PKNH_0413500 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0413500SP0.0162630.9836340.000104CS pos: 22-23. VRC-TD. Pr: 0.8458
No Results

  • Fasta :-

    >PKNH_0413500 MKARLSLILILCAVCRECTVRCTDTAINQGQDAVQQPEESLSQDASDNSLPGQPVASPNG ADQAEVSQLQEGAVESSSNSADASNPNANADVTDVEGEKAATPSEGSKEGMQVKSSLLKG YKGVKVTGPCSASFLVFFAPYLFIDVDADSSNIYLGTDLNDLEITEKMGKGKDEKNKCQE GKTFKFVAFVVNDHLTIKWKVYDSEDQTPTPNSNVEMKKYKVKNLSGEFTSVQVHSTIQQ NGSNVFESKNYALSNDMPEKCDAIAANCFLSGSVYIEKCYRCTLKMEKVNSSDVCYNYIP KVDTPTKEEAPIYDHYLKNSPNLGGSTSNKNIADQEGASTINAAGGVHESVLQGQEAEEK EVKDVAVKAAPEGNPVVTEEKADGQVSTEVPSLPEAKVTEVQSAGTTGGEQPVPAVPEGQ AGAPSTTGPDSTSGTSPQPPVVSTQLSHVLKYIKKNKVKMNLITYKNNEAVSSGHDCSRS YSVNPDKYEECVKICEANWSKCENDAVPGFCLYQYAKENECFFCYV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0413500.fa Sequence name : PKNH_0413500 Sequence length : 526 VALUES OF COMPUTED PARAMETERS Coef20 : 5.113 CoefTot : 1.039 ChDiff : -24 ZoneTo : 16 KR : 3 DE : 0 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.906 1.753 0.331 0.685 MesoH : -0.520 0.045 -0.421 0.158 MuHd_075 : 19.029 12.616 5.837 3.746 MuHd_095 : 16.879 10.466 6.780 3.825 MuHd_100 : 16.175 13.073 7.395 3.635 MuHd_105 : 14.581 13.457 6.507 3.454 Hmax_075 : 19.483 24.150 5.693 6.568 Hmax_095 : 16.900 23.100 6.817 5.900 Hmax_100 : 6.700 17.100 4.399 4.870 Hmax_105 : 7.300 16.362 3.445 4.783 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8142 0.1858 DFMC : 0.7448 0.2552
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 526 PKNH_0413500 MKARLSLILILCAVCRECTVRCTDTAINQGQDAVQQPEESLSQDASDNSLPGQPVASPNGADQAEVSQLQEGAVESSSNS 80 ADASNPNANADVTDVEGEKAATPSEGSKEGMQVKSSLLKGYKGVKVTGPCSASFLVFFAPYLFIDVDADSSNIYLGTDLN 160 DLEITEKMGKGKDEKNKCQEGKTFKFVAFVVNDHLTIKWKVYDSEDQTPTPNSNVEMKKYKVKNLSGEFTSVQVHSTIQQ 240 NGSNVFESKNYALSNDMPEKCDAIAANCFLSGSVYIEKCYRCTLKMEKVNSSDVCYNYIPKVDTPTKEEAPIYDHYLKNS 320 PNLGGSTSNKNIADQEGASTINAAGGVHESVLQGQEAEEKEVKDVAVKAAPEGNPVVTEEKADGQVSTEVPSLPEAKVTE 400 