PKNH_0615300 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0615300OTHER0.9998760.0000820.000042
No Results

  • Fasta :-

    >PKNH_0615300 MMNDANGGGAVTLPEAPKYILGLEGSANKLGVSIINSDMQILVNMRRTYVSEIGCGFIPR QINAHHKYYIIEMIKDCLNKLKIRMTDIYLICYTKGPGIGSALYIAYNISKFFSLLFNIP VIGVNHCIAHIEMGIFITKLYHPIILYVSGSNTQIIYFNNHKKRYEIIGETLDIAIGNVI DRSARILRISNSPSPGYNVEILARKKYLLNLEKKKKKKKKKNGSIVVSVVGEDATTGELH SGLVPEKEQKDTIPPANNQTNNSNGTSRSNAPMRGDPCDYTELLFFPYTIKGMDISFSGY DYYVSKYFSKYITKRGKKGKGGDGGKAPLDDKNAPKRKKRQGREDANDLKEEKDDDGEGD SDGGCASGGGANDSNGNDGPPNDGTAPGGTQHFPQPNLSIHTGVQGSSYYEENVICSISG KKNYGEGDHYAEEEDGAIETESDFFDSSSDEGAAEGGKNEGDLRNPPSQTQPHNGTHLTD EEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKMAKQKN IKIGFMDHSYCVDNGAMIAYTGYLEYLNSKNREIYNFNNISIHQRYRTDDVLVTWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0615300.fa Sequence name : PKNH_0615300 Sequence length : 596 VALUES OF COMPUTED PARAMETERS Coef20 : 2.962 CoefTot : -0.134 ChDiff : 0 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.612 0.156 0.644 MesoH : 0.494 0.892 -0.088 0.453 MuHd_075 : 18.839 11.356 3.862 2.889 MuHd_095 : 27.298 13.782 7.085 4.354 MuHd_100 : 26.529 13.101 6.572 3.891 MuHd_105 : 16.170 6.889 3.842 1.837 Hmax_075 : 7.175 3.150 -0.964 2.424 Hmax_095 : 12.950 7.438 0.944 3.649 Hmax_100 : 15.000 10.100 1.506 4.050 Hmax_105 : 6.800 4.700 -0.618 2.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9559 0.0441 DFMC : 0.9418 0.0582
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 596 PKNH_0615300 MMNDANGGGAVTLPEAPKYILGLEGSANKLGVSIINSDMQILVNMRRTYVSEIGCGFIPRQINAHHKYYIIEMIKDCLNK 80 LKIRMTDIYLICYTKGPGIGSALYIAYNISKFFSLLFNIPVIGVNHCIAHIEMGIFITKLYHPIILYVSGSNTQIIYFNN 160 HKKRYEIIGETLDIAIGNVIDRSARILRISNSPSPGYNVEILARKKYLLNLEKKKKKKKKKNGSIVVSVVGEDATTGELH 240 SGLVPEKEQKDTIPPANNQTNNSNGTSRSNAPMRGDPCDYTELLFFPYTIKGMDISFSGYDYYVSKYFSKYITKRGKKGK 320 GGDGGKAPLDDKNAPKRKKRQGREDANDLKEEKDDDGEGDSDGGCASGGGANDSNGNDGPPNDGTAPGGTQHFPQPNLSI 400 HTGVQGSSYYEENVICSISGKKNYGEGDHYAEEEDGAIETESDFFDSSSDEGAAEGGKNEGDLRNPPSQTQPHNGTHLTD 480 EEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMIAY 560 TGYLEYLNSKNREIYNFNNISIHQRYRTDDVLVTWR 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................P............................