PKNH_0114800 | methionine aminopeptidase 1c, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0114800SP0.0071960.9926480.000156CS pos: 22-23. GES-IG. Pr: 0.7835
No Results

  • Fasta :-

    >PKNH_0114800 MKEYTLVLLTWALLWLFRGGESIGRVKRVRPVNPSGHVNRSGCTGCGGPGRTRAWRGFIR LGKNSKGCYAKQRFPYRRQPERNHLTCATAGEGFSNTIHHDVKKNTQNYEEDGPPASFHR YIENIKTRKNVHPSIRITDFDKKFIRCKESYNRRYSHLKDSELFGNFRFVGRQKKGIMSP KYYLPKYVERPNYHRTGTPVPVPYEGERKMNSNTKGTESLHPYSNIKSEDDIETISSNCL FARELMDDVSHIICEGITTNDIDIYILNKCINNGYYPSPLNYHLFPKSSCISINEILCHG IPDNNVLYENDIVKVDISVFKDGFHADMCESFLVPKLSRNEKKKKKKFYDFIYLNDKLRT KYTKFIMKYNFDLTTNKVVKTGKQCSIRRIKYDPPNSKDRPNDQYNSFDDNTNCVMRSAH FDGNEITHEEDYYNDGNGATHMSRDNMQRDDLDELELFHRQYDEQVIYNKNQNSQTYDDI QRYIYNKTRGSPKDKNNRNHQNRFAFFDKGKLEADEFKMYMRKKNIDLIKTAHECTMEAI RVCKAGVPFSAIGDAIANHLDRINKRLHVHYAVVPHLCGHNIGKNFHEEPFIIHTRNNDD RQMCENLVFTIEPIISERPCDFIMWPDNWTMSNARYVFSAQFEHTIVVRKDGAEILTGKT DRSPKFVWECEET
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0114800.fa Sequence name : PKNH_0114800 Sequence length : 673 VALUES OF COMPUTED PARAMETERS Coef20 : 4.340 CoefTot : -3.373 ChDiff : 17 ZoneTo : 80 KR : 17 DE : 2 CleavSite : 79 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.282 0.025 0.574 MesoH : -0.807 0.164 -0.368 0.200 MuHd_075 : 35.049 17.480 7.475 7.846 MuHd_095 : 41.180 20.228 10.159 9.000 MuHd_100 : 46.216 24.095 10.913 10.236 MuHd_105 : 54.810 27.845 13.457 11.363 Hmax_075 : 9.100 12.600 0.741 3.640 Hmax_095 : 11.000 18.113 2.778 3.960 Hmax_100 : 11.000 17.900 2.778 4.290 Hmax_105 : 14.700 17.600 2.484 4.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0241 0.9759 DFMC : 0.0264 0.9736 This protein is probably imported in mitochondria. f(Ser) = 0.0500 f(Arg) = 0.1500 CMi = 0.17857 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 673 PKNH_0114800 MKEYTLVLLTWALLWLFRGGESIGRVKRVRPVNPSGHVNRSGCTGCGGPGRTRAWRGFIRLGKNSKGCYAKQRFPYRRQP 80 ERNHLTCATAGEGFSNTIHHDVKKNTQNYEEDGPPASFHRYIENIKTRKNVHPSIRITDFDKKFIRCKESYNRRYSHLKD 160 SELFGNFRFVGRQKKGIMSPKYYLPKYVERPNYHRTGTPVPVPYEGERKMNSNTKGTESLHPYSNIKSEDDIETISSNCL 240 FARELMDDVSHIICEGITTNDIDIYILNKCINNGYYPSPLNYHLFPKSSCISINEILCHGIPDNNVLYENDIVKVDISVF 