VQSAGTTGGEQPVPAVPEGQAGAPSTTGPDSTSGTSPQPPVVSTQLSHVLKYIKKNKVKMNLITYKNNEAVSSGHDCSRS 480 YSVNPDKYEECVKICEANWSKCENDAVPGFCLYQYAKENECFFCYV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0413500 2 -----MK|AR 0.057 . PKNH_0413500 4 ---MKAR|LS 0.087 . PKNH_0413500 16 ILCAVCR|EC 0.082 . PKNH_0413500 21 CRECTVR|CT 0.151 . PKNH_0413500 99 TDVEGEK|AA 0.076 . PKNH_0413500 108 TPSEGSK|EG 0.076 . PKNH_0413500 114 KEGMQVK|SS 0.073 . PKNH_0413500 119 VKSSLLK|GY 0.073 . PKNH_0413500 122 SLLKGYK|GV 0.078 . PKNH_0413500 125 KGYKGVK|VT 0.066 . PKNH_0413500 167 DLEITEK|MG 0.056 . PKNH_0413500 170 ITEKMGK|GK 0.068 . PKNH_0413500 172 EKMGKGK|DE 0.076 . PKNH_0413500 175 GKGKDEK|NK 0.078 . PKNH_0413500 177 GKDEKNK|CQ 0.083 . PKNH_0413500 182 NKCQEGK|TF 0.070 . PKNH_0413500 185 QEGKTFK|FV 0.091 . PKNH_0413500 198 NDHLTIK|WK 0.058 . PKNH_0413500 200 HLTIKWK|VY 0.069 . PKNH_0413500 218 NSNVEMK|KY 0.074 . PKNH_0413500 219 SNVEMKK|YK 0.133 . PKNH_0413500 221 VEMKKYK|VK 0.066 . PKNH_0413500 223 MKKYKVK|NL 0.098 . PKNH_0413500 249 SNVFESK|NY 0.068 . PKNH_0413500 260 SNDMPEK|CD 0.066 . PKNH_0413500 278 GSVYIEK|CY 0.067 . PKNH_0413500 281 YIEKCYR|CT 0.092 . PKNH_0413500 285 CYRCTLK|ME 0.058 . PKNH_0413500 288 CTLKMEK|VN 0.055 . PKNH_0413500 301 CYNYIPK|VD 0.058 . PKNH_0413500 307 KVDTPTK|EE 0.063 . PKNH_0413500 318 IYDHYLK|NS 0.056 . PKNH_0413500 330 GGSTSNK|NI 0.104 . PKNH_0413500 360 GQEAEEK|EV 0.071 . PKNH_0413500 363 AEEKEVK|DV 0.079 . PKNH_0413500 368 VKDVAVK|AA 0.068 . PKNH_0413500 381 PVVTEEK|AD 0.067 . PKNH_0413500 397 PSLPEAK|VT 0.068 . PKNH_0413500 451 QLSHVLK|YI 0.090 . PKNH_0413500 454 HVLKYIK|KN 0.057 . PKNH_0413500 455 VLKYIKK|NK 0.079 . PKNH_0413500 457 KYIKKNK|VK 0.062 . PKNH_0413500 459 IKKNKVK|MN 0.066 . PKNH_0413500 466 MNLITYK|NN 0.073 . PKNH_0413500 479 SGHDCSR|SY 0.150 . PKNH_0413500 487 YSVNPDK|YE 0.069 . PKNH_0413500 493 KYEECVK|IC 0.058 . PKNH_0413500 501 CEANWSK|CE 0.068 . PKNH_0413500 517 CLYQYAK|EN 0.064 . ____________________________^_________________

