PKNH_0717200 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0717200OTHER0.9966650.0028290.000506
No Results

  • Fasta :-

    >PKNH_0717200 MNIWLHTYTLDVPFFLKNVRHTGIEVFGSEYTFSMDGITTCKPKRSTIGKYCKSYELTFV EITYAQFAEILNALGKIYRPNTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNRNAPIGVTSKSHKSFPTALPS GLTANLAGNLAGNSTGNSTNSLLSNLPPCLTSGFPPLHFNRQSDDYCNRFCSPSSIYVIP YSPYENDSCIVQNVSYGENTFSGPMDSLPDEANKGFFPNGQFRTVYSISTNDSFSMA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0717200.fa Sequence name : PKNH_0717200 Sequence length : 297 VALUES OF COMPUTED PARAMETERS Coef20 : 4.075 CoefTot : -1.256 ChDiff : 4 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.065 0.906 0.075 0.467 MesoH : -0.212 0.204 -0.295 0.163 MuHd_075 : 24.143 16.926 6.730 4.996 MuHd_095 : 17.374 14.578 7.172 4.748 MuHd_100 : 20.813 18.814 8.389 5.775 MuHd_105 : 25.790 19.900 8.632 6.012 Hmax_075 : 19.600 17.000 3.194 6.592 Hmax_095 : 15.700 13.000 -0.105 6.670 Hmax_100 : 15.700 16.800 2.646 6.670 Hmax_105 : 8.800 21.117 3.537 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8658 0.1342 DFMC : 0.8644 0.1356
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 297 PKNH_0717200 MNIWLHTYTLDVPFFLKNVRHTGIEVFGSEYTFSMDGITTCKPKRSTIGKYCKSYELTFVEITYAQFAEILNALGKIYRP 80 NTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLFGSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNR 160 NAPIGVTSKSHKSFPTALPSGLTANLAGNLAGNSTGNSTNSLLSNLPPCLTSGFPPLHFNRQSDDYCNRFCSPSSIYVIP 240 YSPYENDSCIVQNVSYGENTFSGPMDSLPDEANKGFFPNGQFRTVYSISTNDSFSMA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0717200 17 DVPFFLK|NV 0.068 . PKNH_0717200 20 FFLKNVR|HT 0.101 . PKNH_0717200 42 DGITTCK|PK 0.057 . PKNH_0717200 44 ITTCKPK|RS 0.064 . PKNH_0717200 45 TTCKPKR|ST 0.385 . PKNH_0717200 50 KRSTIGK|YC 0.111 . PKNH_0717200 53 TIGKYCK|SY 0.089 . PKNH_0717200 76 ILNALGK|IY 0.068 . PKNH_0717200 79 ALGKIYR|PN 0.087 . PKNH_0717200 88 TYNFVCK|NC 0.075 . PKNH_0717200 104 FELLSGK|RL 0.058 . PKNH_0717200 105 ELLSGKR|LF 0.098 . PKNH_0717200 115 TFMIYSR|LG 0.068 . PKNH_0717200 118 IYSRLGK|LF 0.131 . PKNH_0717200 124 KLFGSFK|NL 0.060 . PKNH_0717200 142 ELSGNDK|EM 0.060 . PKNH_0717200 150 MYVYALK|LS 0.056 . PKNH_0717200 153 YALKLSK|SI 0.071 . PKNH_0717200 157 LSKSIIR|RN 0.083 . PKNH_0717200 158 SKSIIRR|NR 0.146 . PKNH_0717200 160 SIIRRNR|NA 0.366 . PKNH_0717200 169 PIGVTSK|SH 0.069 . PKNH_0717200 172 VTSKSHK|SF 0.127 . PKNH_0717200 221 PPLHFNR|QS 0.106 . PKNH_0717200 229 SDDYCNR|FC 0.096 . PKNH_0717200 274 LPDEANK|GF 0.068 . PKNH_0717200 283 FPNGQFR|TV 0.136 . ____________________________^_________________

  • Fasta :-

    >PKNH_0717200 ATGAATATCTGGCTACACACTTACACTCTAGACGTTCCCTTTTTTCTGAAAAATGTGCGC CACACAGGAATCGAAGTCTTCGGGAGCGAGTACACCTTCTCCATGGACGGAATCACCACA TGCAAGCCGAAGAGGTCGACCATAGGGAAATACTGCAAGAGCTACGAACTGACCTTCGTG GAAATAACATACGCCCAATTTGCTGAAATTCTAAATGCCCTTGGAAAGATATACAGACCT AACACATACAACTTCGTGTGCAAAAACTGCAACCACTTTTGCGATGACTTGTTTGAATTG CTCAGTGGAAAGAGATTGTTTCATACATTTATGATTTATTCTCGTTTGGGAAAATTGTTC GGAAGCTTTAAGAACCTGGCCTTATGTGGGTACATCGACTCCATGGAGCTTTCCGGCAAT GACAAGGAGATGTACGTCTATGCGCTCAAACTGTCCAAGTCGATCATACGACGGAATAGG AATGCGCCCATCGGGGTTACGAGCAAATCACACAAAAGCTTCCCTACTGCCTTACCTTCC GGCTTGACGGCCAATTTGGCTGGCAATTTGGCGGGCAATTCGACGGGCAATTCGACGAAC AGCCTGCTCAGCAACTTGCCCCCCTGCCTAACGAGTGGCTTTCCTCCCCTCCATTTCAAC AGACAAAGCGACGACTATTGCAACCGCTTCTGTAGCCCGTCTTCCATATATGTCATCCCG TATTCCCCCTACGAGAATGACTCCTGCATTGTCCAAAATGTCTCCTATGGTGAGAATACC TTTAGCGGCCCCATGGACAGTTTACCTGATGAGGCGAACAAGGGATTTTTCCCTAACGGC CAATTCAGAACTGTTTATTCGATTAGCACGAATGACAGCTTTTCAATGGCATGA
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  • Fasta :-

    MNIWLHTYTLDVPFFLKNVRHTGIEVFGSEYTFSMDGITTCKPKRSTIGKYCKSYELTFV EITYAQFAEILNALGKIYRPNTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNRNAPIGVTSKSHKSFPTALPS GLTANLAGNLAGNSTGNSTNSLLSNLPPCLTSGFPPLHFNRQSDDYCNRFCSPSSIYVIP YSPYENDSCIVQNVSYGENTFSGPMDSLPDEANKGFFPNGQFRTVYSISTNDSFSMA

    No Results
    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0717200170 SVTSKSHKSF0.994unspPKNH_0717200242 SVIPYSPYEN0.996unsp

PK9_1780c      PKH_071640      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India