PKNH_0114200 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0114200OTHER0.9997160.0002340.000050
No Results

  • Fasta :-

    >PKNH_0114200 MGNTLNRFIFNNPVEGFYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFCHGNGENIY MLYDYFCEASKIWNVNVLLYDYPGYGESTGMPNEKSMYQSGRAVYDYMVNVLNIKAESIV LYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPFWVAGGKHNDIELIENKKFNQGIKSFLEFL RNNV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0114200.fa Sequence name : PKNH_0114200 Sequence length : 244 VALUES OF COMPUTED PARAMETERS Coef20 : 3.318 CoefTot : -0.782 ChDiff : 4 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.541 0.131 0.515 MesoH : 0.053 0.973 -0.132 0.339 MuHd_075 : 25.851 20.877 8.018 6.084 MuHd_095 : 35.989 20.894 9.156 7.868 MuHd_100 : 22.480 11.416 5.934 5.137 MuHd_105 : 5.998 2.276 1.815 2.251 Hmax_075 : 14.817 15.983 2.652 5.845 Hmax_095 : 11.112 11.025 0.779 5.093 Hmax_100 : 10.200 8.700 0.489 4.520 Hmax_105 : 1.700 5.600 -2.089 3.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8441 0.1559 DFMC : 0.8830 0.1170
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 244 PKNH_0114200 MGNTLNRFIFNNPVEGFYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFCHGNGENIYMLYDYFCEASKIWNVNVLLY 80 DYPGYGESTGMPNEKSMYQSGRAVYDYMVNVLNIKAESIVLYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTR 160 FILPFDSFCNIKKIGMVPCFAFFIHGTDDKIVPFYHGLSLYEKCKLKVHPFWVAGGKHNDIELIENKKFNQGIKSFLEFL 240 RNNV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0114200 7 MGNTLNR|FI 0.112 . PKNH_0114200 20 VEGFYEK|FR 0.062 . PKNH_0114200 22 GFYEKFR|LD 0.098 . PKNH_0114200 35 ETESGDR|IA 0.069 . PKNH_0114200 43 AAHFINR|KA 0.082 . PKNH_0114200 44 AHFINRK|AP 0.079 . PKNH_0114200 71 YFCEASK|IW 0.056 . PKNH_0114200 95 TGMPNEK|SM 0.109 . PKNH_0114200 102 SMYQSGR|AV 0.210 . PKNH_0114200 115 VNVLNIK|AE 0.065 . PKNH_0114200 124 SIVLYGK|SI 0.082 . PKNH_0114200 138 IDIAITR|KV 0.129 . PKNH_0114200 139 DIAITRK|VK 0.101 . PKNH_0114200 141 AITRKVK|GI 0.118 . PKNH_0114200 158 LLNICFK|TR 0.063 . PKNH_0114200 160 NICFKTR|FI 0.096 . PKNH_0114200 172 DSFCNIK|KI 0.072 . PKNH_0114200 173 SFCNIKK|IG 0.080 . PKNH_0114200 190 IHGTDDK|IV 0.065 . PKNH_0114200 203 GLSLYEK|CK 0.069 . PKNH_0114200 205 SLYEKCK|LK 0.061 . PKNH_0114200 207 YEKCKLK|VH 0.055 . PKNH_0114200 217 FWVAGGK|HN 0.067 . PKNH_0114200 227 IELIENK|KF 0.068 . PKNH_0114200 228 ELIENKK|FN 0.089 . PKNH_0114200 234 KFNQGIK|SF 0.080 . PKNH_0114200 241 SFLEFLR|NN 0.076 . ____________________________^_________________

  • Fasta :-

    >PKNH_0114200 ATGGGGAACACCCTGAATCGGTTTATTTTTAATAACCCCGTCGAGGGGTTCTACGAAAAA TTTCGCTTGGACTTTATTTTTGTTGAAACGGAGAGCGGGGACAGAATTGCGGCTCACTTC ATCAATAGGAAAGCCCCACTAACCATTTTGTTTTGCCATGGCAATGGTGAGAACATCTAC ATGTTGTATGATTACTTCTGCGAGGCGTCCAAAATATGGAATGTGAACGTGCTCTTGTAC GATTACCCCGGATACGGAGAGAGTACTGGAATGCCGAACGAAAAGAGTATGTACCAAAGT GGAAGAGCGGTGTATGATTACATGGTGAACGTTTTAAACATAAAGGCAGAGAGTATTGTT CTGTACGGGAAGTCCATAGGATCGTGCGCTGCAATCGACATAGCCATTACGAGGAAGGTT AAGGGCATAATTCTGCAGAGCGCCCTAATGTCCCTCCTGAACATTTGCTTTAAAACGCGG TTTATCCTTCCATTCGATTCTTTCTGCAACATAAAGAAGATTGGCATGGTTCCCTGCTTC GCCTTTTTCATTCATGGCACTGACGACAAGATAGTCCCCTTTTATCACGGATTGAGTCTC TATGAAAAGTGCAAACTGAAAGTGCATCCCTTCTGGGTTGCCGGCGGCAAGCACAATGAC ATCGAGTTGATAGAGAACAAGAAGTTCAACCAAGGCATCAAGTCTTTTTTGGAGTTTCTT CGTAATAATGTGTAG
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  • Fasta :-

    MGNTLNRFIFNNPVEGFYEKFRLDFIFVETESGDRIAAHFINRKAPLTILFCHGNGENIY MLYDYFCEASKIWNVNVLLYDYPGYGESTGMPNEKSMYQSGRAVYDYMVNVLNIKAESIV LYGKSIGSCAAIDIAITRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPFWVAGGKHNDIELIENKKFNQGIKSFLEFL RNNV

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PK8_0400c      PKH_011360      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India