PKNH_0516400 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0516400OTHER0.9998910.0000690.000041
No Results

  • Fasta :-

    >PKNH_0516400 MAEKESRDGEICLRGANRLDGTPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKCHA RLNFLRPNVEVVSDDNVIVKDENNYYLYEDSWIENFNENGYSVFGLDLQGHGGSDGFEKL SYHVREFDDFAYDVMQYIRNIQDSMNSSDVGDSRKGDDANLPLRDDRICGRKLLPTYVVG VSLGGSIALRMLQILGKSSNRIEDAGLNIRGCISISPMITVEKLPSRNSFLFQYVYLPLC KLLADWFPRVRLISKYPYKKCPYIKYFIEYDKNRPKGAITCRFGYELLNTIENIDNDIKY MPKDIPVLIIHSKEDVICSYDGSLSFYNRLDVNNKEMHTLEDMEHTVLWEPGNEEVQKKI VDWIKGLPSSGVGSMSKDGHKIRGEEQRIEEEHRVGAD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0516400.fa Sequence name : PKNH_0516400 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 3.653 CoefTot : 0.141 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.641 0.307 0.699 MesoH : -0.365 0.536 -0.243 0.224 MuHd_075 : 38.597 18.474 9.655 7.002 MuHd_095 : 38.103 16.191 8.678 7.814 MuHd_100 : 47.684 20.314 11.826 9.623 MuHd_105 : 45.971 19.077 12.544 9.134 Hmax_075 : -4.200 3.237 -1.233 1.003 Hmax_095 : -0.525 3.850 -1.025 1.951 Hmax_100 : 4.200 7.900 0.817 3.010 Hmax_105 : 11.200 10.150 3.505 3.418 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5069 0.4931 DFMC : 0.6015 0.3985
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 PKNH_0516400 MAEKESRDGEICLRGANRLDGTPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKCHARLNFLRPNVEVVSDDNVIVK 80 DENNYYLYEDSWIENFNENGYSVFGLDLQGHGGSDGFEKLSYHVREFDDFAYDVMQYIRNIQDSMNSSDVGDSRKGDDAN 160 LPLRDDRICGRKLLPTYVVGVSLGGSIALRMLQILGKSSNRIEDAGLNIRGCISISPMITVEKLPSRNSFLFQYVYLPLC 240 KLLADWFPRVRLISKYPYKKCPYIKYFIEYDKNRPKGAITCRFGYELLNTIENIDNDIKYMPKDIPVLIIHSKEDVICSY 320 DGSLSFYNRLDVNNKEMHTLEDMEHTVLWEPGNEEVQKKIVDWIKGLPSSGVGSMSKDGHKIRGEEQRIEEEHRVGAD 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0516400 4 ---MAEK|ES 0.068 . PKNH_0516400 7 MAEKESR|DG 0.124 . PKNH_0516400 14 DGEICLR|GA 0.089 . PKNH_0516400 18 CLRGANR|LD 0.096 . PKNH_0516400 24 RLDGTPK|HD 0.068 . PKNH_0516400 31 HDSFLNK|DG 0.073 . PKNH_0516400 37 KDGLLLR|SY 0.128 . PKNH_0516400 44 SYGWLVK|NA 0.067 . PKNH_0516400 57 ILIHGIK|CH 0.055 . PKNH_0516400 61 GIKCHAR|LN 0.091 . PKNH_0516400 66 ARLNFLR|PN 0.094 . PKNH_0516400 80 DDNVIVK|DE 0.067 . PKNH_0516400 119 GSDGFEK|LS 0.067 . PKNH_0516400 125 KLSYHVR|EF 0.127 . PKNH_0516400 139 DVMQYIR|NI 0.103 . PKNH_0516400 154 SDVGDSR|KG 0.085 . PKNH_0516400 155 DVGDSRK|GD 0.107 . PKNH_0516400 164 DANLPLR|DD 0.096 . PKNH_0516400 167 LPLRDDR|IC 0.248 . PKNH_0516400 171 DDRICGR|KL 0.078 . PKNH_0516400 172 DRICGRK|LL 0.078 . PKNH_0516400 190 GGSIALR|ML 0.109 . PKNH_0516400 197 MLQILGK|SS 0.102 . PKNH_0516400 201 LGKSSNR|IE 0.098 . PKNH_0516400 210 DAGLNIR|GC 0.080 . PKNH_0516400 223 PMITVEK|LP 0.058 . PKNH_0516400 227 VEKLPSR|NS 0.073 . PKNH_0516400 241 VYLPLCK|LL 0.057 . PKNH_0516400 249 LADWFPR|VR 0.071 . PKNH_0516400 251 DWFPRVR|LI 0.082 . PKNH_0516400 255 RVRLISK|YP 0.066 . PKNH_0516400 259 ISKYPYK|KC 0.062 . PKNH_0516400 260 SKYPYKK|CP 0.093 . PKNH_0516400 265 KKCPYIK|YF 0.073 . PKNH_0516400 272 YFIEYDK|NR 0.055 . PKNH_0516400 274 IEYDKNR|PK 0.132 . PKNH_0516400 276 YDKNRPK|GA 0.084 . PKNH_0516400 282 KGAITCR|FG 0.115 . PKNH_0516400 299 NIDNDIK|YM 0.059 . PKNH_0516400 303 DIKYMPK|DI 0.072 . PKNH_0516400 313 VLIIHSK|ED 0.058 . PKNH_0516400 329 SLSFYNR|LD 0.090 . PKNH_0516400 335 RLDVNNK|EM 0.070 . PKNH_0516400 358 GNEEVQK|KI 0.080 . PKNH_0516400 359 NEEVQKK|IV 0.191 . PKNH_0516400 365 KIVDWIK|GL 0.070 . PKNH_0516400 377 GVGSMSK|DG 0.076 . PKNH_0516400 381 MSKDGHK|IR 0.070 . PKNH_0516400 383 KDGHKIR|GE 0.140 . PKNH_0516400 388 IRGEEQR|IE 0.128 . PKNH_0516400 394 RIEEEHR|VG 0.082 . ____________________________^_________________

