PKNH_0301300 | ubiquitin specific protease, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0301300OTHER0.9998320.0000560.000112
No Results

  • Fasta :-

    >PKNH_0301300 MNLAEHKLRDLFYAKNYKYYAKYDNCGNFQRRHTSFQNNGNVCYCNASLQLLLSIKPLCI YLLSKFEKIYGRTKSKSKYKGDILKALFYIIEETYKVEKGYLCTDKHINLLKKMKKYNSN IVINAQNDAHEFLLMLLNYINVECNRDSNFPPNFEIILDDKDKKEKASEKYWAKYLFKDN SIITDLLGFQNISSITCTHCGHTRYSFEFCLDLGLEFQSEHVQSTSLIDLLRSNIMKSDD FCHLFCPICKSKQNSSIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLP WDGLIDFTSFAYMSNHESLSNSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMK KLTNPFNPENISDIYLLLLRRVT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0301300.fa Sequence name : PKNH_0301300 Sequence length : 383 VALUES OF COMPUTED PARAMETERS Coef20 : 3.398 CoefTot : 0.129 ChDiff : 15 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 1.647 0.147 0.535 MesoH : -0.666 0.162 -0.354 0.148 MuHd_075 : 20.852 11.543 5.794 4.205 MuHd_095 : 22.198 18.460 6.306 4.024 MuHd_100 : 15.546 16.946 4.091 3.192 MuHd_105 : 16.949 15.952 5.065 3.977 Hmax_075 : 0.700 5.700 -1.828 3.040 Hmax_095 : 0.700 8.200 -2.908 2.380 Hmax_100 : -2.700 6.700 -3.362 2.420 Hmax_105 : -5.400 5.300 -3.905 1.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9681 0.0319 DFMC : 0.9819 0.0181
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 383 PKNH_0301300 MNLAEHKLRDLFYAKNYKYYAKYDNCGNFQRRHTSFQNNGNVCYCNASLQLLLSIKPLCIYLLSKFEKIYGRTKSKSKYK 80 GDILKALFYIIEETYKVEKGYLCTDKHINLLKKMKKYNSNIVINAQNDAHEFLLMLLNYINVECNRDSNFPPNFEIILDD 160 KDKKEKASEKYWAKYLFKDNSIITDLLGFQNISSITCTHCGHTRYSFEFCLDLGLEFQSEHVQSTSLIDLLRSNIMKSDD 240 FCHLFCPICKSKQNSSIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLPWDGLIDFTSFAYMSNHESLS 320 NSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMKKLTNPFNPENISDIYLLLLRRVT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................P............................ 320 ............................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0301300 7 MNLAEHK|LR 0.054 . PKNH_0301300 9 LAEHKLR|DL 0.142 . PKNH_0301300 15 RDLFYAK|NY 0.056 . PKNH_0301300 18 FYAKNYK|YY 0.066 . PKNH_0301300 22 NYKYYAK|YD 0.073 . PKNH_0301300 31 NCGNFQR|RH 0.081 . PKNH_0301300 32 CGNFQRR|HT 0.221 . PKNH_0301300 56 QLLLSIK|PL 0.065 . PKNH_0301300 65 CIYLLSK|FE 0.065 . PKNH_0301300 68 LLSKFEK|IY 0.082 . PKNH_0301300 72 FEKIYGR|TK 0.084 . PKNH_0301300 74 KIYGRTK|SK 0.087 . PKNH_0301300 76 YGRTKSK|SK 0.090 . PKNH_0301300 78 RTKSKSK|YK 0.103 . PKNH_0301300 80 KSKSKYK|GD 0.067 . PKNH_0301300 85 YKGDILK|AL 0.072 . PKNH_0301300 96 IIEETYK|VE 0.057 . PKNH_0301300 99 ETYKVEK|GY 0.060 . PKNH_0301300 106 GYLCTDK|HI 0.066 . PKNH_0301300 112 KHINLLK|KM 0.060 . PKNH_0301300 113 HINLLKK|MK 0.094 . PKNH_0301300 115 NLLKKMK|KY 0.065 . PKNH_0301300 116 LLKKMKK|YN 0.134 . PKNH_0301300 146 INVECNR|DS 0.083 . PKNH_0301300 161 EIILDDK|DK 0.060 . PKNH_0301300 163 ILDDKDK|KE 0.067 . PKNH_0301300 164 LDDKDKK|EK 0.081 . PKNH_0301300 166 DKDKKEK|AS 0.068 . PKNH_0301300 170 KEKASEK|YW 0.074 . PKNH_0301300 174 SEKYWAK|YL 0.076 . PKNH_0301300 178 WAKYLFK|DN 0.085 . PKNH_0301300 204 THCGHTR|YS 0.098 . PKNH_0301300 232 SLIDLLR|SN 0.113 . PKNH_0301300 237 LRSNIMK|SD 0.099 . PKNH_0301300 250 LFCPICK|SK 0.066 . PKNH_0301300 252 CPICKSK|QN 0.078 . PKNH_0301300 258 KQNSSIK|KG 0.061 . PKNH_0301300 259 QNSSIKK|GL 0.138 . PKNH_0301300 263 IKKGLYR|MP 0.082 . PKNH_0301300 274 YMIIYIK|RF 0.056 . PKNH_0301300 275 MIIYIKR|FK 0.221 . PKNH_0301300 277 IYIKRFK|WS 0.064 . PKNH_0301300 287 ECTNYFK|SR 0.072 . PKNH_0301300 289 TNYFKSR|VK 0.102 . PKNH_0301300 291 YFKSRVK|KI 0.063 . PKNH_0301300 292 FKSRVKK|ID 0.509 *ProP* PKNH_0301300 323 ESLSNSK|YL 0.063 . PKNH_0301300 346 HYTAVVK|HT 0.065 . PKNH_0301300 353 HTDGFYK|CN 0.070 . PKNH_0301300 358 YKCNDEK|MK 0.057 . PKNH_0301300 360 CNDEKMK|KL 0.064 . PKNH_0301300 361 NDEKMKK|LT 0.087 . PKNH_0301300 380 IYLLLLR|RV 0.077 . PKNH_0301300 381 YLLLLRR|VT 0.091 . ____________________________^_________________

