PKNH_0721100 | OTU domain-containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  protein deubiquitination      

_IDPredictionOTHERSPmTPCS_Position
PKNH_0721100OTHER0.9990240.0001140.000862
No Results

  • Fasta :-

    >PKNH_0721100 MELCCRGKLRDLRCRYMESSLRISESLQRDEQMETRLSMNMNIKSLASVLTDMQKLKRAE EMKRYSTFDRRISFLKRNKIINKTNYKSGRTILEKRLLAVDCELIKIPGDGNCLFRSISC NLFNEQKYHMYVRKRCVEHMLKCKDEFSIYFEEGTFQEYTEKMSQNGYWGDELCIKATAD AFDCVVYIITSTEDNWHLKYESKHRTQGEYKKCVFLAYTSPVHYDSFRLIRS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0721100.fa Sequence name : PKNH_0721100 Sequence length : 232 VALUES OF COMPUTED PARAMETERS Coef20 : 4.467 CoefTot : 0.000 ChDiff : 9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.182 1.529 0.103 0.474 MesoH : -1.552 -0.276 -0.650 0.024 MuHd_075 : 16.903 11.987 6.405 4.607 MuHd_095 : 28.704 12.947 6.348 5.000 MuHd_100 : 12.456 5.760 2.546 2.707 MuHd_105 : 6.736 1.103 2.749 1.129 Hmax_075 : -7.700 3.850 0.992 1.940 Hmax_095 : 3.500 9.300 1.612 2.180 Hmax_100 : -6.700 3.300 -1.760 1.150 Hmax_105 : -1.283 6.767 2.079 0.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8494 0.1506 DFMC : 0.9804 0.0196
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 232 PKNH_0721100 MELCCRGKLRDLRCRYMESSLRISESLQRDEQMETRLSMNMNIKSLASVLTDMQKLKRAEEMKRYSTFDRRISFLKRNKI 80 INKTNYKSGRTILEKRLLAVDCELIKIPGDGNCLFRSISCNLFNEQKYHMYVRKRCVEHMLKCKDEFSIYFEEGTFQEYT 160 EKMSQNGYWGDELCIKATADAFDCVVYIITSTEDNWHLKYESKHRTQGEYKKCVFLAYTSPVHYDSFRLIRS 240 ................................................................................ 80 ................................................................................ 160 ........................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0721100 6 -MELCCR|GK 0.071 . PKNH_0721100 8 ELCCRGK|LR 0.056 . PKNH_0721100 10 CCRGKLR|DL 0.122 . PKNH_0721100 13 GKLRDLR|CR 0.133 . PKNH_0721100 15 LRDLRCR|YM 0.119 . PKNH_0721100 22 YMESSLR|IS 0.078 . PKNH_0721100 29 ISESLQR|DE 0.082 . PKNH_0721100 36 DEQMETR|LS 0.074 . PKNH_0721100 44 SMNMNIK|SL 0.107 . PKNH_0721100 55 VLTDMQK|LK 0.062 . PKNH_0721100 57 TDMQKLK|RA 0.083 . PKNH_0721100 58 DMQKLKR|AE 0.189 . PKNH_0721100 63 KRAEEMK|RY 0.074 . PKNH_0721100 64 RAEEMKR|YS 0.160 . PKNH_0721100 70 RYSTFDR|RI 0.109 . PKNH_0721100 71 YSTFDRR|IS 0.109 . PKNH_0721100 76 RRISFLK|RN 0.067 . PKNH_0721100 77 RISFLKR|NK 0.187 . PKNH_0721100 79 SFLKRNK|II 0.058 . PKNH_0721100 83 RNKIINK|TN 0.074 . PKNH_0721100 87 INKTNYK|SG 0.081 . PKNH_0721100 90 TNYKSGR|TI 0.124 . PKNH_0721100 95 GRTILEK|RL 0.064 . PKNH_0721100 96 RTILEKR|LL 0.110 . PKNH_0721100 106 VDCELIK|IP 0.064 . PKNH_0721100 116 DGNCLFR|SI 0.216 . PKNH_0721100 127 NLFNEQK|YH 0.062 . PKNH_0721100 133 KYHMYVR|KR 0.083 . PKNH_0721100 134 YHMYVRK|RC 0.077 . PKNH_0721100 135 HMYVRKR|CV 0.464 . PKNH_0721100 142 CVEHMLK|CK 0.055 . PKNH_0721100 144 EHMLKCK|DE 0.073 . PKNH_0721100 162 FQEYTEK|MS 0.062 . PKNH_0721100 176 GDELCIK|AT 0.080 . PKNH_0721100 199 EDNWHLK|YE 0.090 . PKNH_0721100 203 HLKYESK|HR 0.073 . PKNH_0721100 205 KYESKHR|TQ 0.103 . PKNH_0721100 211 RTQGEYK|KC 0.057 . PKNH_0721100 212 TQGEYKK|CV 0.150 . PKNH_0721100 228 VHYDSFR|LI 0.092 . PKNH_0721100 231 DSFRLIR|S- 0.400 . ____________________________^_________________

  • Fasta :-

    >PKNH_0721100 ATGGAGCTCTGTTGCAGAGGGAAACTGAGGGACCTACGGTGCCGATACATGGAGAGCAGT TTGCGGATCTCCGAGAGTCTCCAGCGAGACGAGCAAATGGAAACAAGGCTGAGTATGAAT ATGAACATAAAAAGCTTAGCATCTGTGCTGACAGATATGCAGAAGCTAAAGCGTGCAGAA GAAATGAAACGATACAGTACCTTCGACAGAAGAATTTCCTTTTTAAAAAGAAACAAAATA ATAAATAAAACAAATTACAAATCTGGACGAACAATTTTGGAGAAGAGACTCTTGGCAGTT GATTGTGAACTAATTAAAATTCCTGGAGATGGTAACTGTCTGTTTCGATCCATTTCATGT AATTTATTCAACGAACAAAAGTATCATATGTATGTACGAAAAAGGTGCGTGGAGCATATG CTAAAATGTAAGGATGAGTTTTCCATTTATTTTGAAGAAGGCACCTTTCAGGAGTACACA GAAAAAATGTCTCAGAATGGCTACTGGGGGGATGAGTTATGTATCAAGGCCACAGCAGAT GCCTTCGATTGCGTTGTTTATATTATCACTTCCACTGAGGATAACTGGCATTTGAAATAC GAGTCTAAGCATCGAACCCAGGGGGAGTACAAGAAGTGCGTGTTTCTGGCCTACACCAGC CCCGTACATTACGACTCCTTTAGGCTCATTCGGTCGTGA
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  • Fasta :-

    MELCCRGKLRDLRCRYMESSLRISESLQRDEQMETRLSMNMNIKSLASVLTDMQKLKRAE EMKRYSTFDRRISFLKRNKIINKTNYKSGRTILEKRLLAVDCELIKIPGDGNCLFRSISC NLFNEQKYHMYVRKRCVEHMLKCKDEFSIYFEEGTFQEYTEKMSQNGYWGDELCIKATAD AFDCVVYIITSTEDNWHLKYESKHRTQGEYKKCVFLAYTSPVHYDSFRLIRS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_072110024 SSLRISESLQ0.991unspPKNH_072110066 SMKRYSTFDR0.997unsp

PK9_2170c      PKH_072030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India