320 KDGFHADMCESFLVPKLSRNEKKKKKKFYDFIYLNDKLRTKYTKFIMKYNFDLTTNKVVKTGKQCSIRRIKYDPPNSKDR 400 PNDQYNSFDDNTNCVMRSAHFDGNEITHEEDYYNDGNGATHMSRDNMQRDDLDELELFHRQYDEQVIYNKNQNSQTYDDI 480 QRYIYNKTRGSPKDKNNRNHQNRFAFFDKGKLEADEFKMYMRKKNIDLIKTAHECTMEAIRVCKAGVPFSAIGDAIANHL 560 DRINKRLHVHYAVVPHLCGHNIGKNFHEEPFIIHTRNNDDRQMCENLVFTIEPIISERPCDFIMWPDNWTMSNARYVFSA 640 QFEHTIVVRKDGAEILTGKTDRSPKFVWECEET 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0114800 2 -----MK|EY 0.068 . PKNH_0114800 18 ALLWLFR|GG 0.092 . PKNH_0114800 25 GGESIGR|VK 0.067 . PKNH_0114800 27 ESIGRVK|RV 0.079 . PKNH_0114800 28 SIGRVKR|VR 0.428 . PKNH_0114800 30 GRVKRVR|PV 0.212 . PKNH_0114800 40 PSGHVNR|SG 0.217 . PKNH_0114800 51 GCGGPGR|TR 0.079 . PKNH_0114800 53 GGPGRTR|AW 0.085 . PKNH_0114800 56 GRTRAWR|GF 0.331 . PKNH_0114800 60 AWRGFIR|LG 0.081 . PKNH_0114800 63 GFIRLGK|NS 0.114 . PKNH_0114800 66 RLGKNSK|GC 0.073 . PKNH_0114800 71 SKGCYAK|QR 0.080 . PKNH_0114800 73 GCYAKQR|FP 0.117 . PKNH_0114800 77 KQRFPYR|RQ 0.084 . PKNH_0114800 78 QRFPYRR|QP 0.175 . PKNH_0114800 82 YRRQPER|NH 0.089 . PKNH_0114800 103 TIHHDVK|KN 0.070 . PKNH_0114800 104 IHHDVKK|NT 0.140 . PKNH_0114800 120 PPASFHR|YI 0.155 . PKNH_0114800 126 RYIENIK|TR 0.056 . PKNH_0114800 128 IENIKTR|KN 0.081 . PKNH_0114800 129 ENIKTRK|NV 0.152 . PKNH_0114800 136 NVHPSIR|IT 0.095 . PKNH_0114800 142 RITDFDK|KF 0.060 . PKNH_0114800 143 ITDFDKK|FI 0.114 . PKNH_0114800 146 FDKKFIR|CK 0.094 . PKNH_0114800 148 KKFIRCK|ES 0.063 . PKNH_0114800 153 CKESYNR|RY 0.084 . PKNH_0114800 154 KESYNRR|YS 0.177 . PKNH_0114800 159 RRYSHLK|DS 0.084 . PKNH_0114800 168 ELFGNFR|FV 0.158 . PKNH_0114800 172 NFRFVGR|QK 0.096 . PKNH_0114800 174 RFVGRQK|KG 0.059 . PKNH_0114800 175 FVGRQKK|GI 0.271 . PKNH_0114800 181 KGIMSPK|YY 0.072 . PKNH_0114800 186 PKYYLPK|YV 0.087 . PKNH_0114800 190 LPKYVER|PN 0.100 . PKNH_0114800 195 ERPNYHR|TG 0.080 . PKNH_0114800 208 VPYEGER|KM 0.076 . PKNH_0114800 209 PYEGERK|MN 0.083 . PKNH_0114800 215 KMNSNTK|GT 0.079 . PKNH_0114800 227 HPYSNIK|SE 0.108 . PKNH_0114800 243 SNCLFAR|EL 0.130 . PKNH_0114800 269 DIYILNK|CI 0.060 . PKNH_0114800 287 NYHLFPK|SS 0.107 . PKNH_0114800 314 YENDIVK|VD 0.062 . PKNH_0114800 321 VDISVFK|DG 0.079 . PKNH_0114800 336 ESFLVPK|LS 0.061 . PKNH_0114800 339 LVPKLSR|NE 0.072 . PKNH_0114800 342 KLSRNEK|KK 0.179 . PKNH_0114800 343 LSRNEKK|KK 0.134 . PKNH_0114800 344 SRNEKKK|KK 0.135 . PKNH_0114800 345 RNEKKKK|KK 0.105 . PKNH_0114800 346 NEKKKKK|KF 0.107 . PKNH_0114800 347 EKKKKKK|FY 0.161 . PKNH_0114800 357 FIYLNDK|LR 0.054 . PKNH_0114800 359 YLNDKLR|TK 0.104 . PKNH_0114800 361 NDKLRTK|YT 0.064 . PKNH_0114800 364 LRTKYTK|FI 0.090 . PKNH_0114800 368 YTKFIMK|YN 0.070 . PKNH_0114800 377 FDLTTNK|VV 0.065 . PKNH_0114800 380 TTNKVVK|TG 0.063 . PKNH_0114800 383 KVVKTGK|QC 0.065 . PKNH_0114800 388 GKQCSIR|RI 0.095 . PKNH_0114800 389 KQCSIRR|IK 0.123 . PKNH_0114800 391 CSIRRIK|YD 0.115 . PKNH_0114800 398 YDPPNSK|DR 0.058 . PKNH_0114800 400 PPNSKDR|PN 0.127 . PKNH_0114800 417 NTNCVMR|SA 0.202 . PKNH_0114800 444 GATHMSR|DN 0.098 . PKNH_0114800 449 SRDNMQR|DD 0.137 . PKNH_0114800 460 ELELFHR|QY 0.088 . PKNH_0114800 470 EQVIYNK|NQ 0.056 . PKNH_0114800 482 TYDDIQR|YI 0.098 . PKNH_0114800 487 QRYIYNK|TR 0.061 . PKNH_0114800 489 YIYNKTR|GS 0.090 . PKNH_0114800 493 KTRGSPK|DK 0.077 . PKNH_0114800 495 RGSPKDK|NN 0.079 . PKNH_0114800 498 PKDKNNR|NH 0.073 . PKNH_0114800 503 NRNHQNR|FA 0.156 . PKNH_0114800 509 RFAFFDK|GK 0.067 . PKNH_0114800 511 AFFDKGK|LE 0.069 . PKNH_0114800 518 LEADEFK|MY 0.068 . PKNH_0114800 522 EFKMYMR|KK 0.077 . PKNH_0114800 523 FKMYMRK|KN 0.090 . PKNH_0114800 524 KMYMRKK|NI 0.142 . PKNH_0114800 530 KNIDLIK|TA 0.076 . PKNH_0114800 541 CTMEAIR|VC 0.087 . PKNH_0114800 544 EAIRVCK|AG 0.102 . PKNH_0114800 562 IANHLDR|IN 0.089 . PKNH_0114800 565 HLDRINK|RL 0.108 . PKNH_0114800 566 LDRINKR|LH 0.137 . PKNH_0114800 584 CGHNIGK|NF 0.071 . PKNH_0114800 596 PFIIHTR|NN 0.106 . PKNH_0114800 601 TRNNDDR|QM 0.137 . PKNH_0114800 618 EPIISER|PC 0.088 . PKNH_0114800 635 WTMSNAR|YV 0.165 . PKNH_0114800 649 EHTIVVR|KD 0.104 . PKNH_0114800 650 HTIVVRK|DG 0.111 . PKNH_0114800 659 AEILTGK|TD 0.055 . PKNH_0114800 662 LTGKTDR|SP 0.118 . PKNH_0114800 665 KTDRSPK|FV 0.345 . ____________________________^_________________