  • Fasta :-

    >PKNH_0301300 ATGAACCTAGCTGAACACAAACTGCGTGATTTATTCTACGCGAAGAATTACAAATATTAC GCCAAGTATGATAACTGCGGAAATTTCCAAAGGAGACACACGTCCTTCCAGAACAATGGA AATGTGTGCTACTGCAACGCCTCCCTCCAACTGTTACTCTCCATCAAACCGCTCTGCATA TACCTGCTAAGCAAGTTTGAAAAAATATACGGAAGAACGAAATCAAAATCAAAATATAAG GGAGATATACTCAAGGCACTCTTTTACATTATTGAGGAAACGTACAAAGTTGAAAAAGGG TATTTATGCACAGACAAACATATTAATCTTTTAAAAAAAATGAAAAAATATAATTCCAAC ATAGTGATCAATGCACAAAATGACGCACACGAATTCTTGTTAATGCTACTCAACTATATA AACGTTGAGTGCAACCGAGATTCTAATTTCCCACCAAATTTTGAAATCATTCTCGACGAT AAAGATAAGAAAGAAAAGGCATCAGAAAAATACTGGGCAAAATATTTATTTAAGGATAAC AGCATAATAACAGATCTTTTGGGGTTCCAAAATATCTCTAGCATAACCTGCACACATTGT GGACATACAAGATACAGTTTTGAATTTTGCCTAGACTTAGGGTTAGAGTTCCAAAGCGAA CATGTACAAAGTACATCACTAATTGATTTATTAAGGAGTAATATCATGAAGAGCGATGAT TTTTGCCACTTATTTTGCCCTATCTGTAAATCCAAACAAAATAGTTCCATTAAAAAAGGC CTCTACAGAATGCCCAATTTGTATATGATTATTTATATCAAACGATTTAAGTGGAGTTAT GAGTGCACCAATTATTTCAAAAGTAGAGTGAAAAAAATTGACACAACAGTTTTACTTCCA TGGGATGGATTAATTGATTTTACTTCCTTTGCTTACATGTCCAATCATGAGTCTTTATCA AACTCAAAATATCTCATCGAGAGCTTTATTTGCCACAGCGGTAATAGTTACAATGGTCAC TACACAGCCGTCGTTAAGCATACCGATGGGTTCTACAAATGCAATGATGAAAAAATGAAA AAACTCACTAACCCCTTTAATCCTGAAAATATTAGCGACATTTATCTGCTCCTACTTAGA AGGGTTACCTAA
  • Download Fasta

  • Fasta :-

    MNLAEHKLRDLFYAKNYKYYAKYDNCGNFQRRHTSFQNNGNVCYCNASLQLLLSIKPLCI YLLSKFEKIYGRTKSKSKYKGDILKALFYIIEETYKVEKGYLCTDKHINLLKKMKKYNSN IVINAQNDAHEFLLMLLNYINVECNRDSNFPPNFEIILDDKDKKEKASEKYWAKYLFKDN SIITDLLGFQNISSITCTHCGHTRYSFEFCLDLGLEFQSEHVQSTSLIDLLRSNIMKSDD FCHLFCPICKSKQNSSIKKGLYRMPNLYMIIYIKRFKWSYECTNYFKSRVKKIDTTVLLP WDGLIDFTSFAYMSNHESLSNSKYLIESFICHSGNSYNGHYTAVVKHTDGFYKCNDEKMK KLTNPFNPENISDIYLLLLRRVT

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_030130077 STKSKSKYKG0.997unsp

PK4_0140w      PKH_031160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India