PKNH_0108400 | prodrug activation and resistance esterase, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0108400OTHER0.9999250.0000120.000063
No Results

  • Fasta :-

    >PKNH_0108400 MAETQTAERDYRRGRAAGGSSSTSPKGSGGSARLDGKPKVDSFHNRDGLTLKTYSWQVKN PIGVIFLVHGLNTHVRLEYMRHNVDIVSSEKAILKDADNYYIYKDSWIEHFNKNGYSVYG MDHQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDVICLRGQKDAMNAETSKSGSAD SPTSGTSPSSPMSAASPASFAQRNNNSWSIHNNLKNTKTPPFYIMGLSMGGNIVLRTLEI LGKSKDHSAKLNIRGCICLAGMISIDELASKASYKYFYIPCGKFFATVFPTLRLTPSLYF KKYPYVNQIFKYDKNRNKRPITCKLGFELLNAIENLNKDIHHIPKDIPILFVHSRHDSAC FFGGAETFYKKINTNLKELHVLDDMDHVLTMEPGNERVLEKVLAWLSSLSRSDASGS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0108400.fa Sequence name : PKNH_0108400 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 3.925 CoefTot : 0.141 ChDiff : 13 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.353 0.125 0.559 MesoH : -0.321 0.468 -0.267 0.237 MuHd_075 : 23.544 13.817 5.105 4.715 MuHd_095 : 13.749 4.344 3.827 4.575 MuHd_100 : 18.550 5.668 4.596 5.498 MuHd_105 : 27.226 9.100 5.892 6.766 Hmax_075 : -1.750 2.275 -1.762 0.726 Hmax_095 : -8.225 -2.713 -3.244 0.989 Hmax_100 : -11.000 -4.900 -3.974 0.820 Hmax_105 : 9.100 2.700 0.521 3.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8091 0.1909 DFMC : 0.8431 0.1569
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 PKNH_0108400 MAETQTAERDYRRGRAAGGSSSTSPKGSGGSARLDGKPKVDSFHNRDGLTLKTYSWQVKNPIGVIFLVHGLNTHVRLEYM 80 RHNVDIVSSEKAILKDADNYYIYKDSWIEHFNKNGYSVYGMDHQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDVI 160 CLRGQKDAMNAETSKSGSADSPTSGTSPSSPMSAASPASFAQRNNNSWSIHNNLKNTKTPPFYIMGLSMGGNIVLRTLEI 240 LGKSKDHSAKLNIRGCICLAGMISIDELASKASYKYFYIPCGKFFATVFPTLRLTPSLYFKKYPYVNQIFKYDKNRNKRP 320 ITCKLGFELLNAIENLNKDIHHIPKDIPILFVHSRHDSACFFGGAETFYKKINTNLKELHVLDDMDHVLTMEPGNERVLE 400 KVLAWLSSLSRSDASGS 480 ..............P................................................................. 80 ................................................................................ 160 ................................................................................ 240 ..............................................................................P. 320 ................................................................................ 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PKNH_0108400 9 ETQTAER|DY 0.102 . PKNH_0108400 12 TAERDYR|RG 0.251 . PKNH_0108400 13 AERDYRR|GR 0.170 . PKNH_0108400 15 RDYRRGR|AA 0.532 *ProP* PKNH_0108400 26 SSSTSPK|GS 0.118 . PKNH_0108400 33 GSGGSAR|LD 0.139 . PKNH_0108400 37 SARLDGK|PK 0.067 . PKNH_0108400 39 RLDGKPK|VD 0.067 . PKNH_0108400 46 VDSFHNR|DG 0.128 . PKNH_0108400 52 RDGLTLK|TY 0.071 . PKNH_0108400 59 TYSWQVK|NP 0.079 . PKNH_0108400 76 GLNTHVR|LE 0.083 . PKNH_0108400 81 VRLEYMR|HN 0.098 . PKNH_0108400 91 DIVSSEK|AI 0.058 . PKNH_0108400 95 SEKAILK|DA 0.075 . PKNH_0108400 104 DNYYIYK|DS 0.072 . PKNH_0108400 113 WIEHFNK|NG 0.063 . PKNH_0108400 133 GQSDGWR|NL 0.108 . PKNH_0108400 136 DGWRNLK|TN 0.107 . PKNH_0108400 140 NLKTNVK|KF 0.061 . PKNH_0108400 141 LKTNVKK|FD 0.122 . PKNH_0108400 155 LIQYINR|VH 0.074 . PKNH_0108400 163 HDVICLR|GQ 0.096 . PKNH_0108400 166 ICLRGQK|DA 0.175 . PKNH_0108400 175 MNAETSK|SG 0.087 . PKNH_0108400 203 PASFAQR|NN 0.088 . PKNH_0108400 215 SIHNNLK|NT 0.062 . PKNH_0108400 218 NNLKNTK|TP 0.058 . PKNH_0108400 236 GGNIVLR|TL 0.114 . PKNH_0108400 243 TLEILGK|SK 0.085 . PKNH_0108400 245 EILGKSK|DH 0.076 . PKNH_0108400 250 SKDHSAK|LN 0.073 . PKNH_0108400 254 SAKLNIR|GC 0.089 . PKNH_0108400 271 IDELASK|AS 0.065 . PKNH_0108400 275 ASKASYK|YF 0.070 . PKNH_0108400 283 FYIPCGK|FF 0.072 . PKNH_0108400 293 TVFPTLR|LT 0.066 . PKNH_0108400 301 TPSLYFK|KY 0.071 . PKNH_0108400 302 PSLYFKK|YP 0.091 . PKNH_0108400 311 YVNQIFK|YD 0.059 . PKNH_0108400 314 QIFKYDK|NR 0.057 . PKNH_0108400 316 FKYDKNR|NK 0.098 . PKNH_0108400 318 YDKNRNK|RP 0.061 . PKNH_0108400 319 DKNRNKR|PI 0.696 *ProP* PKNH_0108400 324 KRPITCK|LG 0.068 . PKNH_0108400 338 AIENLNK|DI 0.082 . PKNH_0108400 345 DIHHIPK|DI 0.086 . PKNH_0108400 355 ILFVHSR|HD 0.136 . PKNH_0108400 370 GAETFYK|KI 0.074 . PKNH_0108400 371 AETFYKK|IN 0.075 . PKNH_0108400 377 KINTNLK|EL 0.068 . PKNH_0108400 397 MEPGNER|VL 0.098 . PKNH_0108400 401 NERVLEK|VL 0.059 . PKNH_0108400 411 WLSSLSR|SD 0.105 . ____________________________^_________________