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0615300 18 TLPEAPK|YI 0.074 . PKNH_0615300 29 LEGSANK|LG 0.054 . PKNH_0615300 46 QILVNMR|RT 0.082 . PKNH_0615300 47 ILVNMRR|TY 0.111 . PKNH_0615300 60 GCGFIPR|QI 0.111 . PKNH_0615300 67 QINAHHK|YY 0.078 . PKNH_0615300 75 YIIEMIK|DC 0.061 . PKNH_0615300 80 IKDCLNK|LK 0.060 . PKNH_0615300 82 DCLNKLK|IR 0.061 . PKNH_0615300 84 LNKLKIR|MT 0.120 . PKNH_0615300 95 YLICYTK|GP 0.064 . PKNH_0615300 111 IAYNISK|FF 0.069 . PKNH_0615300 139 MGIFITK|LY 0.066 . PKNH_0615300 162 IYFNNHK|KR 0.059 . PKNH_0615300 163 YFNNHKK|RY 0.159 . PKNH_0615300 164 FNNHKKR|YE 0.405 . PKNH_0615300 182 IGNVIDR|SA 0.187 . PKNH_0615300 185 VIDRSAR|IL 0.258 . PKNH_0615300 188 RSARILR|IS 0.188 . PKNH_0615300 204 NVEILAR|KK 0.068 . PKNH_0615300 205 VEILARK|KY 0.063 . PKNH_0615300 206 EILARKK|YL 0.082 . PKNH_0615300 213 YLLNLEK|KK 0.053 . PKNH_0615300 214 LLNLEKK|KK 0.100 . PKNH_0615300 215 LNLEKKK|KK 0.098 . PKNH_0615300 216 NLEKKKK|KK 0.112 . PKNH_0615300 217 LEKKKKK|KK 0.118 . PKNH_0615300 218 EKKKKKK|KK 0.114 . PKNH_0615300 219 KKKKKKK|KK 0.135 . PKNH_0615300 220 KKKKKKK|KN 0.216 . PKNH_0615300 221 KKKKKKK|NG 0.169 . PKNH_0615300 247 SGLVPEK|EQ 0.059 . PKNH_0615300 250 VPEKEQK|DT 0.072 . PKNH_0615300 268 NSNGTSR|SN 0.172 . PKNH_0615300 274 RSNAPMR|GD 0.107 . PKNH_0615300 291 FFPYTIK|GM 0.063 . PKNH_0615300 306 YDYYVSK|YF 0.080 . PKNH_0615300 310 VSKYFSK|YI 0.077 . PKNH_0615300 314 FSKYITK|RG 0.059 . PKNH_0615300 315 SKYITKR|GK 0.279 . PKNH_0615300 317 YITKRGK|KG 0.062 . PKNH_0615300 318 ITKRGKK|GK 0.334 . PKNH_0615300 320 KRGKKGK|GG 0.112 . PKNH_0615300 326 KGGDGGK|AP 0.057 . PKNH_0615300 332 KAPLDDK|NA 0.055 . PKNH_0615300 336 DDKNAPK|RK 0.063 . PKNH_0615300 337 DKNAPKR|KK 0.276 . PKNH_0615300 338 KNAPKRK|KR 0.103 . PKNH_0615300 339 NAPKRKK|RQ 0.098 . PKNH_0615300 340 APKRKKR|QG 0.589 *ProP* PKNH_0615300 343 RKKRQGR|ED 0.315 . PKNH_0615300 350 EDANDLK|EE 0.057 . PKNH_0615300 353 NDLKEEK|DD 0.071 . PKNH_0615300 421 ICSISGK|KN 0.082 . PKNH_0615300 422 CSISGKK|NY 0.110 . PKNH_0615300 458 GAAEGGK|NE 0.062 . PKNH_0615300 464 KNEGDLR|NP 0.067 . PKNH_0615300 483 HLTDEEK|RK 0.058 . PKNH_0615300 484 LTDEEKR|KI 0.134 . PKNH_0615300 485 TDEEKRK|IQ 0.085 . PKNH_0615300 506 LIEITER|AI 0.074 . PKNH_0615300 514 IAFTNSK|EV 0.077 . PKNH_0615300 533 FLQNMMK|KM 0.064 . PKNH_0615300 534 LQNMMKK|MA 0.154 . PKNH_0615300 537 MMKKMAK|QK 0.079 . PKNH_0615300 539 KKMAKQK|NI 0.096 . PKNH_0615300 542 AKQKNIK|IG 0.059 . PKNH_0615300 570 LEYLNSK|NR 0.057 . PKNH_0615300 572 YLNSKNR|EI 0.094 . PKNH_0615300 585 NISIHQR|YR 0.108 . PKNH_0615300 587 SIHQRYR|TD 0.101 . PKNH_0615300 596 DVLVTWR|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PKNH_0615300 ATGATGAATGACGCCAACGGGGGGGGTGCCGTCACCCTTCCGGAAGCACCCAAGTACATC CTTGGGCTGGAAGGGAGTGCGAACAAATTGGGTGTGAGTATCATAAATAGCGACATGCAA ATTCTGGTAAACATGAGAAGAACATATGTCTCTGAAATTGGCTGTGGATTTATCCCGAGG