PKNH_0110500 | plasmepsin X, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0110500SP0.0149890.9849600.000051CS pos: 26-27. ARC-HK. Pr: 0.9011
No Results

  • Fasta :-

    >PKNH_0110500 MKDTKVLRTLLCGALFLLHLCQDARCHKVYKVGPEPIPCSQCKDLRECSACLFEEEESPY AIHLKLNKNKPNDHSNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPLGNTMDDIDSINEE IQNRRKESAGGGRNFIEMSNYKKDSLSDYFSGVQKHAHSEVGRVNMGDEKGRRENEGGEG GEGHASEHADRVERNFIDLKNTNAVVEQTEENVFLIPLKHLRDSQFVGKLLVGVPPQEIH PIFDTGSTNLWVVTTDCEEKSCKKVQRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGK ETFVLGNHTVRNQTFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNL LKQNKNLSPQFSFYISPDDNTSTFIIGGLSKSFYQGSIYMLPVIKEYYWEVELDGIYVGE KKICCEEKSYAIFDTGTSYNTMPSAQIKNFFDVVPSVACTEENYQDVLKNYPIIKYVFGD LIIELMPEEYMILNEDNCIPAYMQIDVPSEKNHAYLLGSLAFMRHYYTVFVRGVNGKPSM VGVAKAKSAASAVN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0110500.fa Sequence name : PKNH_0110500 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.390 CoefTot : 0.022 ChDiff : -11 ZoneTo : 22 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.653 0.160 0.520 MesoH : -0.341 0.236 -0.371 0.255 MuHd_075 : 23.519 22.718 8.930 6.234 MuHd_095 : 21.872 17.767 6.802 5.827 MuHd_100 : 30.245 22.529 9.763 7.322 MuHd_105 : 31.736 23.123 9.637 7.792 Hmax_075 : 20.417 24.700 6.893 7.817 Hmax_095 : 18.200 25.000 5.286 7.220 Hmax_100 : 17.600 23.700 5.286 6.410 Hmax_105 : 18.317 23.300 5.326 7.093 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9131 0.0869 DFMC : 0.9599 0.0401
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 PKNH_0110500 MKDTKVLRTLLCGALFLLHLCQDARCHKVYKVGPEPIPCSQCKDLRECSACLFEEEESPYAIHLKLNKNKPNDHSNLKKH 80 HDSLKLGGVKYYVKRGEGISGSLGNPLGNTMDDIDSINEEIQNRRKESAGGGRNFIEMSNYKKDSLSDYFSGVQKHAHSE 160 VGRVNMGDEKGRRENEGGEGGEGHASEHADRVERNFIDLKNTNAVVEQTEENVFLIPLKHLRDSQFVGKLLVGVPPQEIH 240 PIFDTGSTNLWVVTTDCEEKSCKKVQRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGKETFVLGNHTVRNQTFGLVES 320 ESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNLLKQNKNLSPQFSFYISPDDNTSTFIIGGLSKSFYQGSIYM 400 LPVIKEYYWEVELDGIYVGEKKICCEEKSYAIFDTGTSYNTMPSAQIKNFFDVVPSVACTEENYQDVLKNYPIIKYVFGD 480 LIIELMPEEYMILNEDNCIPAYMQIDVPSEKNHAYLLGSLAFMRHYYTVFVRGVNGKPSMVGVAKAKSAASAVN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0110500 2 -----MK|DT 0.074 . PKNH_0110500 5 --MKDTK|VL 0.065 . PKNH_0110500 8 KDTKVLR|TL 0.076 . PKNH_0110500 25 HLCQDAR|CH 0.081 . PKNH_0110500 28 QDARCHK|VY 0.115 . PKNH_0110500 31 RCHKVYK|VG 0.063 . PKNH_0110500 43 IPCSQCK|DL 0.085 . PKNH_0110500 46 SQCKDLR|EC 0.115 . PKNH_0110500 65 PYAIHLK|LN 0.065 . PKNH_0110500 68 IHLKLNK|NK 0.053 . PKNH_0110500 70 LKLNKNK|PN 0.073 . PKNH_0110500 78 NDHSNLK|KH 0.068 . PKNH_0110500 79 DHSNLKK|HH 0.112 . PKNH_0110500 85 KHHDSLK|LG 0.070 . PKNH_0110500 90 LKLGGVK|YY 0.060 . PKNH_0110500 94 GVKYYVK|RG 0.059 . PKNH_0110500 95 VKYYVKR|GE 0.265 . PKNH_0110500 124 NEEIQNR|RK 0.089 . PKNH_0110500 125 EEIQNRR|KE 0.132 . PKNH_0110500 126 EIQNRRK|ES 0.089 . PKNH_0110500 133 ESAGGGR|NF 0.079 . PKNH_0110500 142 IEMSNYK|KD 0.058 . PKNH_0110500 143 EMSNYKK|DS 0.112 . PKNH_0110500 155 YFSGVQK|HA 0.086 . PKNH_0110500 163 AHSEVGR|VN 0.117 . PKNH_0110500 170 VNMGDEK|GR 0.064 . PKNH_0110500 172 MGDEKGR|RE 0.096 . PKNH_0110500 173 GDEKGRR|EN 0.221 . PKNH_0110500 191 ASEHADR|VE 0.078 . PKNH_0110500 194 HADRVER|NF 0.223 . PKNH_0110500 200 RNFIDLK|NT 0.069 . PKNH_0110500 219 VFLIPLK|HL 0.067 . PKNH_0110500 222 IPLKHLR|DS 0.116 . PKNH_0110500 229 DSQFVGK|LL 0.073 . PKNH_0110500 260 TTDCEEK|SC 0.081 . PKNH_0110500 263 CEEKSCK|KV 0.075 . PKNH_0110500 264 EEKSCKK|VQ 0.069 . PKNH_0110500 267 SCKKVQR|YN 0.125 . PKNH_0110500 272 QRYNPYK|SK 0.084 . PKNH_0110500 274 YNPYKSK|TF 0.066 . PKNH_0110500 277 YKSKTFR|RS 0.131 . PKNH_0110500 278 KSKTFRR|SF 0.366 . PKNH_0110500 283 RRSFIGK|NL 0.112 . PKNH_0110500 300 ISGSIGK|ET 0.070 . PKNH_0110500 311 LGNHTVR|NQ 0.094 . PKNH_0110500 353 EMLSAGK|VS 0.052 . PKNH_0110500 362 FFDNLLK|QN 0.057 . PKNH_0110500 365 NLLKQNK|NL 0.069 . PKNH_0110500 391 IIGGLSK|SF 0.079 . PKNH_0110500 405 YMLPVIK|EY 0.058 . PKNH_0110500 421 GIYVGEK|KI 0.067 . PKNH_0110500 422 IYVGEKK|IC 0.082 . PKNH_0110500 428 KICCEEK|SY 0.088 . PKNH_0110500 448 MPSAQIK|NF 0.112 . PKNH_0110500 469 NYQDVLK|NY 0.060 . PKNH_0110500 475 KNYPIIK|YV 0.094 . PKNH_0110500 511 IDVPSEK|NH 0.059 . PKNH_0110500 524 GSLAFMR|HY 0.104 . PKNH_0110500 532 YYTVFVR|GV 0.142 . PKNH_0110500 537 VRGVNGK|PS 0.076 . PKNH_0110500 545 SMVGVAK|AK 0.077 . PKNH_0110500 547 VGVAKAK|SA 0.103 . ____________________________^_________________