  • Fasta :-

    >PKNH_0516400 ATGGCCGAAAAGGAATCGCGCGATGGAGAAATATGCTTGAGGGGGGCGAATCGGCTTGAT GGAACACCAAAACATGATTCATTCCTTAATAAGGATGGACTATTATTACGGTCATACGGG TGGTTAGTGAAAAACGCTATAGGTATTATAATATTAATTCATGGAATTAAGTGTCATGCG AGACTGAACTTTTTAAGACCCAATGTAGAGGTAGTAAGCGACGATAACGTTATAGTAAAG GATGAAAATAATTACTACCTTTATGAAGACAGTTGGATAGAGAATTTTAATGAAAATGGA TATTCCGTCTTCGGATTAGATCTACAGGGTCATGGGGGATCGGATGGATTTGAGAAACTC AGTTATCATGTAAGGGAGTTTGACGATTTCGCCTATGATGTAATGCAGTATATTAGGAAC ATTCAGGATAGCATGAATAGTTCCGATGTGGGTGATTCGCGGAAAGGGGACGATGCTAAT TTACCACTTCGGGATGACAGAATATGTGGGAGGAAACTTCTTCCCACTTACGTAGTCGGT GTGTCCCTGGGGGGAAGTATCGCTTTAAGGATGTTACAAATATTAGGGAAGTCATCAAAT AGGATAGAAGATGCAGGACTGAATATCCGCGGGTGCATTTCGATATCTCCGATGATAACT GTTGAGAAGTTACCATCCAGAAATTCGTTCCTATTTCAGTACGTTTACCTCCCATTGTGC AAGTTACTTGCTGATTGGTTTCCAAGGGTGAGACTTATTTCCAAGTATCCATATAAGAAG TGTCCGTATATTAAATATTTTATTGAGTATGATAAAAATCGACCTAAGGGGGCAATTACA TGCAGATTTGGCTATGAGCTCCTGAATACCATTGAAAACATAGACAATGACATAAAATAC ATGCCCAAAGATATTCCTGTGTTGATTATTCATTCTAAGGAGGATGTTATATGCTCCTAT GACGGATCCCTGTCGTTTTACAACAGACTCGATGTAAACAATAAAGAAATGCACACACTG GAGGACATGGAACATACCGTCCTTTGGGAACCCGGAAATGAGGAAGTTCAGAAAAAAATC GTGGATTGGATTAAGGGTCTGCCGTCGTCAGGAGTGGGTAGCATGTCGAAGGATGGGCAT AAGATCCGGGGGGAGGAGCAGCGCATCGAAGAGGAGCATCGCGTTGGGGCTGATTAG
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  • Fasta :-

    MAEKESRDGEICLRGANRLDGTPKHDSFLNKDGLLLRSYGWLVKNAIGIIILIHGIKCHA RLNFLRPNVEVVSDDNVIVKDENNYYLYEDSWIENFNENGYSVFGLDLQGHGGSDGFEKL SYHVREFDDFAYDVMQYIRNIQDSMNSSDVGDSRKGDDANLPLRDDRICGRKLLPTYVVG VSLGGSIALRMLQILGKSSNRIEDAGLNIRGCISISPMITVEKLPSRNSFLFQYVYLPLC KLLADWFPRVRLISKYPYKKCPYIKYFIEYDKNRPKGAITCRFGYELLNTIENIDNDIKY MPKDIPVLIIHSKEDVICSYDGSLSFYNRLDVNNKEMHTLEDMEHTVLWEPGNEEVQKKI VDWIKGLPSSGVGSMSKDGHKIRGEEQRIEEEHRVGAD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_0516400153 SDVGDSRKGD0.996unsp

PK9_3430w      PKH_052800      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India