CAAATTAATGCGCACCACAAGTACTACATCATCGAGATGATTAAAGATTGTCTCAATAAA TTGAAGATAAGGATGACAGACATATATTTAATATGCTACACGAAAGGTCCAGGAATAGGA TCCGCCCTGTACATTGCCTACAACATAAGCAAATTTTTTTCTCTCCTATTTAATATTCCT GTTATTGGAGTCAACCACTGTATTGCCCATATCGAAATGGGTATTTTCATAACCAAGCTT TATCACCCCATCATTTTATACGTCAGTGGAAGCAACACACAAATTATTTACTTCAACAAT CATAAGAAGAGGTACGAAATTATCGGGGAGACTTTGGACATAGCCATTGGAAATGTCATA GACAGATCTGCCAGGATTCTCAGAATTTCCAATTCTCCTTCGCCTGGATATAATGTGGAA ATTTTGGCTAGGAAGAAATATCTGCTAAATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAATGGCTCGATAGTTGTTTCAGTTGTGGGCGAGGATGCAACAACTGGGGAACTACAT AGTGGCCTTGTTCCGGAGAAGGAACAGAAGGACACCATCCCTCCGGCGAATAACCAGACA AATAATTCAAACGGGACAAGTAGGTCCAATGCACCAATGAGGGGGGACCCGTGTGACTAC ACGGAACTGCTCTTCTTCCCCTACACCATAAAAGGGATGGACATCTCGTTCAGCGGGTAC GACTATTACGTGAGTAAATATTTCTCCAAGTACATAACCAAGCGAGGCAAAAAGGGTAAG GGCGGTGATGGGGGGAAGGCACCACTGGACGATAAGAACGCTCCGAAAAGGAAGAAGCGG CAAGGCAGGGAGGATGCGAACGACCTCAAGGAAGAGAAAGATGATGATGGAGAGGGTGAC TCAGACGGAGGATGCGCAAGCGGAGGCGGCGCAAATGATAGCAACGGAAATGATGGTCCT CCGAATGATGGCACTGCGCCCGGCGGCACGCAACACTTTCCACAGCCCAACTTGAGCATT CACACAGGTGTGCAGGGTAGCTCTTACTACGAAGAGAATGTCATCTGTAGTATCAGCGGG AAGAAGAACTACGGAGAAGGCGATCATTACGCGGAGGAAGAAGACGGCGCTATCGAGACG GAGAGCGACTTTTTTGACTCCAGTTCGGATGAAGGCGCAGCGGAGGGGGGCAAAAATGAG GGAGACCTTAGGAACCCCCCCAGTCAAACACAACCACACAATGGAACCCACCTAACAGAT GAAGAAAAGCGGAAAATACAAATCTGCTACAGTTTGCAACACCACATATTTAGTATGCTC ATCGAAATCACCGAACGAGCTATCGCCTTCACGAATAGCAAGGAGGTCATCATCGTGGGG GGAGTTGGATGCAACGTTTTCCTACAGAACATGATGAAGAAAATGGCAAAACAGAAAAAT ATCAAAATTGGATTTATGGATCACAGCTATTGTGTTGACAACGGTGCCATGATTGCCTAC ACCGGGTACCTTGAATACTTGAACAGCAAAAATAGGGAAATCTACAACTTCAATAATATA AGTATCCACCAGAGGTACCGCACAGACGACGTGCTCGTGACGTGGAGGTAG
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  • Fasta :-

    MMNDANGGGAVTLPEAPKYILGLEGSANKLGVSIINSDMQILVNMRRTYVSEIGCGFIPR QINAHHKYYIIEMIKDCLNKLKIRMTDIYLICYTKGPGIGSALYIAYNISKFFSLLFNIP VIGVNHCIAHIEMGIFITKLYHPIILYVSGSNTQIIYFNNHKKRYEIIGETLDIAIGNVI DRSARILRISNSPSPGYNVEILARKKYLLNLEKKKKKKKKKNGSIVVSVVGEDATTGELH SGLVPEKEQKDTIPPANNQTNNSNGTSRSNAPMRGDPCDYTELLFFPYTIKGMDISFSGY DYYVSKYFSKYITKRGKKGKGGDGGKAPLDDKNAPKRKKRQGREDANDLKEEKDDDGEGD SDGGCASGGGANDSNGNDGPPNDGTAPGGTQHFPQPNLSIHTGVQGSSYYEENVICSISG KKNYGEGDHYAEEEDGAIETESDFFDSSSDEGAAEGGKNEGDLRNPPSQTQPHNGTHLTD EEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNVFLQNMMKKMAKQKN IKIGFMDHSYCVDNGAMIAYTGYLEYLNSKNREIYNFNNISIHQRYRTDDVLVTWR

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PK10_3110c      PKH_061490      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India