  • Fasta :-

    >PKNH_0110500 ATGAAGGACACCAAAGTGTTAAGGACGCTCCTCTGTGGAGCTTTGTTTTTACTCCACTTA TGCCAGGATGCCAGATGCCACAAGGTGTATAAGGTTGGCCCAGAACCCATCCCTTGTTCA CAATGCAAAGACTTACGTGAATGTAGTGCGTGTCTGTTTGAAGAGGAAGAATCTCCATAT GCTATCCACTTGAAGCTAAACAAGAACAAGCCAAATGACCATAGCAATTTGAAGAAGCAT CACGATTCGCTGAAGCTCGGCGGTGTGAAGTACTACGTGAAGAGGGGAGAAGGAATTTCT GGCAGTTTAGGTAACCCGTTGGGGAATACCATGGATGATATAGATAGCATTAACGAAGAG ATCCAGAACAGGAGGAAGGAGAGCGCCGGAGGAGGAAGGAACTTCATTGAAATGAGCAAT TATAAGAAGGATAGCCTATCAGATTACTTTTCGGGTGTGCAGAAGCATGCGCACTCGGAG GTGGGGAGAGTAAACATGGGGGATGAAAAGGGAAGGAGGGAGAACGAAGGAGGTGAGGGA GGTGAGGGACATGCGAGTGAGCACGCCGACAGAGTGGAAAGGAATTTCATCGACCTGAAG AACACAAACGCAGTGGTGGAACAAACAGAAGAGAATGTCTTTCTAATCCCGTTAAAGCAT TTGCGAGATAGCCAATTCGTAGGAAAACTTTTAGTTGGTGTACCCCCACAGGAGATCCAC CCCATCTTCGACACGGGAAGTACGAATTTGTGGGTCGTTACAACAGATTGTGAAGAGAAA TCTTGCAAAAAAGTTCAGAGGTATAATCCGTATAAATCGAAAACATTTAGGAGATCATTT ATCGGGAAGAATCTTCACATCGTTTTCGGATCGGGTTCTATTTCAGGATCCATTGGCAAA GAAACTTTCGTCTTGGGAAACCACACAGTACGAAATCAGACATTTGGATTGGTGGAGAGT GAATCTAACGACAGCTTAAATGGAGATAATATTTTTGACTATATAGACTTTGAAGGTATT GTAGGTCTTGGCTTTCCAGAAATGTTGTCTGCAGGAAAGGTTTCCTTTTTCGACAACTTA CTAAAGCAGAACAAAAATCTCTCCCCGCAGTTTTCCTTCTACATTTCTCCAGATGACAAC ACCTCTACTTTTATAATAGGTGGTTTGAGTAAATCTTTTTACCAAGGTAGCATATATATG CTGCCTGTTATTAAGGAATATTATTGGGAAGTGGAGTTGGATGGAATTTACGTAGGGGAG AAGAAAATTTGTTGTGAGGAGAAGAGCTACGCGATTTTTGATACAGGGACATCATACAAC ACTATGCCGAGTGCACAGATAAAAAACTTCTTTGATGTAGTTCCTTCTGTCGCTTGTACG GAAGAGAATTATCAGGATGTCCTTAAAAATTATCCGATCATTAAGTATGTCTTTGGCGAC TTGATCATAGAACTCATGCCTGAGGAATACATGATTTTGAATGAGGACAACTGCATTCCG GCTTACATGCAGATTGATGTTCCATCGGAGAAGAATCACGCGTATCTGCTCGGAAGTTTA GCCTTCATGCGACATTACTATACGGTATTCGTGCGTGGCGTGAACGGCAAGCCTTCCATG GTGGGTGTCGCCAAGGCCAAGTCGGCCGCATCAGCTGTGAATTGA
  • Download Fasta

  • Fasta :-

    MKDTKVLRTLLCGALFLLHLCQDARCHKVYKVGPEPIPCSQCKDLRECSACLFEEEESPY AIHLKLNKNKPNDHSNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPLGNTMDDIDSINEE IQNRRKESAGGGRNFIEMSNYKKDSLSDYFSGVQKHAHSEVGRVNMGDEKGRRENEGGEG GEGHASEHADRVERNFIDLKNTNAVVEQTEENVFLIPLKHLRDSQFVGKLLVGVPPQEIH PIFDTGSTNLWVVTTDCEEKSCKKVQRYNPYKSKTFRRSFIGKNLHIVFGSGSISGSIGK ETFVLGNHTVRNQTFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNL LKQNKNLSPQFSFYISPDDNTSTFIIGGLSKSFYQGSIYMLPVIKEYYWEVELDGIYVGE KKICCEEKSYAIFDTGTSYNTMPSAQIKNFFDVVPSVACTEENYQDVLKNYPIIKYVFGD LIIELMPEEYMILNEDNCIPAYMQIDVPSEKNHAYLLGSLAFMRHYYTVFVRGVNGKPSM VGVAKAKSAASAVN

  • title: catalytic residue
  • coordinates: D244,D434
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0110500145 SYKKDSLSDY0.995unspPKNH_0110500376 SSFYISPDDN0.995unsp


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India