300 313 NGANNIR|KN 0.088 . PKNH_0108300 314 GANNIRK|ND 0.091 . PKNH_0108300 334 GGNIVLR|IL 0.086 . PKNH_0108300 339 LRILELR|DK 0.107 . PKNH_0108300 341 ILELRDK|KG 0.059 . PKNH_0108300 342 LELRDKK|GD 0.198 . PKNH_0108300 348 KGDESIK|RL 0.063 . PKNH_0108300 349 GDESIKR|LN 0.174 . PKNH_0108300 353 IKRLNIK|GV 0.092 . PKNH_0108300 368 ISLDDLK|KK 0.052 . PKNH_0108300 369 SLDDLKK|KP 0.084 . PKNH_0108300 370 LDDLKKK|PE 0.105 . PKNH_0108300 374 KKKPEYK|YF 0.068 . PKNH_0108300 382 FYIPIAK|IA 0.084 . PKNH_0108300 392 ALLPTMR|LS 0.069 . PKNH_0108300 398 RLSPSLK|FE 0.063 . PKNH_0108300 418 DPHCYHK|AI 0.073 . PKNH_0108300 423 HKAITNR|FG 0.135 . PKNH_0108300 430 FGNEILK|AV 0.079 . PKNH_0108300 437 AVDTLHK|DM 0.061 . PKNH_0108300 440 TLHKDMK|FI 0.088 . PKNH_0108300 466 SYTGVSK|FF 0.062 . PKNH_0108300 472 KFFNALK|TK 0.068 . PKNH_0108300 474 FNALKTK|NK 0.062 . PKNH_0108300 476 ALKTKNK|EL 0.078 . PKNH_0108300 496 LEPGNEK|IL 0.062 . PKNH_0108300 499 GNEKILK|KV 0.101 . PKNH_0108300 500 NEKILKK|VM 0.086 . PKNH_0108300 512 SHLQCVK|A- 0.061 . ____________________________^_________________

  • Fasta :-

    >PKNH_0108300 ATGGCAGAGGCCACAAACAGAGGATCCAATAGGGGGTCCCATAATAGGCCCGGAAATAGG GCAAACAACAGGGGAGGGAATAGGGCGGCCAACCGAGGCGCCAACCATTCAGCAAATCGG ATGGCAAACGGGGTAGAGAAGGTGACAGAAAAAGAGATTGAGAAGAAGAATTCCTCAATT GAATCCGCTAAAAAAATATCAAATGAGACCGAAAAGGCCACAAGTCAACCAGCAAAAGAA ACGCCTAATAAATTAGCCGATAAAGTGGCAAAAGAGACGCCTAATAAGTTAGCCGATAAA GTGGCAAAAGAGCCCCCTAAGGAGGATGAAAAGAAGGCTGCGGATGATAGTAGTAAAGGA ACCCAGAACGATATCCTCAAGACAGGATCCTTCAAAAGTCGAGATGGACTAGAGCTGATG ACATACGAGTGGGTTGTGGACAAGCCCATTGGTATCATAATACTAGTTCATGCTCTAAAC TCCCATGTGAGATTTGAATACCTAAAGCATAATGTCATAATAGAGAGCAAGGAGAAAGCT ATTCTGAAGGATGCAGATAATTACTACATTTACAAAGACAGTTGGATTGAGCATTTCAAC AAAAATGGTTATTCAGTCTACGGGTTAGATATGAGAGGCCATGGACAGTCAGGGTGTGTC AAAAATGTGAAGACTCACATAAATAATTTTCAAGATATAATTAACGATGTGGTGCAGTAT GCTAACATTGTATACGACTCATTATGCGGACAAGGGGAAAAGAAAAAAGAAAGAAAAAAA AAAACAGAAGGTGGTGGGGGTGTTGACAAGTCTATTGATGTGGAATCCTCCCTTACGTCA ACCTCCGATAATGACCAAACATTACAAGGAACTCATATCACGCCTGGCAATTCTCCATCC AGTACGGAACAAACCCCCAATGGTGCCAACAATATCAGAAAAAATGACATTCCTCCATTC TACTTCATGGGTCTTTCCATGGGAGGAAATATCGTTTTAAGAATTTTAGAATTGAGAGAT AAAAAAGGAGATGAATCTATTAAGCGTTTAAACATAAAGGGAGTGATTAGTCTAGCGGGT ATGATTTCTTTAGATGACCTCAAGAAGAAGCCAGAATATAAATACTTTTACATACCTATA GCGAAAATTGCATCTGCTCTTCTTCCAACCATGAGATTGAGCCCTTCTTTGAAGTTTGAA ATGTTTCCTTACATTAATGATCTCTTCAGTTTCGACCCCCACTGTTACCATAAAGCCATA ACGAACCGTTTCGGGAATGAAATTTTAAAGGCAGTAGATACCTTACACAAGGATATGAAA TTCATTCCGGAAGATGTACATATATTGGTTGTGCACTCTGTACTGGATAGCGCTTGTTCG TACACTGGGGTGTCGAAATTTTTTAATGCTCTTAAAACGAAGAACAAGGAGTTGTTCACC CTTGAGGACATGGACCATATTCTACCACTGGAACCCGGCAATGAAAAAATTCTGAAAAAG GTTATGGACTGGCTTTCTCACCTGCAGTGCGTCAAAGCATAA
  • Download Fasta

  • Fasta :-

    MAEATNRGSNRGSHNRPGNRANNRGGNRAANRGANHSANRMANGVEKVTEKEIEKKNSSI ESAKKISNETEKATSQPAKETPNKLADKVAKETPNKLADKVAKEPPKEDEKKAADDSSKG TQNDILKTGSFKSRDGLELMTYEWVVDKPIGIIILVHALNSHVRFEYLKHNVIIESKEKA ILKDADNYYIYKDSWIEHFNKNGYSVYGLDMRGHGQSGCVKNVKTHINNFQDIINDVVQY ANIVYDSLCGQGEKKKERKKKTEGGGGVDKSIDVESSLTSTSDNDQTLQGTHITPGNSPS STEQTPNGANNIRKNDIPPFYFMGLSMGGNIVLRILELRDKKGDESIKRLNIKGVISLAG MISLDDLKKKPEYKYFYIPIAKIASALLPTMRLSPSLKFEMFPYINDLFSFDPHCYHKAI TNRFGNEILKAVDTLHKDMKFIPEDVHILVVHSVLDSACSYTGVSKFFNALKTKNKELFT LEDMDHILPLEPGNEKILKKVMDWLSHLQCVKA

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0108300280 SSSLTSTSDN0.997unspPKNH_0108300280 SSSLTSTSDN0.997unspPKNH_0108300280 SSSLTSTSDN0.997unspPKNH_0108300298 STPGNSPSST0.995unspPKNH_0108300301 SNSPSSTEQT0.997unspPKNH_0108300346 SKGDESIKRL0.992unspPKNH_010830058 SEKKNSSIES0.995unspPKNH_010830059 SKKNSSIESA0.995unsp

PK7_0670c      PKH_010780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India