  • Fasta :-

    >PKNH_0114800 ATGAAGGAGTATACGCTCGTCCTGCTGACCTGGGCGCTCCTCTGGTTGTTCAGGGGGGGT GAAAGCATCGGAAGGGTCAAACGTGTCAGACCTGTCAACCCTTCTGGCCATGTCAACCGT AGTGGTTGCACTGGTTGCGGTGGCCCAGGACGCACGAGAGCGTGGCGGGGGTTCATTCGC CTTGGTAAGAATTCCAAAGGGTGCTACGCGAAGCAGAGGTTCCCTTACCGCCGACAGCCC GAAAGGAATCACCTGACCTGCGCCACTGCAGGGGAAGGGTTTTCGAACACCATCCACCAC GATGTGAAGAAGAATACACAGAACTACGAAGAAGATGGCCCACCGGCATCCTTCCACAGA TATATTGAAAATATTAAGACAAGAAAAAACGTCCACCCAAGTATACGCATAACCGACTTT GATAAAAAATTCATCAGATGTAAGGAGAGTTACAATAGGAGGTATTCCCATCTGAAGGAC AGCGAGTTATTTGGAAATTTCCGCTTCGTGGGTAGACAAAAAAAGGGGATCATGTCTCCT AAGTATTATTTGCCTAAGTATGTAGAGAGGCCCAATTACCACAGGACAGGTACGCCTGTA CCTGTTCCATACGAGGGTGAGCGAAAAATGAATAGCAATACCAAAGGAACAGAATCCCTC CACCCTTATAGCAACATAAAAAGTGAGGATGACATAGAAACAATTAGTAGCAATTGTCTG TTCGCTCGCGAACTCATGGATGACGTATCACATATTATCTGCGAAGGAATAACAACAAAC GATATAGACATTTACATTCTCAACAAGTGTATAAACAATGGTTACTATCCCTCTCCTTTG AATTATCATCTCTTCCCGAAAAGCTCGTGTATATCTATTAACGAAATACTTTGCCATGGA ATCCCTGACAATAACGTCTTGTACGAGAACGACATCGTGAAGGTAGACATCAGCGTGTTC AAAGATGGATTTCATGCGGACATGTGTGAAAGCTTCCTCGTTCCGAAATTATCAAGAAAT GAAAAAAAAAAAAAAAAAAAATTCTACGATTTTATATACTTAAATGATAAGCTCCGGACG AAATATACAAAATTTATTATGAAGTACAACTTTGATTTAACTACTAATAAAGTTGTGAAA ACTGGAAAACAATGCTCCATCAGAAGGATCAAGTACGACCCACCCAATTCGAAGGATAGA CCCAATGACCAGTACAACTCCTTCGACGATAATACGAATTGTGTGATGCGCAGTGCCCAC TTTGATGGGAACGAAATCACGCATGAGGAGGATTATTACAACGATGGTAATGGAGCGACA CATATGTCCAGAGACAACATGCAGAGGGACGACCTGGACGAACTGGAACTCTTCCACCGA CAGTACGATGAGCAGGTCATCTATAACAAGAACCAAAACAGCCAAACTTATGATGACATA CAGCGGTACATATATAACAAAACCAGAGGATCTCCAAAAGACAAGAACAACCGGAATCAC CAGAACAGGTTCGCCTTCTTCGACAAAGGAAAGCTTGAAGCGGACGAGTTCAAAATGTAC ATGCGTAAAAAAAATATCGACCTCATAAAAACGGCACATGAGTGCACCATGGAAGCTATC CGTGTTTGTAAGGCAGGCGTTCCTTTCAGTGCGATAGGAGATGCAATAGCCAACCACCTA GACAGGATAAATAAGCGCCTCCATGTACATTATGCAGTCGTCCCACATCTGTGTGGACAT AACATTGGAAAAAATTTTCACGAAGAACCTTTTATTATTCATACAAGAAATAACGACGAC AGACAGATGTGTGAAAATCTTGTCTTCACCATTGAACCCATTATATCTGAGCGTCCCTGT GATTTTATCATGTGGCCAGACAATTGGACTATGTCCAATGCCAGGTATGTTTTTTCCGCT CAGTTCGAGCATACTATCGTTGTGCGCAAAGATGGAGCAGAGATCCTCACGGGGAAAACG GATCGCTCTCCAAAATTTGTTTGGGAATGCGAAGAGACGTAG
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  • Fasta :-

    MKEYTLVLLTWALLWLFRGGESIGRVKRVRPVNPSGHVNRSGCTGCGGPGRTRAWRGFIR LGKNSKGCYAKQRFPYRRQPERNHLTCATAGEGFSNTIHHDVKKNTQNYEEDGPPASFHR YIENIKTRKNVHPSIRITDFDKKFIRCKESYNRRYSHLKDSELFGNFRFVGRQKKGIMSP KYYLPKYVERPNYHRTGTPVPVPYEGERKMNSNTKGTESLHPYSNIKSEDDIETISSNCL FARELMDDVSHIICEGITTNDIDIYILNKCINNGYYPSPLNYHLFPKSSCISINEILCHG IPDNNVLYENDIVKVDISVFKDGFHADMCESFLVPKLSRNEKKKKKKFYDFIYLNDKLRT KYTKFIMKYNFDLTTNKVVKTGKQCSIRRIKYDPPNSKDRPNDQYNSFDDNTNCVMRSAH FDGNEITHEEDYYNDGNGATHMSRDNMQRDDLDELELFHRQYDEQVIYNKNQNSQTYDDI QRYIYNKTRGSPKDKNNRNHQNRFAFFDKGKLEADEFKMYMRKKNIDLIKTAHECTMEAI RVCKAGVPFSAIGDAIANHLDRINKRLHVHYAVVPHLCGHNIGKNFHEEPFIIHTRNNDD RQMCENLVFTIEPIISERPCDFIMWPDNWTMSNARYVFSAQFEHTIVVRKDGAEILTGKT DRSPKFVWECEET

  • title: active site
  • coordinates: H299,D316,D327,H580,E612,E643
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0114800491 SKTRGSPKDK0.998unspPKNH_0114800491 SKTRGSPKDK0.998unspPKNH_0114800491 SKTRGSPKDK0.998unspPKNH_0114800156 SNRRYSHLKD0.993unspPKNH_0114800198 THRTGTPVPV0.994unsp

PK8_0340w      PKH_011420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India