  • Fasta :-

    >PKNH_0413500 ATGAAGGCTCGCCTTTCCTTAATACTAATTTTATGTGCCGTGTGCAGGGAATGTACAGTG CGATGCACGGATACTGCTATAAATCAAGGACAGGATGCAGTACAACAACCAGAAGAGAGC TTAAGTCAGGATGCATCTGATAACTCTCTACCGGGCCAACCGGTAGCCTCACCAAATGGA GCGGACCAAGCAGAAGTTTCCCAACTCCAAGAAGGTGCTGTGGAAAGTTCTAGCAATTCT GCTGATGCTTCTAACCCTAATGCAAATGCAGATGTGACAGACGTTGAAGGAGAAAAGGCG GCAACTCCCTCCGAAGGCAGCAAAGAGGGGATGCAAGTAAAATCATCACTTCTGAAAGGA TACAAGGGAGTGAAAGTGACAGGGCCATGTAGCGCAAGCTTTCTAGTTTTCTTCGCCCCG TATCTGTTTATCGATGTGGACGCGGACAGTAGTAACATTTACCTGGGAACTGACTTGAAC GACCTAGAAATCACAGAAAAGATGGGTAAAGGAAAAGACGAAAAAAATAAATGCCAAGAA GGAAAGACATTCAAATTTGTTGCGTTCGTTGTAAATGATCACTTGACTATTAAATGGAAG GTGTACGACTCGGAAGATCAGACACCAACCCCAAATAGCAATGTGGAAATGAAAAAGTAC AAAGTCAAAAACCTAAGTGGTGAATTTACCTCTGTGCAAGTACACAGCACGATCCAACAA AACGGCTCCAACGTGTTCGAAAGTAAAAACTATGCCTTAAGTAACGACATGCCTGAAAAA TGTGATGCCATAGCTGCCAACTGCTTCCTCAGTGGAAGCGTGTATATAGAAAAGTGTTAC AGATGCACTCTTAAAATGGAGAAAGTGAATTCGTCCGATGTCTGCTACAATTACATTCCC AAAGTGGATACACCTACAAAGGAGGAAGCCCCAATATACGACCACTACTTGAAGAACTCC CCCAATTTGGGAGGCAGCACCTCCAATAAAAACATCGCTGATCAGGAAGGTGCCTCGACA ATAAACGCAGCGGGTGGTGTCCACGAATCCGTGCTACAGGGACAGGAAGCTGAGGAGAAG GAAGTGAAGGATGTTGCCGTGAAAGCTGCTCCTGAAGGCAATCCAGTGGTCACGGAAGAA AAAGCAGATGGACAAGTTTCTACAGAAGTTCCTTCTTTACCGGAGGCGAAAGTAACCGAA GTCCAAAGCGCGGGTACAACGGGAGGTGAACAGCCAGTACCAGCAGTACCGGAAGGACAA GCGGGAGCACCGAGCACGACGGGACCAGATAGCACAAGTGGCACTTCACCCCAACCACCC GTGGTAAGCACCCAACTATCACATGTCCTAAAGTACATTAAAAAGAATAAGGTAAAAATG AACCTGATTACTTACAAAAATAATGAAGCTGTCAGCAGTGGACACGACTGCTCGAGATCC TACTCGGTGAATCCAGACAAGTACGAAGAGTGCGTGAAGATATGCGAAGCCAACTGGAGC AAATGTGAAAATGATGCAGTGCCAGGATTCTGTTTATACCAATATGCAAAAGAAAATGAG TGTTTCTTCTGCTATGTATAA
  • Download Fasta

  • Fasta :-

    MKARLSLILILCAVCRECTVRCTDTAINQGQDAVQQPEESLSQDASDNSLPGQPVASPNG ADQAEVSQLQEGAVESSSNSADASNPNANADVTDVEGEKAATPSEGSKEGMQVKSSLLKG YKGVKVTGPCSASFLVFFAPYLFIDVDADSSNIYLGTDLNDLEITEKMGKGKDEKNKCQE GKTFKFVAFVVNDHLTIKWKVYDSEDQTPTPNSNVEMKKYKVKNLSGEFTSVQVHSTIQQ NGSNVFESKNYALSNDMPEKCDAIAANCFLSGSVYIEKCYRCTLKMEKVNSSDVCYNYIP KVDTPTKEEAPIYDHYLKNSPNLGGSTSNKNIADQEGASTINAAGGVHESVLQGQEAEEK EVKDVAVKAAPEGNPVVTEEKADGQVSTEVPSLPEAKVTEVQSAGTTGGEQPVPAVPEGQ AGAPSTTGPDSTSGTSPQPPVVSTQLSHVLKYIKKNKVKMNLITYKNNEAVSSGHDCSRS YSVNPDKYEECVKICEANWSKCENDAVPGFCLYQYAKENECFFCYV

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0413500226 SVKNLSGEFT0.993unspPKNH_0413500431 STGPDSTSGT0.996unsp

PK2_0640c      PKH_041240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India