PKNH_0617300 | DER1-like protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0617300OTHER0.9999890.0000040.000007
No Results

  • Fasta :-

    >PKNH_0617300 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFN FMYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSSPGSYLYFITIQCTSLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRPVSDSR TPESSGPTRRVFIGRGVRLGDS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0617300.fa Sequence name : PKNH_0617300 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.055 CoefTot : 0.000 ChDiff : 10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 2.588 0.470 0.798 MesoH : 0.927 1.103 -0.034 0.488 MuHd_075 : 13.767 7.582 2.344 1.037 MuHd_095 : 23.035 13.470 5.161 3.803 MuHd_100 : 12.738 8.470 3.145 3.290 MuHd_105 : 12.497 9.770 4.769 3.611 Hmax_075 : 3.400 6.200 -1.758 2.850 Hmax_095 : 9.362 7.525 -0.512 3.850 Hmax_100 : 1.900 2.100 -2.080 2.740 Hmax_105 : 10.700 10.383 1.628 4.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9800 0.0200 DFMC : 0.9888 0.0112
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 PKNH_0617300 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFNFMYVGKFSLSWVFFMSLLAQ 80 FSSSLEKNAVFSSPGSYLYFITIQCTSLSLISILFYWPRGYPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFA 160 LIFLHLIMGQSLWVDIMGLMSGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRPVSDSR 240 TPESSGPTRRVFIGRGVRLGDS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0617300 18 NLPNVTK|YL 0.070 . PKNH_0617300 56 NNYQLWR|IF 0.085 . PKNH_0617300 66 NFMYVGK|FS 0.066 . PKNH_0617300 87 FSSSLEK|NA 0.066 . PKNH_0617300 119 ILFYWPR|GY 0.095 . PKNH_0617300 138 IIYYWSR|RE 0.076 . PKNH_0617300 139 IYYWSRR|EA 0.193 . PKNH_0617300 153 IYFFTVK|GY 0.059 . PKNH_0617300 189 HIYYFFR|EL 0.107 . PKNH_0617300 194 FRELLPR|EG 0.102 . PKNH_0617300 203 GPNLLEK|TP 0.067 . PKNH_0617300 206 LLEKTPK|IF 0.086 . PKNH_0617300 210 TPKIFDK|IM 0.079 . PKNH_0617300 214 FDKIMMK|LR 0.060 . PKNH_0617300 216 KIMMKLR|EF 0.090 . PKNH_0617300 219 MKLREFR|LN 0.245 . PKNH_0617300 225 RLNQGIR|GN 0.091 . PKNH_0617300 230 IRGNFSR|YG 0.110 . PKNH_0617300 234 FSRYGYR|PV 0.168 . PKNH_0617300 240 RPVSDSR|TP 0.094 . PKNH_0617300 249 ESSGPTR|RV 0.172 . PKNH_0617300 250 SSGPTRR|VF 0.148 . PKNH_0617300 255 RRVFIGR|GV 0.182 . PKNH_0617300 258 FIGRGVR|LG 0.141 . ____________________________^_________________

  • Fasta :-

    >PKNH_0617300 ATGGATATTTCAGGGCCGGAGGTTTGGTATGGAAACTTACCAAATGTAACCAAGTATTTA ATAACCCTAATTTTTTTAGTGACCCTTCTCATAACATGCAACCTCCTAAATGTTGTGTAC CTTTTACTGGATTGGAATTTGATATATAATAATTACCAACTGTGGAGAATATTTTTTAAC TTTATGTACGTGGGGAAATTTTCGCTTTCTTGGGTTTTTTTTATGTCTTTATTGGCCCAG TTTTCTTCCTCCCTCGAGAAGAACGCAGTGTTTTCCAGCCCAGGGTCATACTTGTACTTC ATCACCATTCAGTGCACCTCCTTATCGCTCATAAGCATTTTGTTCTATTGGCCCAGAGGC TACCCCTTCTTGGGAAACTCCCTTCTGTTTGCCATCATTTACTACTGGTCCAGGAGGGAG GCGTGGAGTCAAGTGTCCATTTACTTCTTCACGGTGAAAGGCTACCAGTTACCCTTCGCA CTTATTTTCCTTCACCTTATCATGGGACAATCCCTCTGGGTGGACATTATGGGTCTCATG TCCGGTCATATCTACTACTTTTTTAGGGAGCTTCTTCCGAGGGAAGGAGGACCAAATTTG CTCGAAAAGACGCCCAAGATTTTCGATAAAATCATGATGAAGCTCAGGGAGTTTCGCCTA AATCAGGGAATAAGGGGAAACTTTTCGAGGTACGGGTACAGACCGGTGAGCGACTCCAGA ACGCCTGAAAGTTCAGGGCCCACTAGGAGAGTCTTCATTGGACGGGGAGTCAGATTGGGT GACAGTTGA
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  • Fasta :-

    MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFN FMYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSSPGSYLYFITIQCTSLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRPVSDSR TPESSGPTRRVFIGRGVRLGDS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_0617300237 SYRPVSDSRT0.997unsp

PK10_3320c      PKH_061690      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India