  • Fasta :-

    >PKNH_0108400 ATGGCCGAGACACAGACCGCGGAACGCGACTACAGGCGAGGCCGTGCGGCCGGGGGATCT AGCTCCACAAGCCCAAAAGGCTCTGGCGGTAGTGCCCGTTTGGATGGAAAACCCAAAGTA GATTCATTCCATAATAGAGATGGACTGACATTGAAGACATACTCCTGGCAAGTAAAGAAC CCAATAGGAGTGATATTCCTAGTCCATGGACTCAACACACATGTACGGTTAGAGTACATG CGACACAACGTAGATATAGTGAGCTCAGAAAAAGCTATTCTGAAGGATGCAGATAATTAC TACATTTACAAAGACAGTTGGATTGAGCATTTCAACAAAAATGGCTACTCCGTATATGGC ATGGACCACCAGGGACATGGGCAATCTGACGGTTGGAGGAATTTAAAAACAAACGTGAAA AAGTTTGATGATCTGGTATATGATCTGATACAGTACATTAATAGGGTGCACGACGTTATC TGTCTACGGGGTCAGAAGGATGCAATGAATGCAGAAACGAGTAAGAGCGGTTCGGCGGAT TCCCCCACTTCCGGCACTTCTCCTTCATCCCCCATGTCTGCTGCTTCGCCTGCTTCTTTC GCGCAGAGGAACAACAACTCATGGTCCATTCACAACAACCTGAAAAACACCAAGACGCCT CCCTTCTACATTATGGGTCTCTCCATGGGTGGAAACATAGTACTAAGGACATTAGAAATT TTGGGCAAATCCAAAGATCATAGTGCCAAACTAAACATAAGAGGATGTATATGTTTAGCC GGCATGATATCCATAGACGAATTAGCCTCCAAAGCATCTTACAAATATTTCTACATACCT TGTGGAAAATTTTTTGCCACCGTATTTCCAACCCTAAGACTCACGCCATCCTTGTACTTT AAGAAGTATCCATACGTTAATCAAATTTTTAAGTACGATAAAAATAGAAATAAAAGACCA ATAACGTGCAAGTTGGGCTTTGAGCTTCTGAACGCCATTGAAAATTTAAATAAGGACATT CATCATATTCCAAAGGATATCCCCATCCTTTTCGTCCACTCAAGACATGACAGTGCTTGC TTCTTTGGGGGTGCGGAAACCTTTTATAAAAAAATTAATACCAACCTTAAGGAGTTACAC GTACTTGACGATATGGACCATGTCCTCACCATGGAACCGGGCAATGAGCGCGTTCTAGAG AAGGTCCTTGCGTGGTTGTCTTCCCTCTCCCGATCGGATGCAAGCGGCAGCTAG
  • Download Fasta

  • Fasta :-

    MAETQTAERDYRRGRAAGGSSSTSPKGSGGSARLDGKPKVDSFHNRDGLTLKTYSWQVKN PIGVIFLVHGLNTHVRLEYMRHNVDIVSSEKAILKDADNYYIYKDSWIEHFNKNGYSVYG MDHQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDVICLRGQKDAMNAETSKSGSAD SPTSGTSPSSPMSAASPASFAQRNNNSWSIHNNLKNTKTPPFYIMGLSMGGNIVLRTLEI LGKSKDHSAKLNIRGCICLAGMISIDELASKASYKYFYIPCGKFFATVFPTLRLTPSLYF KKYPYVNQIFKYDKNRNKRPITCKLGFELLNAIENLNKDIHHIPKDIPILFVHSRHDSAC FFGGAETFYKKINTNLKELHVLDDMDHVLTMEPGNERVLEKVLAWLSSLSRSDASGS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0108400190 STSPSSPMSA0.993unspPKNH_0108400190 STSPSSPMSA0.993unspPKNH_0108400190 STSPSSPMSA0.993unspPKNH_0108400248 SSKDHSAKLN0.993unspPKNH_0108400354 SLFVHSRHDS0.994unspPKNH_010840024 SSSSTSPKGS0.998unspPKNH_0108400181 SGSADSPTSG0.993unsp

PK7_0680c      PKH_010790      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India